RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 NCOR1O75376 2440 aa-0.23□□□□□ -2.45
KNTC1-213ENST00000542727 DOPEY1Q5JWR5 2465 aa-0.23□□□□□ -2.45
KNTC1-213ENST00000542727 MED23Q9ULK4 1368 aa-0.23□□□□□ -2.45
KNTC1-213ENST00000542727 ABCA2Q9BZC7 2435 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 CHD9Q3L8U1 2897 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 TMEM14DPA8MWL7 114 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 CCDC179H3BU77 68 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 M0R3E3 92 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 SLC25A6P12236 298 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 S100GP29377 79 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 DEFB109BQ30KR1 87 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 TMEM128Q5BJH2 165 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 OR2T2Q6IF00 324 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 OR8I2Q8N0Y5 310 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 C20orf197Q8N268 126 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 ATP6V0E2Q8NHE4 81 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 IFI27L1Q96BM0 104 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 CYP4F30PQ9H0H9 118 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 PRO0255Q9UI72 69 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 HSPG2P98160 4391 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 CACNA1AO00555 2505 aa-0.24□□□□□ -2.45
KNTC1-213ENST00000542727 HERC1Q15751 4861 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 ZNF815PA8K554 130 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 J3QLW9 94 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 SPINK8P0C7L1 97 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 SMIM6P0DI80 62 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 CCL3L1P16619 93 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 INSL4Q14641 139 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 SPCS2Q15005 226 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 TMEM91Q6ZNR0 172 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 SSBP3-AS1Q7Z2R9 100 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 CNFNQ9BYD5 112 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 BANF2Q9H503 90 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 SSC5DA1L4H1 1573 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 RYR3Q15413 4870 aa-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 MUC22E2RYF6 1773 aaPredicted RBP-0.25□□□□□ -2.45
KNTC1-213ENST00000542727 KIAA0100Q14667 2235 aaKnown RBP-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 UHRF1BP1LA0JNW5 1464 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 OVOS2A0A0G2JMS6 1433 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 ARHGAP31Q2M1Z3 1444 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 TRGV1A0A0A0MS02 117 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 A6NIN4 97 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 J3KT08 172 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 PIN1P1O15428 100 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 CMPK1P30085 196 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 TFAMQ00059 246 aaKnown RBP-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 WFDC2Q14508 124 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 CLLU1Q5K131 121 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 RPL7L1Q6DKI1 246 aaKnown RBP-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 ATP11AUNQ6ZP68 121 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 CTAGE3PQ8IX95 158 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 CENPHQ9H3R5 247 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 SPANXCQ9NY87 97 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 USH2AO75445 5202 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 LPAP08519 4548 aa-0.26□□□□□ -2.45
KNTC1-213ENST00000542727 HMCN2Q8NDA2 5059 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 LRP2P98164 4655 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 A0A087WTM6 91 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 TRAV12-3A0A0B4J271 114 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 TRAV22A0A0B4J277 110 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 TSTD3H0UI37 97 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 APOC4-APOC2K7ER74 178 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 MT-ND4LP03901 98 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 HLA-DRB4P13762 266 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 TCTE3Q8IZS6 198 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 DNAJC15Q9Y5T4 150 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 HLA-DRB4X5D2U9 266 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 RYR1P21817 5038 aa-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 SIPA1L3O60292 1781 aaPredicted RBP-0.27□□□□□ -2.45
KNTC1-213ENST00000542727 KIAA1109Q2LD37 5005 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 PTPN13Q12923 2485 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 TRBV10-3A0A0K0K1G6 114 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 FAM92AA1XBS5 289 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 NPFFO15130 113 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 FABP1P07148 127 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 S100A3P33764 101 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 EDDM3BP56851 147 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 NPC2P61916 151 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 RPS28P62857 69 aaKnown RBP-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 Q5VSD8 79 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 TMEM244Q5VVB8 128 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 SMIM15Q7Z3B0 74 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 Q8IZM0 81 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 Q96NJ1 140 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 RPRMQ9NS64 109 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 HSPB11Q9Y547 144 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 SPCS1Q9Y6A9 102 aa-0.28□□□□□ -2.45
KNTC1-213ENST00000542727 PLCE1Q9P212 2302 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 PTPRMP28827 1452 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 UBR4Q5T4S7 5183 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 KMT2AQ03164 3969 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 TRAV36DV7A0A075B6V5 113 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 TRAV1-2A0A0B4J238 106 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 M0R2P5 195 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 IFNA17P01571 189 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 SPRR2DP22532 72 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 NCS1P62166 190 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 SPAG11BQ08648 103 aa-0.29□□□□□ -2.46
KNTC1-213ENST00000542727 NPVFQ9HCQ7 196 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms