RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 FGF13Q92913 245 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 WFDC6Q9BQY6 131 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 ZNRD1Q9P1U0 126 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 ASAH2BP0C7U1 165 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 SSR2P43308 183 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 CRIP2P52943 208 aaPredicted RBP3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 DPTQ07507 201 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 MIAQ16674 131 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 Q6ZTC4 211 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 SBSPONQ8IVN8 264 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 OR5AS1Q8N127 324 aa3.54□□□□□ -1.84
ECHDC1-222ENST00000531967 CCL4P13236 92 aa3.53□□□□□ -1.84
ECHDC1-222ENST00000531967 ZNF816Q0VGE8 651 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-222ENST00000531967 ZNF563Q8TA94 476 aa3.53□□□□□ -1.84
ECHDC1-222ENST00000531967 LINC00574Q9H8X3 128 aa3.53□□□□□ -1.84
ECHDC1-222ENST00000531967 CABIN1Q9Y6J0 2220 aa3.53□□□□□ -1.84
ECHDC1-222ENST00000531967 EXPH5Q8NEV8 1989 aa3.53□□□□□ -1.85
ECHDC1-222ENST00000531967 COL8A2P25067 703 aa3.53□□□□□ -1.85
ECHDC1-222ENST00000531967 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.85
ECHDC1-222ENST00000531967 TSKUQ8WUA8 353 aa3.53□□□□□ -1.85
ECHDC1-222ENST00000531967 ODF3Q96PU9 254 aa3.53□□□□□ -1.85
ECHDC1-222ENST00000531967 MGST2Q99735 147 aa3.53□□□□□ -1.85
ECHDC1-222ENST00000531967 U3KQK5 164 aa3.53□□□□□ -1.85
ECHDC1-222ENST00000531967 SCN3AQ9NY46 2000 aa3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 HMGA1P17096 107 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 SUPT4H1P63272 117 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 UBE2L3P68036 154 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 CIRBPQ14011 172 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 SS18Q15532 418 aa3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 COL4A6Q14031 1691 aa3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 PTPRBP23467 1997 aa3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 C2orf70A6NJV1 201 aa3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 DSCR4P56555 118 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 FP248Q71RG6 208 aaPredicted RBP3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 NXT2Q9NPJ8 142 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 TAS2R4Q9NYW5 299 aa3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 TMEM14AQ9Y6G1 99 aa3.52□□□□□ -1.85
ECHDC1-222ENST00000531967 F2Z2F3 143 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 SPINT3P49223 89 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 ZNF117Q03924 483 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 CLEC2BQ92478 149 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 SMIM7Q9BQ49 75 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 MED12LQ86YW9 2145 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 TRAV17A0A0B4J275 112 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 CPSF4LA6NMK7 179 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 CCL8P80075 99 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 KRTAP1-3Q8IUG1 177 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 CCL4L1Q8NHW4 92 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 CHCHD1Q96BP2 118 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 ICOSQ9Y6W8 199 aa3.51□□□□□ -1.85
ECHDC1-222ENST00000531967 CPAMD8Q8IZJ3 1885 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 IGHV3-73A0A0B4J1V6 119 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 IFI6P09912 130 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 HIGD1BQ9P298 99 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 GTF3C1Q12789 2109 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 TIMM17BO60830 172 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 SAA1P0DJI8 122 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 RPL28P46779 137 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 Q6P435 159 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 C6orf201Q7Z4U5 140 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 LYPD6Q86Y78 171 aa3.5□□□□□ -1.85
ECHDC1-222ENST00000531967 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 A0A0B4J2C4 111 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 UBE2L5PA0A1B0GUS4 154 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 PSMG4Q5JS54 123 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 NABP2Q9BQ15 211 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 ZNF355PQ9NSJ1 428 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 CENPFP49454 3210 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 CEP350Q5VT06 3117 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 HEATR5BQ9P2D3 2071 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 IGHV1-24A0A0C4DH33 117 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 A0A1W2PQD3 144 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 A6NN06 94 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 H7C423 109 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 CFC1P0CG37 223 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 PEBP1P30086 187 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 LINC01590Q5TEZ4 76 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 FAM19A2Q8N3H0 131 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 SERP2Q8N6R1 65 aa3.49□□□□□ -1.85
ECHDC1-222ENST00000531967 IGKV1OR2-108A0A075B7D4 117 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 A8MUU9 505 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 CKS2P33552 79 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 XCL1P47992 114 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 EFNA4P52798 201 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 ATP11AUNQ6ZP68 121 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 Q8NDZ9 215 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 NHP2Q9NX24 153 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 GNG13Q9P2W3 67 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 IGHV3-15A0A0B4J1V0 119 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 HMGN2P05204 90 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 MSMBP08118 114 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 KIF26BQ2KJY2 2108 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 FAM229BQ4G0N7 80 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 C1orf64Q8NEQ6 169 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 TET1Q8NFU7 2136 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 Q96M85 177 aa3.48□□□□□ -1.85
ECHDC1-222ENST00000531967 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms