RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 FER1L6-AS1Q8NA97 138 aa4.75□□□□□ -1.65
CDCA3-209ENST00000544610 NHLRC2Q8NBF2 726 aa4.75□□□□□ -1.65
CDCA3-209ENST00000544610 CSNK1G2-AS1Q8NCQ2 148 aa4.75□□□□□ -1.65
CDCA3-209ENST00000544610 BORCS7Q96B45 105 aa4.75□□□□□ -1.65
CDCA3-209ENST00000544610 SPXQ9BT56 116 aa4.75□□□□□ -1.65
CDCA3-209ENST00000544610 GNB1LQ9BYB4 327 aa4.75□□□□□ -1.65
CDCA3-209ENST00000544610 KLK5Q9Y337 293 aaPredicted RBP4.75□□□□□ -1.65
CDCA3-209ENST00000544610 GOLT1BQ9Y3E0 138 aa4.75□□□□□ -1.65
CDCA3-209ENST00000544610 DYNC1H1Q14204 4646 aaKnown RBP4.75□□□□□ -1.65
CDCA3-209ENST00000544610 ABCA13Q86UQ4 5058 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 A0A1B0GXF2 115 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 GAGE10A6NGK3 116 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 COLCA2A8K830 154 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 M0R2Z0 102 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 HLA-DQA1P01909 254 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 GIG44P09565 113 aaPredicted RBP4.74□□□□□ -1.65
CDCA3-209ENST00000544610 RNASE4P34096 147 aaKnown RBP4.74□□□□□ -1.65
CDCA3-209ENST00000544610 RIGQ13278 110 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 BTN1A1Q13410 526 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 PRR9Q5T870 116 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 LGALS9CQ6DKI2 356 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 NUP35Q8NFH5 326 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 TMEM263Q8WUH6 116 aaKnown RBP4.74□□□□□ -1.65
CDCA3-209ENST00000544610 GTSF1Q8WW33 167 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 RNF183Q96D59 192 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 FAM210BQ96KR6 192 aa4.74□□□□□ -1.65
CDCA3-209ENST00000544610 TRAV12-3A0A0B4J271 114 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 RAB5AP20339 215 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 S100A4P26447 101 aaKnown RBP4.73□□□□□ -1.65
CDCA3-209ENST00000544610 DEFB1P60022 68 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 HBBP68871 147 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 DAZ2Q13117 558 aaKnown RBP4.73□□□□□ -1.65
CDCA3-209ENST00000544610 LGALS9BQ3B8N2 356 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 TMEM88Q6PEY1 159 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 CBLN2Q8IUK8 224 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 PHLDA1Q8WV24 401 aaPredicted RBP4.73□□□□□ -1.65
CDCA3-209ENST00000544610 C16orf74Q96GX8 76 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 C9orf85Q96MD7 179 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 C18orf15Q96N68 181 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 C11orf21Q9P2W6 132 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 DNAH17Q9UFH2 4485 aa4.73□□□□□ -1.65
CDCA3-209ENST00000544610 PKHD1P08F94 4074 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 IGHV3-16A0A0C4DH30 117 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 TEX48A0A1B0GUV7 120 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 CA1P00915 261 aaPredicted RBP4.72□□□□□ -1.65
CDCA3-209ENST00000544610 PPBPP02775 128 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 TRGC1P0CF51 173 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 RNASE3P12724 160 aaKnown RBP4.72□□□□□ -1.65
CDCA3-209ENST00000544610 MIFP14174 115 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 TCL1AP56279 114 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 SMIM15Q7Z3B0 74 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 ZFP82Q8N141 532 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 C1orf158Q8N1D5 194 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 SYT8Q8NBV8 401 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 RNASE8Q8TDE3 154 aaKnown RBP4.72□□□□□ -1.65
CDCA3-209ENST00000544610 RASL10AQ92737 203 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 TMEM191AQ9H0A3 160 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 XCL2Q9UBD3 114 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 DNAH11Q96DT5 4516 aa4.72□□□□□ -1.65
CDCA3-209ENST00000544610 TRAV12-2A0A075B6T6 113 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 M0R2P5 195 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 PPP1R17O96001 155 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 IGKV3-20P01619 116 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 ARMS2P0C7Q2 107 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 RPL35AP18077 110 aaKnown RBP4.71□□□□□ -1.66
CDCA3-209ENST00000544610 ZNF124Q15973 351 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 RRN3P1Q2M238 152 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 LYZL1Q6UWQ5 148 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 C11orf72Q8NBR9 251 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 LINC01587Q99440 93 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 TMEM208Q9BTX3 173 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 C11orf68Q9H3H3 251 aaKnown RBP4.71□□□□□ -1.66
CDCA3-209ENST00000544610 LAMTOR2Q9Y2Q5 125 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 PHLDA3Q9Y5J5 127 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 URGCP-MRPS24S4R325 110 aa4.71□□□□□ -1.66
CDCA3-209ENST00000544610 PKD1P98161 4303 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 CBY3A6NI87 242 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 A8MWV9 139 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 RHODO00212 210 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 PHOX2AO14813 284 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 SCO1O75880 301 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 RBMY1A1P0DJD3 496 aaKnown RBP4.7□□□□□ -1.66
CDCA3-209ENST00000544610 RBMY1CP0DJD4 496 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 NTF3P20783 257 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 TCTAP57738 103 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 RBMY1FQ15415 496 aaKnown RBP4.7□□□□□ -1.66
CDCA3-209ENST00000544610 SPANXN1Q5VSR9 72 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 ZFP2Q6ZN57 461 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 TMEM136Q6ZRR5 245 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 POM121L12Q8N7R1 296 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 C11orf45Q8TAV5 145 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 PGLYRP4Q96LB8 373 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 AP1S3Q96PC3 154 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 GSN-AS1Q9NRJ2 163 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 NAGKQ9UJ70 344 aa4.7□□□□□ -1.66
CDCA3-209ENST00000544610 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
CDCA3-209ENST00000544610 TGIF2-C20orf24A0A0A6YYL0 155 aa4.69□□□□□ -1.66
CDCA3-209ENST00000544610 LYRM9A8MSI8 78 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms