RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 C19orf54Q5BKX5 351 aa16.24■□□□□ 0.19
TRIM3-214ENST00000536344 SHISA2Q6UWI4 295 aa16.24■□□□□ 0.19
TRIM3-214ENST00000536344 OR11H1Q8NG94 326 aa16.24■□□□□ 0.19
TRIM3-214ENST00000536344 OR11H2Q8NH07 326 aa16.24■□□□□ 0.19
TRIM3-214ENST00000536344 PSMG3-AS1Q96PY0 264 aa16.24■□□□□ 0.19
TRIM3-214ENST00000536344 HIST2H2BDQ6DRA6 164 aa16.23■□□□□ 0.19
TRIM3-214ENST00000536344 CLPSL1A2RUU4 121 aa16.22■□□□□ 0.19
TRIM3-214ENST00000536344 UNQ9165/PRO28630Q6UXU0 137 aa16.22■□□□□ 0.19
TRIM3-214ENST00000536344 LYPD1Q8N2G4 141 aa16.22■□□□□ 0.19
TRIM3-214ENST00000536344 MYOZ3Q8TDC0 251 aa16.22■□□□□ 0.19
TRIM3-214ENST00000536344 A0A087WX48 190 aa16.22■□□□□ 0.19
TRIM3-214ENST00000536344 RNF182Q8N6D2 247 aa16.22■□□□□ 0.19
TRIM3-214ENST00000536344 MYMXA0A1B0GTQ4 84 aa16.21■□□□□ 0.19
TRIM3-214ENST00000536344 IGF1P05019 195 aa16.21■□□□□ 0.19
TRIM3-214ENST00000536344 LGALS1P09382 135 aaKnown RBP16.21■□□□□ 0.19
TRIM3-214ENST00000536344 Q8N8P6 123 aa16.21■□□□□ 0.19
TRIM3-214ENST00000536344 PLEKHB2Q96CS7 222 aa16.21■□□□□ 0.19
TRIM3-214ENST00000536344 ARL3P36405 182 aa16.2■□□□□ 0.18
TRIM3-214ENST00000536344 PSMG4Q5JS54 123 aa16.2■□□□□ 0.18
TRIM3-214ENST00000536344 H3BVH4 76 aa16.2■□□□□ 0.18
TRIM3-214ENST00000536344 NHLRC4P0CG21 123 aaPredicted RBP16.2■□□□□ 0.18
TRIM3-214ENST00000536344 ERCC8Q13216 396 aa16.2■□□□□ 0.18
TRIM3-214ENST00000536344 ATP6V0E2Q8NHE4 81 aa16.2■□□□□ 0.18
TRIM3-214ENST00000536344 SORL1Q92673 2214 aa16.2■□□□□ 0.18
TRIM3-214ENST00000536344 IGKV3-7A0A075B6H7 116 aa16.19■□□□□ 0.18
TRIM3-214ENST00000536344 TRBV7-1A0A0A6YYK4 115 aa16.19■□□□□ 0.18
TRIM3-214ENST00000536344 SCGB2A1O75556 95 aa16.19■□□□□ 0.18
TRIM3-214ENST00000536344 CFAP161Q6P656 301 aa16.19■□□□□ 0.18
TRIM3-214ENST00000536344 BUB3O43684 328 aa16.18■□□□□ 0.18
TRIM3-214ENST00000536344 RPL7P18124 248 aaKnown RBP16.18■□□□□ 0.18
TRIM3-214ENST00000536344 EDN2P20800 178 aa16.18■□□□□ 0.18
TRIM3-214ENST00000536344 GAGE5Q13069 117 aa16.18■□□□□ 0.18
TRIM3-214ENST00000536344 GAGE6Q13070 117 aa16.18■□□□□ 0.18
TRIM3-214ENST00000536344 J3QLI3 93 aa16.18■□□□□ 0.18
TRIM3-214ENST00000536344 TCL1BO95988 128 aa16.18■□□□□ 0.18
TRIM3-214ENST00000536344 Q6ZQT7 251 aa16.18■□□□□ 0.18
TRIM3-214ENST00000536344 IGHG4P01861 327 aa16.17■□□□□ 0.18
TRIM3-214ENST00000536344 LAGE3Q14657 143 aa16.17■□□□□ 0.18
TRIM3-214ENST00000536344 KLHL30-AS1Q8NEE0 82 aa16.17■□□□□ 0.18
TRIM3-214ENST00000536344 TRBV20-1A0A075B6N2 111 aa16.17■□□□□ 0.18
TRIM3-214ENST00000536344 PPDPFLQ8WWR9 84 aa16.17■□□□□ 0.18
TRIM3-214ENST00000536344 WNK1Q9H4A3 2382 aa16.16■□□□□ 0.18
TRIM3-214ENST00000536344 TMEM78Q5T7P6 136 aa16.16■□□□□ 0.18
TRIM3-214ENST00000536344 TEN1Q86WV5 123 aa16.16■□□□□ 0.18
TRIM3-214ENST00000536344 LRRC75A-AS1Q8N1F1 130 aa16.16■□□□□ 0.18
TRIM3-214ENST00000536344 NIPBLQ6KC79 2804 aaeCLIP16.15■□□□□ 0.18
TRIM3-214ENST00000536344 FAM223BA6NKX1 122 aa16.15■□□□□ 0.18
TRIM3-214ENST00000536344 FAM223AQ8IWN6 122 aa16.15■□□□□ 0.18
TRIM3-214ENST00000536344 PRAC2D3DTV9 90 aa16.15■□□□□ 0.18
TRIM3-214ENST00000536344 SPRY2O43597 315 aa16.15■□□□□ 0.18
TRIM3-214ENST00000536344 ZFAND6Q6FIF0 208 aa16.15■□□□□ 0.18
TRIM3-214ENST00000536344 NRACQ8N912 160 aa16.15■□□□□ 0.18
TRIM3-214ENST00000536344 METTL26Q96S19 204 aa16.15■□□□□ 0.18
TRIM3-214ENST00000536344 CRIP2P52943 208 aaPredicted RBP16.14■□□□□ 0.17
TRIM3-214ENST00000536344 ANKRD29Q8N6D5 301 aa16.14■□□□□ 0.17
TRIM3-214ENST00000536344 C11orf21Q9P2W6 132 aa16.14■□□□□ 0.17
TRIM3-214ENST00000536344 PLNP26678 52 aa16.14■□□□□ 0.17
TRIM3-214ENST00000536344 SRSF9Q13242 221 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRIM3-214ENST00000536344 CNFNQ9BYD5 112 aa16.14■□□□□ 0.17
TRIM3-214ENST00000536344 F8VRH5 84 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 HERV-K104P63124 156 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 SCGB1D4Q6XE38 83 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 TEX29Q8N6K0 151 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 PRADC1Q9BSG0 188 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 ZNF815PA8K554 130 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 KLK9Q2XQG4 91 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 VPREB3Q9UKI3 123 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 KLK9Q9UKQ9 250 aa16.13■□□□□ 0.17
TRIM3-214ENST00000536344 CCDC179H3BU77 68 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 UBE2D1P51668 147 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 DEFB1P60022 68 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 UBE2D3P61077 147 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 UBE2D2P62837 147 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 DEFB104AQ8WTQ1 72 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 IGKV3D-20A0A0C4DH25 116 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 H7C1H1 209 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 FSHBP01225 129 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 ZNF688P0C7X2 276 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 SRD5A1P18405 259 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 RPL11P62913 178 aaKnown RBP16.12■□□□□ 0.17
TRIM3-214ENST00000536344 Q6YL49 198 aa16.12■□□□□ 0.17
TRIM3-214ENST00000536344 CRLF1O75462 422 aa16.11■□□□□ 0.17
TRIM3-214ENST00000536344 IGLV1-40P01703 118 aa16.11■□□□□ 0.17
TRIM3-214ENST00000536344 PDE6HQ13956 83 aa16.11■□□□□ 0.17
TRIM3-214ENST00000536344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.11■□□□□ 0.17
TRIM3-214ENST00000536344 COX8CQ7Z4L0 72 aa16.11■□□□□ 0.17
TRIM3-214ENST00000536344 FABP5P3A8MUU1 101 aa16.1■□□□□ 0.17
TRIM3-214ENST00000536344 SMIM20Q8N5G0 67 aa16.1■□□□□ 0.17
TRIM3-214ENST00000536344 CD7P09564 240 aa16.1■□□□□ 0.17
TRIM3-214ENST00000536344 EMP1P54849 157 aa16.1■□□□□ 0.17
TRIM3-214ENST00000536344 TRAV4A0A0B4J268 109 aa16.09■□□□□ 0.17
TRIM3-214ENST00000536344 CFHR3Q02985 330 aa16.09■□□□□ 0.17
TRIM3-214ENST00000536344 TRBV7-9A0A0J9YWB2 115 aa16.09■□□□□ 0.17
TRIM3-214ENST00000536344 CITED1Q99966 193 aa16.09■□□□□ 0.17
TRIM3-214ENST00000536344 OTOGQ6ZRI0 2925 aa16.08■□□□□ 0.16
TRIM3-214ENST00000536344 A8MWV9 139 aa16.07■□□□□ 0.16
TRIM3-214ENST00000536344 LINC01559Q495D7 138 aa16.07■□□□□ 0.16
TRIM3-214ENST00000536344 NDUFA11Q86Y39 141 aa16.07■□□□□ 0.16
TRIM3-214ENST00000536344 RASL10AQ92737 203 aa16.07■□□□□ 0.16
TRIM3-214ENST00000536344 USMG5Q96IX5 58 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms