RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 SFRP2Q96HF1 295 aa11.78□□□□□ -0.52
LTBR-210ENST00000542830 MLST8Q9BVC4 326 aa11.78□□□□□ -0.52
LTBR-210ENST00000542830 A0A087WTM6 91 aa11.77□□□□□ -0.53
LTBR-210ENST00000542830 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.53
LTBR-210ENST00000542830 M0R381 172 aa11.77□□□□□ -0.53
LTBR-210ENST00000542830 FAM74A4Q5TZK3 123 aa11.77□□□□□ -0.53
LTBR-210ENST00000542830 C14orf178Q8N769 122 aaPredicted RBP11.76□□□□□ -0.53
LTBR-210ENST00000542830 GNG13Q9P2W3 67 aa11.76□□□□□ -0.53
LTBR-210ENST00000542830 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
LTBR-210ENST00000542830 A0A087WWC5 75 aa11.75□□□□□ -0.53
LTBR-210ENST00000542830 A0A087WWL8 130 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 PSCAO43653 123 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 IGHV3-30P01768 117 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 IGHV3-33P01772 117 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 IGHV3-30-3P0DP02 117 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 IGHV3-30-5P0DP03 117 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 RPL35P42766 123 aaKnown RBP11.74□□□□□ -0.53
LTBR-210ENST00000542830 SULT1A2P50226 295 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 C11orf52Q96A22 123 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
LTBR-210ENST00000542830 TRBV10-1A0A0K0K1A3 114 aa11.73□□□□□ -0.53
LTBR-210ENST00000542830 C1QBP02746 253 aa11.73□□□□□ -0.53
LTBR-210ENST00000542830 APOBP04114 4563 aaKnown RBP11.73□□□□□ -0.53
LTBR-210ENST00000542830 CCL20P78556 96 aa11.73□□□□□ -0.53
LTBR-210ENST00000542830 LAGE3Q14657 143 aa11.73□□□□□ -0.53
LTBR-210ENST00000542830 PRR27Q6MZM9 219 aa11.73□□□□□ -0.53
LTBR-210ENST00000542830 SLC51BQ86UW2 128 aa11.73□□□□□ -0.53
LTBR-210ENST00000542830 SNAI2O43623 268 aa11.72□□□□□ -0.53
LTBR-210ENST00000542830 IFNA1P01562 189 aa11.72□□□□□ -0.53
LTBR-210ENST00000542830 RPL19P84098 196 aaKnown RBP11.72□□□□□ -0.53
LTBR-210ENST00000542830 MAPKAPK5-AS1Q8N8E1 139 aa11.72□□□□□ -0.53
LTBR-210ENST00000542830 Q9UF83 564 aa11.72□□□□□ -0.53
LTBR-210ENST00000542830 OR5AL1P0C617 328 aa11.71□□□□□ -0.53
LTBR-210ENST00000542830 RPL36AP83881 106 aaKnown RBP11.71□□□□□ -0.53
LTBR-210ENST00000542830 RPL36ALQ969Q0 106 aaKnown RBP11.71□□□□□ -0.53
LTBR-210ENST00000542830 SSBP4Q9BWG4 385 aaPredicted RBP11.71□□□□□ -0.53
LTBR-210ENST00000542830 Q9HAA7 133 aa11.71□□□□□ -0.53
LTBR-210ENST00000542830 PDE6DO43924 150 aa11.7□□□□□ -0.54
LTBR-210ENST00000542830 RAB4BP61018 213 aa11.7□□□□□ -0.54
LTBR-210ENST00000542830 TOR2AQ5JU69 321 aa11.7□□□□□ -0.54
LTBR-210ENST00000542830 Q6ZNX1 250 aa11.7□□□□□ -0.54
LTBR-210ENST00000542830 OR10AG1Q8NH19 301 aa11.7□□□□□ -0.54
LTBR-210ENST00000542830 SMIM12Q96EX1 92 aa11.7□□□□□ -0.54
LTBR-210ENST00000542830 DERL1Q9BUN8 251 aa11.7□□□□□ -0.54
LTBR-210ENST00000542830 TM2D2Q9BX73 214 aa11.7□□□□□ -0.54
LTBR-210ENST00000542830 MEF2BQ02080 365 aaPredicted RBP11.69□□□□□ -0.54
LTBR-210ENST00000542830 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
LTBR-210ENST00000542830 SPANXN1Q5VSR9 72 aa11.69□□□□□ -0.54
LTBR-210ENST00000542830 TRBV7-3A0A075B6L6 115 aa11.68□□□□□ -0.54
LTBR-210ENST00000542830 TRAV8-3A0A0A6YYJ7 113 aa11.68□□□□□ -0.54
LTBR-210ENST00000542830 TAGLN2P37802 199 aaKnown RBP11.68□□□□□ -0.54
LTBR-210ENST00000542830 Q8N1X5 172 aa11.68□□□□□ -0.54
LTBR-210ENST00000542830 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
LTBR-210ENST00000542830 DAZAP1Q96EP5 407 aaKnown RBP11.68□□□□□ -0.54
LTBR-210ENST00000542830 URGCP-MRPS24S4R325 110 aa11.68□□□□□ -0.54
LTBR-210ENST00000542830 LRCOL1A6NCL2 159 aa11.67□□□□□ -0.54
LTBR-210ENST00000542830 FUSP35637 526 aaKnown RBP eCLIP11.67□□□□□ -0.54
LTBR-210ENST00000542830 GNG4P50150 75 aa11.67□□□□□ -0.54
LTBR-210ENST00000542830 RPS20P60866 119 aaKnown RBP11.67□□□□□ -0.54
LTBR-210ENST00000542830 ZNF56Q15929 161 aa11.67□□□□□ -0.54
LTBR-210ENST00000542830 NTN5Q8WTR8 489 aaPredicted RBP11.67□□□□□ -0.54
LTBR-210ENST00000542830 BCL2P10415 239 aa11.66□□□□□ -0.54
LTBR-210ENST00000542830 UBE2D3P61077 147 aa11.66□□□□□ -0.54
LTBR-210ENST00000542830 UBE2D2P62837 147 aa11.66□□□□□ -0.54
LTBR-210ENST00000542830 AKAP14Q86UN6 197 aa11.66□□□□□ -0.54
LTBR-210ENST00000542830 CHCHD7Q9BUK0 85 aa11.66□□□□□ -0.54
LTBR-210ENST00000542830 KRTAP4-5Q9BYR2 181 aa11.66□□□□□ -0.54
LTBR-210ENST00000542830 BIN3Q9NQY0 253 aa11.66□□□□□ -0.54
LTBR-210ENST00000542830 VAX2Q9UIW0 290 aa11.66□□□□□ -0.54
LTBR-210ENST00000542830 XKRY2A2RUG3 117 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 GCSHP23434 173 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 KCNIP4Q6PIL6 250 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 DAZ4Q86SG3 579 aaKnown RBP11.65□□□□□ -0.54
LTBR-210ENST00000542830 NIT1Q86X76 327 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 Q8N3U1 123 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.65□□□□□ -0.54
LTBR-210ENST00000542830 AP1S3Q96PC3 154 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 DAZ3Q9NR90 486 aaKnown RBP11.65□□□□□ -0.54
LTBR-210ENST00000542830 MED9Q9NWA0 146 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 COX11Q9Y6N1 276 aa11.65□□□□□ -0.54
LTBR-210ENST00000542830 MUC21A0A0G2JKD1 596 aa11.64□□□□□ -0.55
LTBR-210ENST00000542830 MUC21A0A140T8X8 626 aa11.64□□□□□ -0.55
LTBR-210ENST00000542830 ELOBQ15370 118 aa11.64□□□□□ -0.55
LTBR-210ENST00000542830 Q8N814 137 aa11.64□□□□□ -0.55
LTBR-210ENST00000542830 OR2D3Q8NGH3 330 aa11.64□□□□□ -0.55
LTBR-210ENST00000542830 RMI2Q96E14 147 aa11.64□□□□□ -0.55
LTBR-210ENST00000542830 A0A087WX48 190 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 IGLV5-52A0A0A0MRZ9 124 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 RAB19A4D1S5 217 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 C19orf71A6NCJ1 209 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 F5H697 171 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 KRTAP10-1P60331 282 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 C9orf62Q8N4C0 152 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 NEXN-AS1Q8NBZ9 246 aa11.63□□□□□ -0.55
LTBR-210ENST00000542830 P01737 135 aa11.62□□□□□ -0.55
LTBR-210ENST00000542830 IGLC6P0CF74 106 aa11.62□□□□□ -0.55
LTBR-210ENST00000542830 SSTP61278 116 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms