RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SMIM12Q96EX1 92 aa7.96□□□□□ -1.14
VRK1-204ENST00000555351 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
VRK1-204ENST00000555351 SAMD10Q9BYL1 202 aa7.96□□□□□ -1.14
VRK1-204ENST00000555351 JPT2Q9H910 190 aa7.96□□□□□ -1.14
VRK1-204ENST00000555351 GAGE12JA6NER3 117 aa7.95□□□□□ -1.14
VRK1-204ENST00000555351 OR5AL1P0C617 328 aa7.95□□□□□ -1.14
VRK1-204ENST00000555351 SULT1A2P50226 295 aa7.95□□□□□ -1.14
VRK1-204ENST00000555351 GAGE1Q13065 139 aa7.95□□□□□ -1.14
VRK1-204ENST00000555351 GAGE4Q13068 117 aa7.95□□□□□ -1.14
VRK1-204ENST00000555351 GAGE5Q13069 117 aa7.95□□□□□ -1.14
VRK1-204ENST00000555351 GAGE13Q4V321 117 aa7.95□□□□□ -1.14
VRK1-204ENST00000555351 Q8N1X5 172 aa7.95□□□□□ -1.14
VRK1-204ENST00000555351 NTN5Q8WTR8 489 aaPredicted RBP7.95□□□□□ -1.14
VRK1-204ENST00000555351 TMSB15BA0A087X1C1 80 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 M0R381 172 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 SNAI2O43623 268 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 C1QBP02746 253 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 TAGLN2P37802 199 aaKnown RBP7.94□□□□□ -1.14
VRK1-204ENST00000555351 RPL35P42766 123 aaKnown RBP7.94□□□□□ -1.14
VRK1-204ENST00000555351 TOR2AQ5JU69 321 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 FAM74A4Q5TZK3 123 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 SLC51BQ86UW2 128 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 C14orf178Q8N769 122 aaPredicted RBP7.94□□□□□ -1.14
VRK1-204ENST00000555351 MAPKAPK5-AS1Q8N8E1 139 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 TM2D2Q9BX73 214 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 LRP1BQ9NZR2 4599 aa7.94□□□□□ -1.14
VRK1-204ENST00000555351 TRAV8-3A0A0A6YYJ7 113 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 A0A1B0GV50 99 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 LRCOL1A6NCL2 159 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 PSCAO43653 123 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 PDE6DO43924 150 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 RAB4BP61018 213 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 RPL36AP83881 106 aaKnown RBP7.93□□□□□ -1.14
VRK1-204ENST00000555351 OR10G8Q8NGN5 311 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 RPL36ALQ969Q0 106 aaKnown RBP7.93□□□□□ -1.14
VRK1-204ENST00000555351 CHCHD7Q9BUK0 85 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 GNG13Q9P2W3 67 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 PCLOQ9Y6V0 5065 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 RYR1P21817 5038 aa7.93□□□□□ -1.14
VRK1-204ENST00000555351 TRBV7-3A0A075B6L6 115 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 A0A087WWL8 130 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 IFNA1P01562 189 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 IGHV3-30P01768 117 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 IGHV3-33P01772 117 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 IGHV3-30-3P0DP02 117 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 IGHV3-30-5P0DP03 117 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 CCL20P78556 96 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 MEF2BQ02080 365 aaPredicted RBP7.92□□□□□ -1.14
VRK1-204ENST00000555351 BIN3Q9NQY0 253 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 Q9UF83 564 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 COX11Q9Y6N1 276 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 HSPG2P98160 4391 aa7.92□□□□□ -1.14
VRK1-204ENST00000555351 RPS20P60866 119 aaKnown RBP7.91□□□□□ -1.14
VRK1-204ENST00000555351 UBE2D3P61077 147 aa7.91□□□□□ -1.14
VRK1-204ENST00000555351 UBE2D2P62837 147 aa7.91□□□□□ -1.14
VRK1-204ENST00000555351 PRR27Q6MZM9 219 aa7.91□□□□□ -1.14
VRK1-204ENST00000555351 Q6ZNX1 250 aa7.91□□□□□ -1.14
VRK1-204ENST00000555351 OR10AG1Q8NH19 301 aa7.91□□□□□ -1.14
VRK1-204ENST00000555351 GCSHP23434 173 aa7.9□□□□□ -1.14
VRK1-204ENST00000555351 RPL19P84098 196 aaKnown RBP7.9□□□□□ -1.14
VRK1-204ENST00000555351 ELOBQ15370 118 aa7.9□□□□□ -1.14
VRK1-204ENST00000555351 SPANXN1Q5VSR9 72 aa7.9□□□□□ -1.14
VRK1-204ENST00000555351 NIT1Q86X76 327 aa7.9□□□□□ -1.14
VRK1-204ENST00000555351 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.9□□□□□ -1.14
VRK1-204ENST00000555351 DERL1Q9BUN8 251 aa7.9□□□□□ -1.14
VRK1-204ENST00000555351 KRTAP4-5Q9BYR2 181 aa7.9□□□□□ -1.14
VRK1-204ENST00000555351 Q9HAA7 133 aa7.9□□□□□ -1.14
VRK1-204ENST00000555351 URGCP-MRPS24S4R325 110 aa7.9□□□□□ -1.14
VRK1-204ENST00000555351 XKRY2A2RUG3 117 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 C19orf71A6NCJ1 209 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 IGLV2-8P01709 118 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 BCL2P10415 239 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 GNG4P50150 75 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 TMEM97Q5BJF2 176 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 CENPWQ5EE01 88 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 Q8N814 137 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 RMI2Q96E14 147 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 DAZAP1Q96EP5 407 aaKnown RBP7.89□□□□□ -1.15
VRK1-204ENST00000555351 AP1S3Q96PC3 154 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 VAX2Q9UIW0 290 aa7.89□□□□□ -1.15
VRK1-204ENST00000555351 F2Z2F3 143 aa7.88□□□□□ -1.15
VRK1-204ENST00000555351 IGLC6P0CF74 106 aa7.88□□□□□ -1.15
VRK1-204ENST00000555351 PKIAP61925 76 aa7.88□□□□□ -1.15
VRK1-204ENST00000555351 ZNF56Q15929 161 aa7.88□□□□□ -1.15
VRK1-204ENST00000555351 DAZ4Q86SG3 579 aaKnown RBP7.88□□□□□ -1.15
VRK1-204ENST00000555351 TMEM70Q9BUB7 260 aa7.88□□□□□ -1.15
VRK1-204ENST00000555351 DAZ3Q9NR90 486 aaKnown RBP7.88□□□□□ -1.15
VRK1-204ENST00000555351 KIF25-AS1Q9Y6Z4 181 aa7.88□□□□□ -1.15
VRK1-204ENST00000555351 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
VRK1-204ENST00000555351 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 A0A087WX48 190 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 TRBV6-8A0A0A6YYG3 113 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 SMIM17P0DL12 118 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 XGP55808 180 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 KRTAP10-1P60331 282 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 CACNG7P62955 275 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 KCNIP4Q6PIL6 250 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 AKAP14Q86UN6 197 aa7.87□□□□□ -1.15
VRK1-204ENST00000555351 NEXN-AS1Q8NBZ9 246 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms