RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 MDFICQ9P1T7 246 aa9.16□□□□□ -0.94
POLR1B-216ENST00000537335 KMT2EQ8IZD2 1858 aa9.16□□□□□ -0.94
POLR1B-216ENST00000537335 IGHV4-4A0A075B6R2 117 aa9.16□□□□□ -0.94
POLR1B-216ENST00000537335 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
POLR1B-216ENST00000537335 NDUFB1O75438 58 aa9.16□□□□□ -0.94
POLR1B-216ENST00000537335 XCL1P47992 114 aa9.15□□□□□ -0.94
POLR1B-216ENST00000537335 MIR7-3HGQ8N6C7 128 aa9.15□□□□□ -0.94
POLR1B-216ENST00000537335 LINC01619G3V211 115 aa9.15□□□□□ -0.94
POLR1B-216ENST00000537335 IGLV3-19P01714 112 aa9.15□□□□□ -0.94
POLR1B-216ENST00000537335 C11orf44Q8N8P7 122 aa9.15□□□□□ -0.94
POLR1B-216ENST00000537335 Q6ZQT7 251 aa9.15□□□□□ -0.95
POLR1B-216ENST00000537335 Q8N976 141 aa9.15□□□□□ -0.95
POLR1B-216ENST00000537335 PROK2Q9HC23 129 aa9.15□□□□□ -0.95
POLR1B-216ENST00000537335 IGKV1-17P01599 117 aa9.14□□□□□ -0.95
POLR1B-216ENST00000537335 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
POLR1B-216ENST00000537335 IGKV1OR2-108A0A075B7D4 117 aa9.14□□□□□ -0.95
POLR1B-216ENST00000537335 H3BUX3 64 aa9.14□□□□□ -0.95
POLR1B-216ENST00000537335 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
POLR1B-216ENST00000537335 ZNF524Q96C55 264 aa9.14□□□□□ -0.95
POLR1B-216ENST00000537335 CCL19Q99731 98 aa9.14□□□□□ -0.95
POLR1B-216ENST00000537335 GATA4P43694 442 aa9.14□□□□□ -0.95
POLR1B-216ENST00000537335 CFHR3Q02985 330 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 LINC00322Q6ZN03 302 aaPredicted RBP9.13□□□□□ -0.95
POLR1B-216ENST00000537335 ODF3L1Q8IXM7 274 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 LST1O00453 97 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 NSUN5P1Q3KNT7 163 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 COL6A6A6NMZ7 2263 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 G3V318 75 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 GNLYP22749 145 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 FAM19A3Q7Z5A8 133 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 ABCA4P78363 2273 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 MED14OSP0DP75 135 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 Q6JHZ5 121 aa9.13□□□□□ -0.95
POLR1B-216ENST00000537335 VWCEQ96DN2 955 aa9.12□□□□□ -0.95
POLR1B-216ENST00000537335 KLK5Q9Y337 293 aaPredicted RBP9.12□□□□□ -0.95
POLR1B-216ENST00000537335 COL4A5P29400 1685 aa9.12□□□□□ -0.95
POLR1B-216ENST00000537335 ANGP03950 147 aaKnown RBP9.12□□□□□ -0.95
POLR1B-216ENST00000537335 UBE2BP63146 152 aa9.12□□□□□ -0.95
POLR1B-216ENST00000537335 LINC00310P59036 64 aa9.12□□□□□ -0.95
POLR1B-216ENST00000537335 USF3Q68DE3 2245 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 LOXP28300 417 aaPredicted RBP9.11□□□□□ -0.95
POLR1B-216ENST00000537335 FGF23Q9GZV9 251 aaPredicted RBP9.11□□□□□ -0.95
POLR1B-216ENST00000537335 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 IGHV3-30P01768 117 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 IGHV3-30-5P0DP03 117 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 SIP14410 1827 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 TRBV27A0A0K0K1C4 114 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 TIRAPP58753 221 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 DIAPH2-AS1Q14236 149 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 Q6ZSR3 168 aa9.11□□□□□ -0.95
POLR1B-216ENST00000537335 RALGAPA2Q2PPJ7 1873 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 NCR3O14931 201 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 GATA3P23771 443 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 SOSTDC1Q6X4U4 206 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 IGHV7-4-1A0A0J9YVY3 117 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 ETDCA0A1B0GVM5 59 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 SAA4P35542 130 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 UBE2AP49459 152 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 LTBP1Q14766 1721 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 I3L2K1 104 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 CLPSL2Q6UWE3 100 aa9.1□□□□□ -0.95
POLR1B-216ENST00000537335 CACNA1BQ00975 2339 aa9.09□□□□□ -0.95
POLR1B-216ENST00000537335 DIRC1Q969H9 104 aa9.09□□□□□ -0.95
POLR1B-216ENST00000537335 H7C423 109 aa9.09□□□□□ -0.95
POLR1B-216ENST00000537335 MIFP14174 115 aa9.09□□□□□ -0.95
POLR1B-216ENST00000537335 TRAV7A0A075B6U4 112 aa9.09□□□□□ -0.95
POLR1B-216ENST00000537335 PRR19A6NJB7 356 aa9.09□□□□□ -0.95
POLR1B-216ENST00000537335 SCXQ7RTU7 201 aa9.09□□□□□ -0.95
POLR1B-216ENST00000537335 K7EIM0 57 aa9.08□□□□□ -0.96
POLR1B-216ENST00000537335 J3QLI3 93 aa9.08□□□□□ -0.96
POLR1B-216ENST00000537335 BRD3OSQ6XYD6 125 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 PRAC2D3DTV9 90 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 PLA2G5P39877 138 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 C17orf82Q86X59 251 aaPredicted RBP9.07□□□□□ -0.96
POLR1B-216ENST00000537335 LINC00308Q8TCZ7 52 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 U3KQK5 164 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 MED12LQ86YW9 2145 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 COX6B1P14854 86 aa9.07□□□□□ -0.96
POLR1B-216ENST00000537335 DEFB123Q8N688 67 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 PRORYQ9H606 182 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
POLR1B-216ENST00000537335 ZNF295-AS1Q8N0V1 137 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 IGLV2-14P01704 120 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 ZNF503-AS2A6NEH8 195 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 PLXNA1Q9UIW2 1896 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 PLXNB2O15031 1838 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 TET1Q8NFU7 2136 aa9.06□□□□□ -0.96
POLR1B-216ENST00000537335 COL8A2P25067 703 aa9.05□□□□□ -0.96
POLR1B-216ENST00000537335 RPS28P62857 69 aaKnown RBP9.05□□□□□ -0.96
POLR1B-216ENST00000537335 ANK1P16157 1881 aa9.05□□□□□ -0.96
POLR1B-216ENST00000537335 MALRD1Q5VYJ5 2156 aa9.05□□□□□ -0.96
POLR1B-216ENST00000537335 PLXNB1O43157 2135 aa9.05□□□□□ -0.96
POLR1B-216ENST00000537335 SLPIP03973 132 aa9.05□□□□□ -0.96
POLR1B-216ENST00000537335 P0C879 139 aa9.05□□□□□ -0.96
POLR1B-216ENST00000537335 IGLV3-9A0A075B6K5 115 aa9.04□□□□□ -0.96
POLR1B-216ENST00000537335 PSCAO43653 123 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms