RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 NOP16Q9Y3C1 178 aaKnown RBP0□□□□□ -2.41
BRCA2-205ENST00000533776 NCOR2Q9Y618 2525 aa0□□□□□ -2.41
BRCA2-205ENST00000533776 TPRP12270 2363 aaKnown RBP-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 ARFGEF1Q9Y6D6 1849 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 CELSR1Q9NYQ6 3014 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 SOGA1O94964 1423 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 GVQW2A0A096LPI5 108 aaPredicted RBP-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 MIC13Q5XKP0 118 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 NDUFA11Q86Y39 141 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 SPANXCQ9NY87 97 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 GSKIPQ9P0R6 139 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 NDUFA12Q9UI09 145 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 CELSR2Q9HCU4 2923 aa-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 HRNRQ86YZ3 2850 aaPredicted RBP-0.01□□□□□ -2.41
BRCA2-205ENST00000533776 PIEZO1Q92508 2521 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 BICRAQ9NZM4 1560 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 KIAA0100Q14667 2235 aaKnown RBP-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 DISP2A7MBM2 1401 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 FHAD1B1AJZ9 1412 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 UBR5O95071 2799 aaPredicted RBP-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 POLQO75417 2590 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 J3QLW9 94 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 SPINK6Q6UWN8 80 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 VMO1Q7Z5L0 202 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 MAGOHBQ96A72 148 aaKnown RBP-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 TMEM141Q96I45 108 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 SDF2Q99470 211 aa-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 DSTQ03001 7570 aaKnown RBP-0.02□□□□□ -2.41
BRCA2-205ENST00000533776 CDK13Q14004 1512 aaKnown RBP-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 ABCA12Q86UK0 2595 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 TRAV12-2A0A075B6T6 113 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 TRAV12-3A0A0B4J271 114 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 RBP4P02753 201 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 C10orf82Q8WW14 230 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 DSCR8Q96T75 97 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 SPRR2GQ9BYE4 73 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 SMIM3Q9BZL3 60 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 BET1LQ9NYM9 111 aa-0.03□□□□□ -2.41
BRCA2-205ENST00000533776 PARP14Q460N5 1801 aa-0.03□□□□□ -2.42
BRCA2-205ENST00000533776 ZNF670-ZNF695F2Z2N8 137 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 CCDC179H3BU77 68 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 YPEL1O60688 119 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 NCR2O95944 276 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 SMIM21Q3B7S5 101 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 Q6ZUT4 128 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 C20orf197Q8N268 126 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 VSTM2AQ8TAG5 236 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 BATF3Q9NR55 127 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 ERG28Q9UKR5 140 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 CSMD3Q7Z407 3707 aa-0.04□□□□□ -2.42
BRCA2-205ENST00000533776 LAMC3Q9Y6N6 1575 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 FOCADQ5VW36 1801 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 TCRBV3S1A0A5B6 114 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 NPFFO15130 113 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 PIRTP0C851 137 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 UBE2D1P51668 147 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 NCS1P62166 190 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 C9orf116Q5BN46 136 aaPredicted RBP-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 SLC48A1Q6P1K1 146 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 CTAGE3PQ8IX95 158 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 COX7B2Q8TF08 81 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 ANP32BQ92688 251 aaKnown RBP-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 VPS25Q9BRG1 176 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 ZMYM4Q5VZL5 1548 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 CADP27708 2225 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 PHLPP1O60346 1717 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 GOLGA3Q08378 1498 aa-0.05□□□□□ -2.42
BRCA2-205ENST00000533776 IBTKQ9P2D0 1353 aaPredicted RBP-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 TMEM2Q9UHN6 1383 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 UNC13BO14795 1591 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 G3V318 75 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 RPS25P62851 125 aaKnown RBP-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 SSBP1Q04837 148 aaKnown RBP-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 SPCS2Q15005 226 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 CYP2G1PQ6ZSU1 146 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 MMGT1Q8N4V1 131 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 BPESC1Q9GZL8 116 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 COA4Q9NYJ1 87 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 DOCK11Q5JSL3 2073 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 MYOM3Q5VTT5 1437 aa-0.06□□□□□ -2.42
BRCA2-205ENST00000533776 TRGV1A0A0A0MS02 117 aa-0.07□□□□□ -2.42
BRCA2-205ENST00000533776 MCRIP1C9JLW8 97 aa-0.07□□□□□ -2.42
BRCA2-205ENST00000533776 APOC1P02654 83 aa-0.07□□□□□ -2.42
BRCA2-205ENST00000533776 C4orf33Q8N1A6 199 aa-0.07□□□□□ -2.42
BRCA2-205ENST00000533776 SMIM11BQ8TCY0 68 aa-0.07□□□□□ -2.42
BRCA2-205ENST00000533776 MAFIPQ8WZ33 124 aa-0.07□□□□□ -2.42
BRCA2-205ENST00000533776 SAR1AQ9NR31 198 aa-0.07□□□□□ -2.42
BRCA2-205ENST00000533776 LAMC1P11047 1609 aa-0.07□□□□□ -2.42
BRCA2-205ENST00000533776 HMCN2Q8NDA2 5059 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 CHD9Q3L8U1 2897 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 TRBV7-1A0A0A6YYK4 115 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 RBAKDNA6NC62 111 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 M0R2Z0 102 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 NMBP08949 121 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 EDDM3BP56851 147 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 UBE2G1P62253 170 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 SPANXN1Q5VSR9 72 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 Q6ZRX8 168 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 TSTD1Q8NFU3 115 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms