RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 H3BMM0 161 aa7.77□□□□□ -1.17
PDGFRB-207ENST00000520579 CIRBPQ14011 172 aaKnown RBP7.77□□□□□ -1.17
PDGFRB-207ENST00000520579 UBE2WQ96B02 151 aa7.77□□□□□ -1.17
PDGFRB-207ENST00000520579 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
PDGFRB-207ENST00000520579 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
PDGFRB-207ENST00000520579 C2orf48Q96LS8 159 aa7.77□□□□□ -1.17
PDGFRB-207ENST00000520579 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
PDGFRB-207ENST00000520579 F8VRH5 84 aa7.77□□□□□ -1.17
PDGFRB-207ENST00000520579 IGKV3-20P01619 116 aa7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 IGLV1-44P01699 117 aa7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 LOXP28300 417 aaPredicted RBP7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 RPL39P62891 51 aaKnown RBP7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 BSNQ9UPA5 3926 aa7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 NBL1P41271 181 aa7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 C2orf66Q6UXQ4 117 aa7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 BSPH1Q075Z2 132 aa7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 C2orf82Q6UX34 121 aa7.76□□□□□ -1.17
PDGFRB-207ENST00000520579 IGKV3D-20A0A0C4DH25 116 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 HTN1P15515 57 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 MRGPRG-AS1Q2M3A8 158 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 Q6ZS92 163 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 U3KQK5 164 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 COL12A1Q99715 3063 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 A0A087WWL8 130 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 C17orf100A8MU93 164 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 C8orf31Q8N9H6 132 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 IGLV3-9A0A075B6K5 115 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 TAL2Q16559 108 aa7.75□□□□□ -1.17
PDGFRB-207ENST00000520579 OTOGLQ3ZCN5 2332 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 MRPS12O15235 138 aaKnown RBP7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 RNASE13Q5GAN3 156 aaKnown RBP7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 CLEC19AQ6UXS0 136 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 SEM1Q6ZVN7 128 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 TMEM14CQ9P0S9 112 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 PHLDA3Q9Y5J5 127 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 PLNP26678 52 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 PAX8Q06710 450 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 C11orf86A6NJI1 115 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 OVOL1O14753 267 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 DKK4Q9UBT3 224 aa7.74□□□□□ -1.17
PDGFRB-207ENST00000520579 F6UB75 175 aa7.73□□□□□ -1.17
PDGFRB-207ENST00000520579 Q6ZSV7 163 aa7.73□□□□□ -1.17
PDGFRB-207ENST00000520579 TMEM86BQ8N661 226 aa7.73□□□□□ -1.17
PDGFRB-207ENST00000520579 M0R2P5 195 aa7.73□□□□□ -1.17
PDGFRB-207ENST00000520579 J3QQQ9 107 aa7.73□□□□□ -1.17
PDGFRB-207ENST00000520579 COX7CP15954 63 aa7.73□□□□□ -1.17
PDGFRB-207ENST00000520579 LGALS3P17931 250 aaKnown RBP7.73□□□□□ -1.17
PDGFRB-207ENST00000520579 FAM19A4Q96LR4 140 aa7.73□□□□□ -1.17
PDGFRB-207ENST00000520579 TMEM178BH3BS89 294 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 K7EM74 188 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 LY6DQ14210 128 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 NDUFA11Q86Y39 141 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 TP53TG1Q9Y2A0 90 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 TRAV17A0A0B4J275 112 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 CRYGBP07316 175 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 ELANEP08246 267 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 ZNF22P17026 224 aaPredicted RBP7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 C16orf92Q96LL3 132 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 ZNF580Q9UK33 172 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 IGHV3OR16-10A0A075B7F0 116 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 RNASE4P34096 147 aaKnown RBP7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 PVRIGQ6DKI7 326 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 ZMAT4Q9H898 229 aa7.72□□□□□ -1.17
PDGFRB-207ENST00000520579 SPTBN4Q9H254 2564 aa7.71□□□□□ -1.17
PDGFRB-207ENST00000520579 BUB1B-PAK6H3BSN5 160 aa7.71□□□□□ -1.17
PDGFRB-207ENST00000520579 GNRH2O43555 120 aa7.71□□□□□ -1.17
PDGFRB-207ENST00000520579 CFC1BP0CG36 223 aa7.71□□□□□ -1.17
PDGFRB-207ENST00000520579 CFC1P0CG37 223 aa7.71□□□□□ -1.17
PDGFRB-207ENST00000520579 SMAD5-AS1Q9Y6J3 95 aa7.71□□□□□ -1.17
PDGFRB-207ENST00000520579 PTPN13Q12923 2485 aa7.71□□□□□ -1.17
PDGFRB-207ENST00000520579 CCL21O00585 134 aa7.71□□□□□ -1.18
PDGFRB-207ENST00000520579 SUMO2P61956 95 aaKnown RBP7.71□□□□□ -1.18
PDGFRB-207ENST00000520579 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.71□□□□□ -1.18
PDGFRB-207ENST00000520579 TSPEAR-AS2P59090 65 aa7.71□□□□□ -1.18
PDGFRB-207ENST00000520579 ZNF672Q499Z4 452 aaPredicted RBP7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 PRO1854Q9UHT4 67 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 DCHS2Q6V1P9 2916 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 NBR2O15453 112 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 PSMG4Q5JS54 123 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 Q5XG85 94 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 DAND5Q8N907 189 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 NRACQ8N912 160 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 DEFB124Q8NES8 71 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 CLEC2BQ92478 149 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 EEF1AKMT3Q96AZ1 226 aa7.7□□□□□ -1.18
PDGFRB-207ENST00000520579 INS-IGF2F8WCM5 200 aa7.69□□□□□ -1.18
PDGFRB-207ENST00000520579 G3V318 75 aa7.69□□□□□ -1.18
PDGFRB-207ENST00000520579 TMEM258P61165 79 aa7.69□□□□□ -1.18
PDGFRB-207ENST00000520579 TRAV8-3A0A0A6YYJ7 113 aa7.69□□□□□ -1.18
PDGFRB-207ENST00000520579 LGALS9O00182 355 aa7.69□□□□□ -1.18
PDGFRB-207ENST00000520579 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
PDGFRB-207ENST00000520579 C15orf32Q32M92 178 aa7.69□□□□□ -1.18
PDGFRB-207ENST00000520579 IGHV3-73A0A0B4J1V6 119 aa7.69□□□□□ -1.18
PDGFRB-207ENST00000520579 PRR9Q5T870 116 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 LYPD1Q8N2G4 141 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 ZNF625Q96I27 306 aaPredicted RBP7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 SPANXCQ9NY87 97 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms