RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ZC2HC1BQ5TFG8 222 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 STHQ8IWL8 128 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 TEX29Q8N6K0 151 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 TMEM158Q8WZ71 300 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 RASL10AQ92737 203 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 LENEPQ9Y5L5 61 aa8.77□□□□□ -1.01
CCDC38-202ENST00000546386 HLA-DRB4P13762 266 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 PKIAP61925 76 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 ZNF56Q15929 161 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 DEFB125Q8N687 156 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 LINC00482Q8N8I6 264 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 NRACQ8N912 160 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
CCDC38-202ENST00000546386 HLA-DRB4X5D2U9 266 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 A0A1B0GW15 77 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 STPG4Q8N801 248 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 MAP1LC3AQ9H492 121 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 U3KQK5 164 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 TENM3Q9P273 2699 aa8.76□□□□□ -1.01
CCDC38-202ENST00000546386 OR11H12B2RN74 326 aa8.75□□□□□ -1.01
CCDC38-202ENST00000546386 CACNG7P62955 275 aa8.75□□□□□ -1.01
CCDC38-202ENST00000546386 DKK2Q9UBU2 259 aa8.75□□□□□ -1.01
CCDC38-202ENST00000546386 SMIM17P0DL12 118 aa8.75□□□□□ -1.01
CCDC38-202ENST00000546386 IGLL1P15814 213 aa8.75□□□□□ -1.01
CCDC38-202ENST00000546386 DEFA6Q01524 100 aa8.75□□□□□ -1.01
CCDC38-202ENST00000546386 CHCHD1Q96BP2 118 aaKnown RBP8.75□□□□□ -1.01
CCDC38-202ENST00000546386 ZNF747Q9BV97 191 aa8.75□□□□□ -1.01
CCDC38-202ENST00000546386 C16orf95Q9H693 158 aa8.74□□□□□ -1.01
CCDC38-202ENST00000546386 SUMO4Q6EEV6 95 aa8.74□□□□□ -1.01
CCDC38-202ENST00000546386 MAP1LC3CQ9BXW4 147 aa8.74□□□□□ -1.01
CCDC38-202ENST00000546386 TEX43Q6ZNM6 134 aa8.73□□□□□ -1.01
CCDC38-202ENST00000546386 Q6ZSN1 163 aa8.73□□□□□ -1.01
CCDC38-202ENST00000546386 TTTY13Q9BZ97 58 aa8.73□□□□□ -1.01
CCDC38-202ENST00000546386 DPH3P1Q9H4G8 78 aa8.73□□□□□ -1.01
CCDC38-202ENST00000546386 DUSP14O95147 198 aaKnown RBP8.73□□□□□ -1.01
CCDC38-202ENST00000546386 PRSS1P07477 247 aa8.73□□□□□ -1.01
CCDC38-202ENST00000546386 RPL39P62891 51 aaKnown RBP8.73□□□□□ -1.01
CCDC38-202ENST00000546386 AP1S3Q96PC3 154 aa8.73□□□□□ -1.01
CCDC38-202ENST00000546386 CSTL1Q9H114 145 aa8.73□□□□□ -1.01
CCDC38-202ENST00000546386 SCRT2Q9NQ03 307 aa8.73□□□□□ -1.01
CCDC38-202ENST00000546386 DEFB4AO15263 64 aa8.72□□□□□ -1.01
CCDC38-202ENST00000546386 NUDT3O95989 172 aa8.72□□□□□ -1.01
CCDC38-202ENST00000546386 TSPOP30536 169 aa8.72□□□□□ -1.01
CCDC38-202ENST00000546386 LINC00315P59091 139 aa8.72□□□□□ -1.01
CCDC38-202ENST00000546386 SPAG8Q99932 426 aaPredicted RBP8.72□□□□□ -1.01
CCDC38-202ENST00000546386 IGHV3-38A0A0C4DH36 116 aa8.72□□□□□ -1.01
CCDC38-202ENST00000546386 CRLF1O75462 422 aa8.72□□□□□ -1.01
CCDC38-202ENST00000546386 ZMAT5Q9UDW3 170 aaKnown RBP8.72□□□□□ -1.01
CCDC38-202ENST00000546386 HBDP02042 147 aa8.71□□□□□ -1.01
CCDC38-202ENST00000546386 CTAG1AP78358 180 aa8.71□□□□□ -1.01
CCDC38-202ENST00000546386 SCGB2A2Q13296 93 aa8.71□□□□□ -1.01
CCDC38-202ENST00000546386 OPRPNQ99935 248 aaPredicted RBP8.71□□□□□ -1.01
CCDC38-202ENST00000546386 SUMO2P61956 95 aaKnown RBP8.71□□□□□ -1.02
CCDC38-202ENST00000546386 C1orf158Q8N1D5 194 aa8.71□□□□□ -1.02
CCDC38-202ENST00000546386 CRYGDP07320 174 aa8.7□□□□□ -1.02
CCDC38-202ENST00000546386 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
CCDC38-202ENST00000546386 IGLV2-18A0A075B6J9 118 aa8.7□□□□□ -1.02
CCDC38-202ENST00000546386 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
CCDC38-202ENST00000546386 IGHV4-4A0A075B6R2 117 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 TMEM238LA0A1B0GVL6 79 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
CCDC38-202ENST00000546386 Q6ZN92 141 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 Q6ZVH6 145 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 PHLDA1Q8WV24 401 aaPredicted RBP8.69□□□□□ -1.02
CCDC38-202ENST00000546386 HSPB8Q9UJY1 196 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 TRGV1A0A0A0MS02 117 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 IGLV1-51P01701 117 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
CCDC38-202ENST00000546386 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
CCDC38-202ENST00000546386 CEMP1Q6PRD7 247 aaPredicted RBP8.69□□□□□ -1.02
CCDC38-202ENST00000546386 C9orf85Q96MD7 179 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 JMJD8Q96S16 334 aa8.69□□□□□ -1.02
CCDC38-202ENST00000546386 PPBPP02775 128 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 LAGE3Q14657 143 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 Q6ZTI0 123 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 NOP10Q9NPE3 64 aaKnown RBP8.68□□□□□ -1.02
CCDC38-202ENST00000546386 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 SAMD5Q5TGI4 173 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 ERASQ7Z444 233 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 Q8N8P6 123 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 SMIM2Q9BVW6 85 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 TMEM160Q9NX00 188 aa8.68□□□□□ -1.02
CCDC38-202ENST00000546386 SAMD13Q5VXD3 122 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 SNHG12Q9BXW3 62 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 KIR2DL5BA0A0G2JN68 375 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 KIR2DL5BA0A0G2JPC4 375 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 KIR2DL5AQ8N109 375 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 GOLT1BQ9Y3E0 138 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 TRAV9-2A0A087WT02 112 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 A0A1B0GV90 55 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 NDUFA7O95182 113 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 INSP01308 110 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 ANKRD39Q53RE8 183 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 NXT2Q9NPJ8 142 aaKnown RBP8.67□□□□□ -1.02
CCDC38-202ENST00000546386 C19orf73Q9NVV2 129 aa8.67□□□□□ -1.02
CCDC38-202ENST00000546386 FCER1GP30273 86 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 NMUP48645 174 aa8.66□□□□□ -1.02
CCDC38-202ENST00000546386 HINT1P49773 126 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms