RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CRYGDP07320 174 aa13.38□□□□□ -0.27
DDX54-207ENST00000550016 SRIP30626 198 aa13.38□□□□□ -0.27
DDX54-207ENST00000550016 RHOHQ15669 191 aa13.38□□□□□ -0.27
DDX54-207ENST00000550016 CLLU1Q5K131 121 aa13.38□□□□□ -0.27
DDX54-207ENST00000550016 FAM74A4Q5TZK3 123 aa13.38□□□□□ -0.27
DDX54-207ENST00000550016 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
DDX54-207ENST00000550016 SSTP61278 116 aa13.37□□□□□ -0.27
DDX54-207ENST00000550016 SH2D6Q7Z4S9 175 aa13.37□□□□□ -0.27
DDX54-207ENST00000550016 ZNRF2Q8NHG8 242 aa13.37□□□□□ -0.27
DDX54-207ENST00000550016 SACSQ9NZJ4 4579 aa13.36□□□□□ -0.27
DDX54-207ENST00000550016 CACNG7P62955 275 aa13.36□□□□□ -0.27
DDX54-207ENST00000550016 SOHLH1Q5JUK2 328 aa13.36□□□□□ -0.27
DDX54-207ENST00000550016 LYPD5Q6UWN5 251 aa13.36□□□□□ -0.27
DDX54-207ENST00000550016 LYZL1Q6UWQ5 148 aa13.36□□□□□ -0.27
DDX54-207ENST00000550016 MRPS16Q9Y3D3 137 aaKnown RBP13.36□□□□□ -0.27
DDX54-207ENST00000550016 WDR73Q6P4I2 378 aa13.35□□□□□ -0.27
DDX54-207ENST00000550016 UPK3BQ9BT76 320 aa13.35□□□□□ -0.27
DDX54-207ENST00000550016 NAT8Q9UHE5 227 aa13.35□□□□□ -0.27
DDX54-207ENST00000550016 KMT2AQ03164 3969 aa13.35□□□□□ -0.27
DDX54-207ENST00000550016 IGLV2-18A0A075B6J9 118 aa13.34□□□□□ -0.27
DDX54-207ENST00000550016 A8MWL6 223 aa13.34□□□□□ -0.27
DDX54-207ENST00000550016 C14orf178Q8N769 122 aaPredicted RBP13.34□□□□□ -0.27
DDX54-207ENST00000550016 OSTCQ9NRP0 149 aa13.34□□□□□ -0.27
DDX54-207ENST00000550016 CTRLP40313 264 aa13.33□□□□□ -0.28
DDX54-207ENST00000550016 RPL23P62829 140 aaKnown RBP13.33□□□□□ -0.28
DDX54-207ENST00000550016 CT83Q5H943 113 aa13.33□□□□□ -0.28
DDX54-207ENST00000550016 AP1S3Q96PC3 154 aa13.33□□□□□ -0.28
DDX54-207ENST00000550016 RYR2Q92736 4967 aa13.33□□□□□ -0.28
DDX54-207ENST00000550016 VPS13DQ5THJ4 4388 aa13.33□□□□□ -0.28
DDX54-207ENST00000550016 M0R2N4 97 aa13.32□□□□□ -0.28
DDX54-207ENST00000550016 SMIM17P0DL12 118 aa13.32□□□□□ -0.28
DDX54-207ENST00000550016 RAB4BP61018 213 aa13.32□□□□□ -0.28
DDX54-207ENST00000550016 C15orf54Q8N8G6 183 aa13.32□□□□□ -0.28
DDX54-207ENST00000550016 ISOC2Q96AB3 205 aa13.32□□□□□ -0.28
DDX54-207ENST00000550016 Q9H8V8 135 aa13.32□□□□□ -0.28
DDX54-207ENST00000550016 MSRB1Q9NZV6 116 aa13.32□□□□□ -0.28
DDX54-207ENST00000550016 RYR3Q15413 4870 aa13.32□□□□□ -0.28
DDX54-207ENST00000550016 HYDINQ4G0P3 5121 aa13.31□□□□□ -0.28
DDX54-207ENST00000550016 NTF3P20783 257 aa13.31□□□□□ -0.28
DDX54-207ENST00000550016 ADIRFQ15847 76 aa13.31□□□□□ -0.28
DDX54-207ENST00000550016 GTSF1Q8WW33 167 aa13.31□□□□□ -0.28
DDX54-207ENST00000550016 KIF25-AS1Q9Y6Z4 181 aa13.31□□□□□ -0.28
DDX54-207ENST00000550016 TIRAPP58753 221 aa13.3□□□□□ -0.28
DDX54-207ENST00000550016 ZNF56Q15929 161 aa13.3□□□□□ -0.28
DDX54-207ENST00000550016 Q6ZR54 194 aa13.3□□□□□ -0.28
DDX54-207ENST00000550016 CNFNQ9BYD5 112 aa13.3□□□□□ -0.28
DDX54-207ENST00000550016 Q9UF83 564 aa13.3□□□□□ -0.28
DDX54-207ENST00000550016 GAGE12JA6NER3 117 aa13.29□□□□□ -0.28
DDX54-207ENST00000550016 TRGC1P0CF51 173 aa13.29□□□□□ -0.28
DDX54-207ENST00000550016 FOXA3P55318 350 aaPredicted RBP13.29□□□□□ -0.28
DDX54-207ENST00000550016 GAGE1Q13065 139 aa13.29□□□□□ -0.28
DDX54-207ENST00000550016 GAGE4Q13068 117 aa13.29□□□□□ -0.28
DDX54-207ENST00000550016 GAGE5Q13069 117 aa13.29□□□□□ -0.28
DDX54-207ENST00000550016 GAGE13Q4V321 117 aa13.29□□□□□ -0.28
DDX54-207ENST00000550016 ATP6V0E2Q8NHE4 81 aa13.29□□□□□ -0.28
DDX54-207ENST00000550016 TRBV10-1A0A0K0K1A3 114 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 NBDYA0A0U1RRE5 68 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 F5H697 171 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 LINC00694P0DN24 101 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 LINC00315P59091 139 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 TWIST1Q15672 202 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 OR10G8Q8NGN5 311 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 TSKUQ8WUA8 353 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 PGLYRP4Q96LB8 373 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 GFRA4Q9GZZ7 299 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 V9GYV3 84 aa13.28□□□□□ -0.28
DDX54-207ENST00000550016 DNAH6Q9C0G6 4158 aa13.27□□□□□ -0.28
DDX54-207ENST00000550016 FAM231BA6NCW3 169 aa13.27□□□□□ -0.29
DDX54-207ENST00000550016 SIVA1O15304 175 aa13.27□□□□□ -0.29
DDX54-207ENST00000550016 GTSF1LQ9H1H1 148 aa13.27□□□□□ -0.29
DDX54-207ENST00000550016 EVI2AP22794 236 aa13.26□□□□□ -0.29
DDX54-207ENST00000550016 MGPP08493 103 aa13.25□□□□□ -0.29
DDX54-207ENST00000550016 RPL36AP83881 106 aaKnown RBP13.25□□□□□ -0.29
DDX54-207ENST00000550016 RPL36ALQ969Q0 106 aaKnown RBP13.25□□□□□ -0.29
DDX54-207ENST00000550016 DPH3P1Q9H4G8 78 aa13.25□□□□□ -0.29
DDX54-207ENST00000550016 TRBV7-3A0A075B6L6 115 aa13.24□□□□□ -0.29
DDX54-207ENST00000550016 HIGD1CA8MV81 97 aa13.24□□□□□ -0.29
DDX54-207ENST00000550016 TTC32Q5I0X7 151 aa13.24□□□□□ -0.29
DDX54-207ENST00000550016 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
DDX54-207ENST00000550016 BORCS7Q96B45 105 aa13.24□□□□□ -0.29
DDX54-207ENST00000550016 LELP1Q5T871 98 aa13.23□□□□□ -0.29
DDX54-207ENST00000550016 SMIM15Q7Z3B0 74 aa13.23□□□□□ -0.29
DDX54-207ENST00000550016 TRAV8-6A0A0B4J262 113 aa13.22□□□□□ -0.29
DDX54-207ENST00000550016 A0A1B0GUT8 65 aa13.22□□□□□ -0.29
DDX54-207ENST00000550016 WFDC10BQ8IUB3 73 aa13.22□□□□□ -0.29
DDX54-207ENST00000550016 NEXN-AS1Q8NBZ9 246 aa13.22□□□□□ -0.29
DDX54-207ENST00000550016 H7C1H1 209 aa13.21□□□□□ -0.29
DDX54-207ENST00000550016 M0QY20 66 aa13.21□□□□□ -0.29
DDX54-207ENST00000550016 UBE2D3P61077 147 aa13.21□□□□□ -0.29
DDX54-207ENST00000550016 UBE2D2P62837 147 aa13.21□□□□□ -0.29
DDX54-207ENST00000550016 C1orf134Q5TEV5 83 aa13.21□□□□□ -0.29
DDX54-207ENST00000550016 SUMO4Q6EEV6 95 aa13.21□□□□□ -0.29
DDX54-207ENST00000550016 A0A087WWC5 75 aa13.2□□□□□ -0.3
DDX54-207ENST00000550016 SMIM27A0A1W2PRY6 76 aa13.2□□□□□ -0.3
DDX54-207ENST00000550016 PNRC1Q12796 327 aaPredicted RBP13.2□□□□□ -0.3
DDX54-207ENST00000550016 OR10J3Q5JRS4 329 aa13.2□□□□□ -0.3
DDX54-207ENST00000550016 NUP35Q8NFH5 326 aa13.2□□□□□ -0.3
DDX54-207ENST00000550016 KRTAP1-5Q9BYS1 174 aa13.2□□□□□ -0.3
DDX54-207ENST00000550016 NAT8BQ9UHF3 227 aa13.2□□□□□ -0.3
DDX54-207ENST00000550016 DNAH10OSP0CZ25 163 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms