RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CEBPGP53567 150 aa11.9□□□□□ -0.5
LMX1B-203ENST00000526117 RAB14P61106 215 aa11.9□□□□□ -0.5
LMX1B-203ENST00000526117 CT83Q5H943 113 aa11.9□□□□□ -0.5
LMX1B-203ENST00000526117 CNFNQ9BYD5 112 aa11.9□□□□□ -0.5
LMX1B-203ENST00000526117 SAMD10Q9BYL1 202 aa11.9□□□□□ -0.5
LMX1B-203ENST00000526117 C9JQL5 133 aa11.89□□□□□ -0.51
LMX1B-203ENST00000526117 CTRLP40313 264 aa11.89□□□□□ -0.51
LMX1B-203ENST00000526117 CACNG7P62955 275 aa11.89□□□□□ -0.51
LMX1B-203ENST00000526117 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
LMX1B-203ENST00000526117 LYPD5Q6UWN5 251 aa11.89□□□□□ -0.51
LMX1B-203ENST00000526117 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
LMX1B-203ENST00000526117 IGHV3-73A0A0B4J1V6 119 aa11.88□□□□□ -0.51
LMX1B-203ENST00000526117 LINC00694P0DN24 101 aa11.88□□□□□ -0.51
LMX1B-203ENST00000526117 GZMBP10144 247 aa11.88□□□□□ -0.51
LMX1B-203ENST00000526117 CLLU1Q5K131 121 aa11.88□□□□□ -0.51
LMX1B-203ENST00000526117 TRBV10-1A0A0K0K1A3 114 aa11.87□□□□□ -0.51
LMX1B-203ENST00000526117 LOC100131303A0A0U1RQF7 123 aa11.87□□□□□ -0.51
LMX1B-203ENST00000526117 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
LMX1B-203ENST00000526117 Q6ZSN1 163 aa11.87□□□□□ -0.51
LMX1B-203ENST00000526117 AP1S3Q96PC3 154 aa11.87□□□□□ -0.51
LMX1B-203ENST00000526117 Q9H8V8 135 aa11.87□□□□□ -0.51
LMX1B-203ENST00000526117 OSTCQ9NRP0 149 aa11.87□□□□□ -0.51
LMX1B-203ENST00000526117 A0A087WWL8 130 aa11.86□□□□□ -0.51
LMX1B-203ENST00000526117 FOXA3P55318 350 aaPredicted RBP11.86□□□□□ -0.51
LMX1B-203ENST00000526117 RAB4BP61018 213 aa11.86□□□□□ -0.51
LMX1B-203ENST00000526117 IFITM2Q01629 132 aa11.86□□□□□ -0.51
LMX1B-203ENST00000526117 TMEM241Q24JQ0 296 aa11.86□□□□□ -0.51
LMX1B-203ENST00000526117 FAM74A4Q5TZK3 123 aa11.86□□□□□ -0.51
LMX1B-203ENST00000526117 NAT8Q9UHE5 227 aa11.86□□□□□ -0.51
LMX1B-203ENST00000526117 KIF25-AS1Q9Y6Z4 181 aa11.86□□□□□ -0.51
LMX1B-203ENST00000526117 NBDYA0A0U1RRE5 68 aa11.85□□□□□ -0.51
LMX1B-203ENST00000526117 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
LMX1B-203ENST00000526117 A8MWL6 223 aa11.85□□□□□ -0.51
LMX1B-203ENST00000526117 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
LMX1B-203ENST00000526117 BTF3P20290 206 aaKnown RBP11.85□□□□□ -0.51
LMX1B-203ENST00000526117 ERVFC1-1P60608 527 aa11.85□□□□□ -0.51
LMX1B-203ENST00000526117 TTC32Q5I0X7 151 aa11.85□□□□□ -0.51
LMX1B-203ENST00000526117 LYZL1Q6UWQ5 148 aa11.85□□□□□ -0.51
LMX1B-203ENST00000526117 K7EP13 123 aa11.84□□□□□ -0.51
LMX1B-203ENST00000526117 C14orf178Q8N769 122 aaPredicted RBP11.84□□□□□ -0.51
LMX1B-203ENST00000526117 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
LMX1B-203ENST00000526117 GFRA4Q9GZZ7 299 aa11.84□□□□□ -0.51
LMX1B-203ENST00000526117 IGLV2-18A0A075B6J9 118 aa11.83□□□□□ -0.52
LMX1B-203ENST00000526117 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
LMX1B-203ENST00000526117 LINC00315P59091 139 aa11.83□□□□□ -0.52
LMX1B-203ENST00000526117 RPL23P62829 140 aaKnown RBP11.83□□□□□ -0.52
LMX1B-203ENST00000526117 SOHLH1Q5JUK2 328 aa11.83□□□□□ -0.52
LMX1B-203ENST00000526117 OR10G8Q8NGN5 311 aa11.83□□□□□ -0.52
LMX1B-203ENST00000526117 GTSF1Q8WW33 167 aa11.83□□□□□ -0.52
LMX1B-203ENST00000526117 TPPP3Q9BW30 176 aa11.83□□□□□ -0.52
LMX1B-203ENST00000526117 MUC21A0A0G2JKD1 596 aa11.82□□□□□ -0.52
LMX1B-203ENST00000526117 MUC21A0A140T8X8 626 aa11.82□□□□□ -0.52
LMX1B-203ENST00000526117 SIVA1O15304 175 aa11.82□□□□□ -0.52
LMX1B-203ENST00000526117 SMIM17P0DL12 118 aa11.82□□□□□ -0.52
LMX1B-203ENST00000526117 C15orf54Q8N8G6 183 aa11.82□□□□□ -0.52
LMX1B-203ENST00000526117 ATP6V0E2Q8NHE4 81 aa11.82□□□□□ -0.52
LMX1B-203ENST00000526117 GTSF1LQ9H1H1 148 aa11.82□□□□□ -0.52
LMX1B-203ENST00000526117 NTF3P20783 257 aa11.81□□□□□ -0.52
LMX1B-203ENST00000526117 LINC00336Q6ZUF6 198 aa11.81□□□□□ -0.52
LMX1B-203ENST00000526117 TSKUQ8WUA8 353 aa11.81□□□□□ -0.52
LMX1B-203ENST00000526117 M0R2N4 97 aa11.8□□□□□ -0.52
LMX1B-203ENST00000526117 ZNF56Q15929 161 aa11.8□□□□□ -0.52
LMX1B-203ENST00000526117 LELP1Q5T871 98 aa11.8□□□□□ -0.52
LMX1B-203ENST00000526117 MSRB1Q9NZV6 116 aa11.8□□□□□ -0.52
LMX1B-203ENST00000526117 V9GYV3 84 aa11.8□□□□□ -0.52
LMX1B-203ENST00000526117 FRAS1Q86XX4 4008 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 GAGE12JA6NER3 117 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 DNAH10OSP0CZ25 163 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 RPL36AP83881 106 aaKnown RBP11.79□□□□□ -0.52
LMX1B-203ENST00000526117 GAGE1Q13065 139 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 GAGE4Q13068 117 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 GAGE5Q13069 117 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 GAGE13Q4V321 117 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 RPL36ALQ969Q0 106 aaKnown RBP11.79□□□□□ -0.52
LMX1B-203ENST00000526117 DPH3P1Q9H4G8 78 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 Q9UF83 564 aa11.79□□□□□ -0.52
LMX1B-203ENST00000526117 DNAH2Q9P225 4427 aa11.78□□□□□ -0.52
LMX1B-203ENST00000526117 DNAH10Q8IVF4 4471 aa11.78□□□□□ -0.52
LMX1B-203ENST00000526117 A0A087WWC5 75 aa11.78□□□□□ -0.52
LMX1B-203ENST00000526117 UBE2D3P61077 147 aa11.78□□□□□ -0.52
LMX1B-203ENST00000526117 UBE2D2P62837 147 aa11.78□□□□□ -0.52
LMX1B-203ENST00000526117 ADIRFQ15847 76 aa11.78□□□□□ -0.52
LMX1B-203ENST00000526117 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
LMX1B-203ENST00000526117 H7C1H1 209 aa11.77□□□□□ -0.53
LMX1B-203ENST00000526117 RTL8CO15255 209 aa11.77□□□□□ -0.53
LMX1B-203ENST00000526117 EVI2AP22794 236 aa11.77□□□□□ -0.53
LMX1B-203ENST00000526117 TWIST1Q15672 202 aa11.77□□□□□ -0.53
LMX1B-203ENST00000526117 UQCC3Q6UW78 93 aa11.77□□□□□ -0.53
LMX1B-203ENST00000526117 KRTAP1-5Q9BYS1 174 aa11.77□□□□□ -0.53
LMX1B-203ENST00000526117 HIGD1CA8MV81 97 aa11.76□□□□□ -0.53
LMX1B-203ENST00000526117 M0QY20 66 aa11.76□□□□□ -0.53
LMX1B-203ENST00000526117 SSTP61278 116 aa11.76□□□□□ -0.53
LMX1B-203ENST00000526117 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
LMX1B-203ENST00000526117 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
LMX1B-203ENST00000526117 C6orf223Q8N319 242 aa11.76□□□□□ -0.53
LMX1B-203ENST00000526117 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
LMX1B-203ENST00000526117 TRAV9-2A0A087WT02 112 aa11.75□□□□□ -0.53
LMX1B-203ENST00000526117 TRAV8-6A0A0B4J262 113 aa11.75□□□□□ -0.53
LMX1B-203ENST00000526117 A0A1B0GUT8 65 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms