RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NPFFO15130 113 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 PIN1P1O15428 100 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 NPC2P61916 151 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 PLGLB1Q02325 96 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 DCUN1D2Q6PH85 259 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 CCDC32Q9BV29 185 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 GOLGA3Q08378 1498 aa-0.93□□□□□ -2.56
SNX6-204ENST00000555541 SPTBN1Q01082 2364 aaKnown RBP-0.94□□□□□ -2.56
SNX6-204ENST00000555541 TRAV2A0A0B4J234 112 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 LOC107984640A0A0U1RRK4 108 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 PFDN1O60925 122 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 SLC25A5P05141 298 aaKnown RBP-0.94□□□□□ -2.56
SNX6-204ENST00000555541 NDUFA11Q86Y39 141 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 SLC35B3Q9H1N7 401 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 NPVFQ9HCQ7 196 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 METTL1Q9UBP6 276 aaKnown RBP-0.94□□□□□ -2.56
SNX6-204ENST00000555541 ERG28Q9UKR5 140 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 TRAPPC2LQ9UL33 140 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 HELZP42694 1942 aaKnown RBP-0.94□□□□□ -2.56
SNX6-204ENST00000555541 CCDC171Q6TFL3 1326 aa-0.94□□□□□ -2.56
SNX6-204ENST00000555541 C10orf71Q711Q0 1435 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 CAMSAP1Q5T5Y3 1602 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 TRAV1-2A0A0B4J238 106 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 HIST1H1BP16401 226 aaKnown RBP-0.95□□□□□ -2.56
SNX6-204ENST00000555541 RPL22P35268 128 aaKnown RBP-0.95□□□□□ -2.56
SNX6-204ENST00000555541 MRPS15P82914 257 aaKnown RBP-0.95□□□□□ -2.56
SNX6-204ENST00000555541 SPCS2Q15005 226 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 TMED4Q7Z7H5 227 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 SNX29P2Q8IUI4 249 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 DYNLRB2Q8TF09 96 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 MED31Q9Y3C7 131 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 CNOT1A5YKK6 2376 aaKnown RBP-0.95□□□□□ -2.56
SNX6-204ENST00000555541 A2MP01023 1474 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 ADGBQ8N7X0 1667 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 HYDINQ4G0P3 5121 aa-0.95□□□□□ -2.56
SNX6-204ENST00000555541 SVEP1Q4LDE5 3571 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 DOCK11Q5JSL3 2073 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 BCL9LQ86UU0 1499 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 TRAV12-3A0A0B4J271 114 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 FAM107AO95990 144 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 TCRAP04437 139 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 SERPINB1P30740 379 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 EDDM3BP56851 147 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 PSPHP78330 225 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 HAMPP81172 84 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 DCDP81605 110 aaKnown RBP-0.96□□□□□ -2.56
SNX6-204ENST00000555541 HSD17B12Q53GQ0 312 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 STX12Q86Y82 276 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 NOP16Q9Y3C1 178 aaKnown RBP-0.96□□□□□ -2.56
SNX6-204ENST00000555541 UBR4Q5T4S7 5183 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 MYH9P35579 1960 aaKnown RBP-0.96□□□□□ -2.56
SNX6-204ENST00000555541 KIDINS220Q9ULH0 1771 aa-0.96□□□□□ -2.56
SNX6-204ENST00000555541 YTHDC2Q9H6S0 1430 aaKnown RBP-0.97□□□□□ -2.56
SNX6-204ENST00000555541 PRKDCP78527 4128 aaKnown RBP-0.97□□□□□ -2.56
SNX6-204ENST00000555541 TANC2Q9HCD6 1990 aa-0.97□□□□□ -2.56
SNX6-204ENST00000555541 FAM92AA1XBS5 289 aa-0.97□□□□□ -2.56
SNX6-204ENST00000555541 M0R2P5 195 aa-0.97□□□□□ -2.56
SNX6-204ENST00000555541 BCE1O60756 84 aa-0.97□□□□□ -2.56
SNX6-204ENST00000555541 S100A3P33764 101 aa-0.97□□□□□ -2.56
SNX6-204ENST00000555541 RBM3P98179 157 aaKnown RBP-0.97□□□□□ -2.56
SNX6-204ENST00000555541 SPAG11AQ6PDA7 123 aa-0.97□□□□□ -2.56
SNX6-204ENST00000555541 SCN3BQ9NY72 215 aa-0.97□□□□□ -2.56
SNX6-204ENST00000555541 STOML2Q9UJZ1 356 aa-0.97□□□□□ -2.56
SNX6-204ENST00000555541 SPTA1P02549 2419 aa-0.97□□□□□ -2.57
SNX6-204ENST00000555541 CHD8Q9HCK8 2581 aa-0.98□□□□□ -2.57
SNX6-204ENST00000555541 KIAA1109Q2LD37 5005 aa-0.98□□□□□ -2.57
SNX6-204ENST00000555541 BORCS7-ASMTA0A0B4J1R7 106 aa-0.98□□□□□ -2.57
SNX6-204ENST00000555541 SMIM6P0DI80 62 aa-0.98□□□□□ -2.57
SNX6-204ENST00000555541 CCDC179H3BU77 68 aa-0.99□□□□□ -2.57
SNX6-204ENST00000555541 POLR2HP52434 150 aaKnown RBP-0.99□□□□□ -2.57
SNX6-204ENST00000555541 THEM6Q8WUY1 208 aa-0.99□□□□□ -2.57
SNX6-204ENST00000555541 WFDC6Q9BQY6 131 aa-0.99□□□□□ -2.57
SNX6-204ENST00000555541 TP53AIP1Q9HCN2 124 aa-0.99□□□□□ -2.57
SNX6-204ENST00000555541 CALML5Q9NZT1 146 aa-0.99□□□□□ -2.57
SNX6-204ENST00000555541 ATRQ13535 2644 aa-0.99□□□□□ -2.57
SNX6-204ENST00000555541 ANKRD31Q8N7Z5 1873 aa-0.99□□□□□ -2.57
SNX6-204ENST00000555541 ARHGAP31Q2M1Z3 1444 aa-0.99□□□□□ -2.57
SNX6-204ENST00000555541 GVINP1Q7Z2Y8 2422 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 A0A1W2PRE2 83 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 E7EQ34 232 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 RBP4P02753 201 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 RPL7P18124 248 aaKnown RBP-1□□□□□ -2.57
SNX6-204ENST00000555541 CFAP126Q5VTH2 177 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 ATP6V0E2Q8NHE4 81 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 CHMP6Q96FZ7 201 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 FXYD6Q9H0Q3 95 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 MED23Q9ULK4 1368 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 ZNF609O15014 1411 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 PTPRMP28827 1452 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 ARAP1Q96P48 1450 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 ZMYM4Q5VZL5 1548 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 WDR97A6NE52 1622 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 DOPEY1Q5JWR5 2465 aa-1□□□□□ -2.57
SNX6-204ENST00000555541 PLXNA1Q9UIW2 1896 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 PLCE1Q9P212 2302 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 J3QLW9 94 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 M0R2T5 61 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 SMIM24O75264 130 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 TMEM78Q5T7P6 136 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 TMEM91Q6ZNR0 172 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms