RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 BAHCC1Q9P281 2608 aa2.3□□□□□ -2.04
VRK1-203ENST00000555067 INTS1Q8N201 2190 aaKnown RBP2.29□□□□□ -2.04
VRK1-203ENST00000555067 SCRIBQ14160 1630 aa2.29□□□□□ -2.04
VRK1-203ENST00000555067 TRBV10-1A0A0K0K1A3 114 aa2.29□□□□□ -2.04
VRK1-203ENST00000555067 TCRBV3S1A0A5B6 114 aa2.29□□□□□ -2.04
VRK1-203ENST00000555067 INE1O15225 51 aa2.29□□□□□ -2.04
VRK1-203ENST00000555067 C9orf116Q5BN46 136 aaPredicted RBP2.29□□□□□ -2.04
VRK1-203ENST00000555067 DMAC1Q96GE9 116 aa2.29□□□□□ -2.04
VRK1-203ENST00000555067 ATG5Q9H1Y0 275 aa2.29□□□□□ -2.04
VRK1-203ENST00000555067 TRAV23DV6A0A075B6W5 121 aa2.28□□□□□ -2.04
VRK1-203ENST00000555067 PCNX2A6NKB5 2137 aa2.28□□□□□ -2.04
VRK1-203ENST00000555067 PDE6GP18545 87 aa2.28□□□□□ -2.04
VRK1-203ENST00000555067 CBLN1P23435 193 aa2.28□□□□□ -2.04
VRK1-203ENST00000555067 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
VRK1-203ENST00000555067 TTC9CQ8N5M4 171 aa2.28□□□□□ -2.04
VRK1-203ENST00000555067 TMEM14CQ9P0S9 112 aa2.28□□□□□ -2.04
VRK1-203ENST00000555067 C22orf24Q9Y442 160 aa2.28□□□□□ -2.04
VRK1-203ENST00000555067 ADGRB2O60241 1585 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 M0R2N4 97 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 MPC2O95563 127 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 IGHV3-30P01768 117 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 IGHV3-30-5P0DP03 117 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 LINC00322Q6ZN03 302 aaPredicted RBP2.27□□□□□ -2.05
VRK1-203ENST00000555067 SPTSSBQ8NFR3 76 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 C10orf82Q8WW14 230 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 IFI27L1Q96BM0 104 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 MRPL35Q9NZE8 188 aaKnown RBP2.27□□□□□ -2.05
VRK1-203ENST00000555067 SPHKAPQ2M3C7 1700 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 CC2D2AQ9P2K1 1620 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 CASP8AP2Q9UKL3 1982 aa2.27□□□□□ -2.05
VRK1-203ENST00000555067 CDK12Q9NYV4 1490 aaPredicted RBP2.26□□□□□ -2.05
VRK1-203ENST00000555067 LOC110117498A0A087WWA1 95 aa2.26□□□□□ -2.05
VRK1-203ENST00000555067 A6NIN4 97 aa2.26□□□□□ -2.05
VRK1-203ENST00000555067 IL9P15248 144 aa2.26□□□□□ -2.05
VRK1-203ENST00000555067 PCOTHQ58A44 107 aa2.26□□□□□ -2.05
VRK1-203ENST00000555067 SNHG12Q9BXW3 62 aa2.26□□□□□ -2.05
VRK1-203ENST00000555067 MED9Q9NWA0 146 aa2.26□□□□□ -2.05
VRK1-203ENST00000555067 TTC37Q6PGP7 1564 aa2.26□□□□□ -2.05
VRK1-203ENST00000555067 DCAF1Q9Y4B6 1507 aa2.26□□□□□ -2.05
VRK1-203ENST00000555067 CPSF1Q10570 1443 aaKnown RBP2.25□□□□□ -2.05
VRK1-203ENST00000555067 PHRF1Q9P1Y6 1649 aaKnown RBP2.25□□□□□ -2.05
VRK1-203ENST00000555067 IGLV3-32A0A0A0MS00 114 aa2.25□□□□□ -2.05
VRK1-203ENST00000555067 TRAV12-3A0A0B4J271 114 aa2.25□□□□□ -2.05
VRK1-203ENST00000555067 FAM24AA6NFZ4 105 aa2.25□□□□□ -2.05
VRK1-203ENST00000555067 GNG2P59768 71 aa2.25□□□□□ -2.05
VRK1-203ENST00000555067 C5orf38Q86SI9 138 aa2.25□□□□□ -2.05
VRK1-203ENST00000555067 AQP10Q96PS8 301 aa2.25□□□□□ -2.05
VRK1-203ENST00000555067 SNURFQ9Y675 71 aa2.25□□□□□ -2.05
VRK1-203ENST00000555067 IFT140Q96RY7 1462 aa2.25□□□□□ -2.05
VRK1-203ENST00000555067 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
VRK1-203ENST00000555067 CCKP06307 115 aa2.24□□□□□ -2.05
VRK1-203ENST00000555067 NDUFA11Q86Y39 141 aa2.24□□□□□ -2.05
VRK1-203ENST00000555067 PIGBOS1A0A0B4J2F0 54 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 TRBV10-3A0A0K0K1G6 114 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 TMEM262E9PQX1 116 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 RPL37AP61513 92 aaKnown RBP2.23□□□□□ -2.05
VRK1-203ENST00000555067 COL5A1-AS1Q5SY13 56 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 SBSPONQ8IVN8 264 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 ZNF563Q8TA94 476 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 ZCCHC13Q8WW36 166 aaKnown RBP2.23□□□□□ -2.05
VRK1-203ENST00000555067 DPH3P1Q9H4G8 78 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 KIAA0100Q14667 2235 aaKnown RBP2.23□□□□□ -2.05
VRK1-203ENST00000555067 SDK1Q7Z5N4 2213 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 TET1Q8NFU7 2136 aa2.23□□□□□ -2.05
VRK1-203ENST00000555067 ANKRD26Q9UPS8 1709 aa2.22□□□□□ -2.05
VRK1-203ENST00000555067 ZNF142P52746 1687 aaPredicted RBP2.22□□□□□ -2.05
VRK1-203ENST00000555067 OTOGLQ3ZCN5 2332 aa2.22□□□□□ -2.05
VRK1-203ENST00000555067 RBAKDNA6NC62 111 aa2.22□□□□□ -2.05
VRK1-203ENST00000555067 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
VRK1-203ENST00000555067 ZGRF1Q86YA3 2104 aa2.22□□□□□ -2.05
VRK1-203ENST00000555067 ARAP2Q8WZ64 1704 aa2.22□□□□□ -2.05
VRK1-203ENST00000555067 RAPGEF2Q9Y4G8 1499 aa2.21□□□□□ -2.06
VRK1-203ENST00000555067 TRBV6-7A0A0A0MS04 114 aa2.21□□□□□ -2.06
VRK1-203ENST00000555067 UBE2L5PA0A1B0GUS4 154 aa2.21□□□□□ -2.06
VRK1-203ENST00000555067 UBE2L3P68036 154 aaKnown RBP2.21□□□□□ -2.06
VRK1-203ENST00000555067 SPATA45Q537H7 98 aa2.21□□□□□ -2.06
VRK1-203ENST00000555067 GDF5OSQ5U4N7 250 aa2.21□□□□□ -2.06
VRK1-203ENST00000555067 C10orf71Q711Q0 1435 aa2.21□□□□□ -2.06
VRK1-203ENST00000555067 OBSCN-AS1Q96MR7 158 aa2.21□□□□□ -2.06
VRK1-203ENST00000555067 DLEC1Q9Y238 1755 aa2.21□□□□□ -2.06
VRK1-203ENST00000555067 NWD2Q9ULI1 1742 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 TRAV13-2A0A0B4J235 113 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 LOC101927531A0A1B0GV80 90 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 HIGD1CA8MV81 97 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 UNQ6190/PRO20217Q6UXQ8 127 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 COMMD6Q7Z4G1 85 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 ARHGAP5Q13017 1502 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 SHROOM2Q13796 1616 aa2.2□□□□□ -2.06
VRK1-203ENST00000555067 SPAG17Q6Q759 2223 aa2.19□□□□□ -2.06
VRK1-203ENST00000555067 RB1CC1Q8TDY2 1594 aa2.19□□□□□ -2.06
VRK1-203ENST00000555067 PATJQ8NI35 1801 aa2.19□□□□□ -2.06
VRK1-203ENST00000555067 MYH8P13535 1937 aa2.19□□□□□ -2.06
VRK1-203ENST00000555067 CASKIN1Q8WXD9 1431 aa2.19□□□□□ -2.06
VRK1-203ENST00000555067 HCG22E2RYF7 251 aa2.19□□□□□ -2.06
VRK1-203ENST00000555067 SNRNP200O75643 2136 aaKnown RBP2.19□□□□□ -2.06
VRK1-203ENST00000555067 SNCAP37840 140 aa2.19□□□□□ -2.06
VRK1-203ENST00000555067 ATP5EP56381 51 aaPredicted RBP2.19□□□□□ -2.06
VRK1-203ENST00000555067 DCDP81605 110 aaKnown RBP2.19□□□□□ -2.06
VRK1-203ENST00000555067 AMELYQ99218 206 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms