RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 K7EQD1 137 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 RHODO00212 210 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 GZMBP10144 247 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 ERVFC1-1P60608 527 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 RHOHQ15669 191 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 TMEM241Q24JQ0 296 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 SH2D6Q7Z4S9 175 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 SLC25A29Q8N8R3 303 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 FER1L6-AS1Q8NA97 138 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 TPPP3Q9BW30 176 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 SAMD10Q9BYL1 202 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 KMT2AQ03164 3969 aa7.36□□□□□ -1.23
PTCH1-225ENST00000551845 A0A087WWL8 130 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 MUC21A0A0G2JKD1 596 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
PTCH1-225ENST00000551845 CRYGDP07320 174 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 CACNG7P62955 275 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 FAM74A4Q5TZK3 123 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 LYPD5Q6UWN5 251 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 FAM231DQ6ZW35 169 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 OR10AG1Q8NH19 301 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 RNASE7Q9H1E1 156 aaKnown RBP7.35□□□□□ -1.23
PTCH1-225ENST00000551845 RPP21Q9H633 154 aaKnown RBP7.35□□□□□ -1.23
PTCH1-225ENST00000551845 Q9H8V8 135 aa7.35□□□□□ -1.23
PTCH1-225ENST00000551845 IGLV2-18A0A075B6J9 118 aa7.34□□□□□ -1.23
PTCH1-225ENST00000551845 M0R2N4 97 aa7.34□□□□□ -1.23
PTCH1-225ENST00000551845 IGLC6P0CF74 106 aa7.34□□□□□ -1.23
PTCH1-225ENST00000551845 SMIM17P0DL12 118 aa7.34□□□□□ -1.23
PTCH1-225ENST00000551845 SRSF3P84103 164 aaKnown RBP7.34□□□□□ -1.23
PTCH1-225ENST00000551845 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
PTCH1-225ENST00000551845 UFSP1Q6NVU6 142 aa7.34□□□□□ -1.23
PTCH1-225ENST00000551845 LINC01551Q86U37 167 aa7.34□□□□□ -1.23
PTCH1-225ENST00000551845 ZNRF2Q8NHG8 242 aa7.34□□□□□ -1.23
PTCH1-225ENST00000551845 LOC100131303A0A0U1RQF7 123 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 A8MWL6 223 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 C9JQL5 133 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 NXPH4O95158 308 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 CLLU1Q5K131 121 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 WDR73Q6P4I2 378 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 LYZL1Q6UWQ5 148 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 Q6ZSN1 163 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 UPK3BQ9BT76 320 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 NAT8Q9UHE5 227 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 MRPS16Q9Y3D3 137 aaKnown RBP7.33□□□□□ -1.24
PTCH1-225ENST00000551845 KIAA1109Q2LD37 5005 aa7.33□□□□□ -1.24
PTCH1-225ENST00000551845 F5H697 171 aa7.32□□□□□ -1.24
PTCH1-225ENST00000551845 NTF3P20783 257 aa7.32□□□□□ -1.24
PTCH1-225ENST00000551845 RAB4BP61018 213 aa7.32□□□□□ -1.24
PTCH1-225ENST00000551845 IFITM2Q01629 132 aa7.32□□□□□ -1.24
PTCH1-225ENST00000551845 C14orf178Q8N769 122 aaPredicted RBP7.32□□□□□ -1.24
PTCH1-225ENST00000551845 C15orf54Q8N8G6 183 aa7.32□□□□□ -1.24
PTCH1-225ENST00000551845 ATP6V0E2Q8NHE4 81 aa7.32□□□□□ -1.24
PTCH1-225ENST00000551845 OSTCQ9NRP0 149 aa7.32□□□□□ -1.24
PTCH1-225ENST00000551845 MUC4Q99102 2169 aa7.32□□□□□ -1.24
PTCH1-225ENST00000551845 GAGE12JA6NER3 117 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 TRGC1P0CF51 173 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
PTCH1-225ENST00000551845 RPL23P62829 140 aaKnown RBP7.31□□□□□ -1.24
PTCH1-225ENST00000551845 GAGE1Q13065 139 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 GAGE4Q13068 117 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 GAGE5Q13069 117 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 TWIST1Q15672 202 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 CT83Q5H943 113 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 AP1S3Q96PC3 154 aa7.31□□□□□ -1.24
PTCH1-225ENST00000551845 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 NBDYA0A0U1RRE5 68 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 SIVA1O15304 175 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 TIRAPP58753 221 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 ADIRFQ15847 76 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 ZNF56Q15929 161 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 OR10G8Q8NGN5 311 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 TSKUQ8WUA8 353 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 ISOC2Q96AB3 205 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 BORCS7Q96B45 105 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 GTSF1LQ9H1H1 148 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 MSRB1Q9NZV6 116 aa7.3□□□□□ -1.24
PTCH1-225ENST00000551845 TRAV9-2A0A087WT02 112 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 FAM231BA6NCW3 169 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 EVI2AP22794 236 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 CTRLP40313 264 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 RPL36AP83881 106 aaKnown RBP7.29□□□□□ -1.24
PTCH1-225ENST00000551845 TNP2Q05952 138 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 Q6ZR54 194 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 SMIM15Q7Z3B0 74 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.29□□□□□ -1.24
PTCH1-225ENST00000551845 GTSF1Q8WW33 167 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 RPL36ALQ969Q0 106 aaKnown RBP7.29□□□□□ -1.24
PTCH1-225ENST00000551845 PGLYRP4Q96LB8 373 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 GFRA4Q9GZZ7 299 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
PTCH1-225ENST00000551845 TRBV7-3A0A075B6L6 115 aa7.28□□□□□ -1.24
PTCH1-225ENST00000551845 TRAV8-6A0A0B4J262 113 aa7.28□□□□□ -1.24
PTCH1-225ENST00000551845 TTC32Q5I0X7 151 aa7.28□□□□□ -1.24
PTCH1-225ENST00000551845 CNFNQ9BYD5 112 aa7.28□□□□□ -1.24
PTCH1-225ENST00000551845 DPH3P1Q9H4G8 78 aa7.28□□□□□ -1.24
PTCH1-225ENST00000551845 Q9UF83 564 aa7.28□□□□□ -1.24
PTCH1-225ENST00000551845 A0A087WWC5 75 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms