RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 M0R381 172 aa14.46□□□□□ -0.09
FOXN3-209ENST00000555353 PIK3CD-AS1Q5SR53 167 aa14.46□□□□□ -0.09
FOXN3-209ENST00000555353 TMEM88Q6PEY1 159 aa14.46□□□□□ -0.09
FOXN3-209ENST00000555353 ZNF876PQ49A33 203 aa14.45□□□□□ -0.1
FOXN3-209ENST00000555353 LGALS9CQ6DKI2 356 aa14.45□□□□□ -0.1
FOXN3-209ENST00000555353 MRPL16Q9NX20 251 aaKnown RBP14.45□□□□□ -0.1
FOXN3-209ENST00000555353 SACSQ9NZJ4 4579 aa14.45□□□□□ -0.1
FOXN3-209ENST00000555353 MUC21A0A0G2JKD1 596 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 MUC21A0A140T8X8 626 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 A0A1B0GW15 77 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 S100A8P05109 93 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 NTF3P20783 257 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 SSTP61278 116 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 TWIST1Q15672 202 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 ATP5L2Q7Z4Y8 100 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 CBLN2Q8IUK8 224 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 MUC4Q99102 2169 aa14.44□□□□□ -0.1
FOXN3-209ENST00000555353 NXPH4O95158 308 aa14.43□□□□□ -0.1
FOXN3-209ENST00000555353 SMIM15Q7Z3B0 74 aa14.43□□□□□ -0.1
FOXN3-209ENST00000555353 RASL10AQ92737 203 aa14.43□□□□□ -0.1
FOXN3-209ENST00000555353 C18orf15Q96N68 181 aa14.43□□□□□ -0.1
FOXN3-209ENST00000555353 TRGC1P0CF51 173 aa14.43□□□□□ -0.1
FOXN3-209ENST00000555353 DMRTA1Q5VZB9 504 aa14.43□□□□□ -0.1
FOXN3-209ENST00000555353 MRPL54Q6P161 138 aaKnown RBP14.43□□□□□ -0.1
FOXN3-209ENST00000555353 ALMS1Q8TCU4 4167 aa14.42□□□□□ -0.1
FOXN3-209ENST00000555353 HBBP68871 147 aa14.42□□□□□ -0.1
FOXN3-209ENST00000555353 ELOBQ15370 118 aa14.42□□□□□ -0.1
FOXN3-209ENST00000555353 C15orf53Q8NAA6 179 aa14.42□□□□□ -0.1
FOXN3-209ENST00000555353 SCO1O75880 301 aa14.41□□□□□ -0.1
FOXN3-209ENST00000555353 AP1S3Q96PC3 154 aa14.41□□□□□ -0.1
FOXN3-209ENST00000555353 A8MWV9 139 aa14.4□□□□□ -0.1
FOXN3-209ENST00000555353 RASL11AQ6T310 242 aa14.4□□□□□ -0.1
FOXN3-209ENST00000555353 TRBV24-1A0A075B6N3 115 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 HOXA5P20719 270 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 TRAV26-1A0A087WT03 109 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 SMIM17P0DL12 118 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 P0DMU3 169 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 FAM231AP0DMU4 169 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 FAM231CP0DMU5 169 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 CAMPP49913 170 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 COX19Q49B96 90 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 MSRB1Q9NZV6 116 aa14.39□□□□□ -0.11
FOXN3-209ENST00000555353 RYR3Q15413 4870 aa14.38□□□□□ -0.11
FOXN3-209ENST00000555353 DNAH1Q9P2D7 4330 aa14.38□□□□□ -0.11
FOXN3-209ENST00000555353 TGIF2-C20orf24A0A0A6YYL0 155 aa14.38□□□□□ -0.11
FOXN3-209ENST00000555353 A0A1B0GXF2 115 aa14.38□□□□□ -0.11
FOXN3-209ENST00000555353 IGHV3-53P01767 116 aa14.38□□□□□ -0.11
FOXN3-209ENST00000555353 NUDT3O95989 172 aa14.37□□□□□ -0.11
FOXN3-209ENST00000555353 A0A0J9YY99 117 aa14.36□□□□□ -0.11
FOXN3-209ENST00000555353 RAB4BP61018 213 aa14.36□□□□□ -0.11
FOXN3-209ENST00000555353 OR4C5Q8NGB2 326 aa14.36□□□□□ -0.11
FOXN3-209ENST00000555353 YPEL4Q96NS1 127 aa14.36□□□□□ -0.11
FOXN3-209ENST00000555353 TRAV4A0A0B4J268 109 aa14.35□□□□□ -0.11
FOXN3-209ENST00000555353 RHODO00212 210 aa14.35□□□□□ -0.11
FOXN3-209ENST00000555353 CIDEAO60543 219 aa14.35□□□□□ -0.11
FOXN3-209ENST00000555353 C14orf178Q8N769 122 aaPredicted RBP14.35□□□□□ -0.11
FOXN3-209ENST00000555353 TMEM191AQ9H0A3 160 aa14.35□□□□□ -0.11
FOXN3-209ENST00000555353 DPH3P1Q9H4G8 78 aa14.35□□□□□ -0.11
FOXN3-209ENST00000555353 NACAE9PAV3 2078 aa14.35□□□□□ -0.11
FOXN3-209ENST00000555353 RYR2Q92736 4967 aa14.35□□□□□ -0.11
FOXN3-209ENST00000555353 RS1O15537 224 aa14.34□□□□□ -0.11
FOXN3-209ENST00000555353 EVI2AP22794 236 aa14.34□□□□□ -0.11
FOXN3-209ENST00000555353 UBE2DNLQ8IWF7 75 aa14.34□□□□□ -0.11
FOXN3-209ENST00000555353 FAM74A4Q5TZK3 123 aa14.34□□□□□ -0.11
FOXN3-209ENST00000555353 CFAP126Q5VTH2 177 aa14.34□□□□□ -0.11
FOXN3-209ENST00000555353 JPT2Q9H910 190 aa14.34□□□□□ -0.11
FOXN3-209ENST00000555353 TRGV4A0A0C4DH28 118 aa14.33□□□□□ -0.12
FOXN3-209ENST00000555353 H3BNG1 76 aa14.33□□□□□ -0.12
FOXN3-209ENST00000555353 SLAQ13239 276 aa14.33□□□□□ -0.12
FOXN3-209ENST00000555353 GATD1Q8NB37 220 aa14.33□□□□□ -0.12
FOXN3-209ENST00000555353 A0A087WWL8 130 aa14.32□□□□□ -0.12
FOXN3-209ENST00000555353 HLA-DQA1P01909 254 aa14.32□□□□□ -0.12
FOXN3-209ENST00000555353 MT-ND6P03923 174 aa14.32□□□□□ -0.12
FOXN3-209ENST00000555353 ZFP2Q6ZN57 461 aa14.32□□□□□ -0.12
FOXN3-209ENST00000555353 POM121L12Q8N7R1 296 aa14.32□□□□□ -0.12
FOXN3-209ENST00000555353 ZNF479Q96JC4 524 aa14.32□□□□□ -0.12
FOXN3-209ENST00000555353 GNB1LQ9BYB4 327 aa14.32□□□□□ -0.12
FOXN3-209ENST00000555353 PRO0255Q9UI72 69 aa14.32□□□□□ -0.12
FOXN3-209ENST00000555353 CRYGDP07320 174 aa14.31□□□□□ -0.12
FOXN3-209ENST00000555353 HHLA3Q9XRX5 114 aa14.31□□□□□ -0.12
FOXN3-209ENST00000555353 HYDINQ4G0P3 5121 aa14.31□□□□□ -0.12
FOXN3-209ENST00000555353 PAX4O43316 350 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 MGPP08493 103 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 FHL2Q14192 279 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 SAMD10Q9BYL1 202 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 COLCA2A8K830 154 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 F5H697 171 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 ZNF56Q15929 161 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 FAM104BQ5XKR9 115 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 TMEM136Q6ZRR5 245 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 VSIG2Q96IQ7 327 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 KIF25-AS1Q9Y6Z4 181 aa14.3□□□□□ -0.12
FOXN3-209ENST00000555353 AMN1Q8IY45 258 aa14.29□□□□□ -0.12
FOXN3-209ENST00000555353 VPS13DQ5THJ4 4388 aa14.28□□□□□ -0.12
FOXN3-209ENST00000555353 IGHV3-73A0A0B4J1V6 119 aa14.28□□□□□ -0.12
FOXN3-209ENST00000555353 CRYBA4P53673 196 aa14.28□□□□□ -0.12
FOXN3-209ENST00000555353 CCL18P55774 89 aa14.28□□□□□ -0.12
FOXN3-209ENST00000555353 RAB5AP20339 215 aa14.27□□□□□ -0.12
FOXN3-209ENST00000555353 UFSP1Q6NVU6 142 aa14.27□□□□□ -0.12
FOXN3-209ENST00000555353 FRZBQ92765 325 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms