RNA–Protein interactions for RNA: ENST00000518872.1

SYNPO-203, Transcript of synaptopodin, humanhuman

TSL 5

Gene SYNPO, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-203ENST00000518872 IBA57-AS1B1ANH7 110 aa19.99■□□□□ 0.79
SYNPO-203ENST00000518872 SULT1A2P50226 295 aa19.98■□□□□ 0.79
SYNPO-203ENST00000518872 CCL20P78556 96 aa19.98■□□□□ 0.79
SYNPO-203ENST00000518872 C14orf178Q8N769 122 aaPredicted RBP19.98■□□□□ 0.79
SYNPO-203ENST00000518872 APOBP04114 4563 aaKnown RBP19.97■□□□□ 0.79
SYNPO-203ENST00000518872 GAGE12JA6NER3 117 aa19.97■□□□□ 0.79
SYNPO-203ENST00000518872 TEX46H3BTG2 121 aa19.97■□□□□ 0.79
SYNPO-203ENST00000518872 C1QBP02746 253 aa19.97■□□□□ 0.79
SYNPO-203ENST00000518872 GAGE1Q13065 139 aa19.97■□□□□ 0.79
SYNPO-203ENST00000518872 GAGE4Q13068 117 aa19.97■□□□□ 0.79
SYNPO-203ENST00000518872 GAGE5Q13069 117 aa19.97■□□□□ 0.79
SYNPO-203ENST00000518872 GAGE13Q4V321 117 aa19.97■□□□□ 0.79
SYNPO-203ENST00000518872 Q6ZNX1 250 aa19.97■□□□□ 0.79
SYNPO-203ENST00000518872 M0R381 172 aa19.96■□□□□ 0.79
SYNPO-203ENST00000518872 RPL35P42766 123 aaKnown RBP19.96■□□□□ 0.79
SYNPO-203ENST00000518872 GNG13Q9P2W3 67 aa19.96■□□□□ 0.79
SYNPO-203ENST00000518872 Q9UF83 564 aa19.96■□□□□ 0.79
SYNPO-203ENST00000518872 FAM74A4Q5TZK3 123 aa19.95■□□□□ 0.78
SYNPO-203ENST00000518872 SSBP4Q9BWG4 385 aaPredicted RBP19.95■□□□□ 0.78
SYNPO-203ENST00000518872 A0A087WWC5 75 aa19.94■□□□□ 0.78
SYNPO-203ENST00000518872 SNAI2O43623 268 aa19.94■□□□□ 0.78
SYNPO-203ENST00000518872 LAGE3Q14657 143 aa19.94■□□□□ 0.78
SYNPO-203ENST00000518872 SLC51BQ86UW2 128 aa19.94■□□□□ 0.78
SYNPO-203ENST00000518872 A0A087WWL8 130 aa19.93■□□□□ 0.78
SYNPO-203ENST00000518872 TRBV10-1A0A0K0K1A3 114 aa19.93■□□□□ 0.78
SYNPO-203ENST00000518872 RPL19P84098 196 aaKnown RBP19.93■□□□□ 0.78
SYNPO-203ENST00000518872 OR5AL1P0C617 328 aa19.92■□□□□ 0.78
SYNPO-203ENST00000518872 DERL1Q9BUN8 251 aa19.91■□□□□ 0.78
SYNPO-203ENST00000518872 OR10AG1Q8NH19 301 aa19.9■□□□□ 0.78
SYNPO-203ENST00000518872 SMIM12Q96EX1 92 aa19.9■□□□□ 0.78
SYNPO-203ENST00000518872 IGHV3-30P01768 117 aa19.89■□□□□ 0.77
SYNPO-203ENST00000518872 IGHV3-33P01772 117 aa19.89■□□□□ 0.77
SYNPO-203ENST00000518872 IGHV3-30-3P0DP02 117 aa19.89■□□□□ 0.77
SYNPO-203ENST00000518872 IGHV3-30-5P0DP03 117 aa19.89■□□□□ 0.77
SYNPO-203ENST00000518872 PRR27Q6MZM9 219 aa19.89■□□□□ 0.77
SYNPO-203ENST00000518872 MEF2BQ02080 365 aaPredicted RBP19.88■□□□□ 0.77
SYNPO-203ENST00000518872 PDE6DO43924 150 aa19.87■□□□□ 0.77
SYNPO-203ENST00000518872 KRTAP4-5Q9BYR2 181 aa19.87■□□□□ 0.77
SYNPO-203ENST00000518872 LRCOL1A6NCL2 159 aa19.86■□□□□ 0.77
SYNPO-203ENST00000518872 PSCAO43653 123 aa19.86■□□□□ 0.77
SYNPO-203ENST00000518872 IFNA1P01562 189 aa19.86■□□□□ 0.77
SYNPO-203ENST00000518872 IGLV2-8P01709 118 aa19.86■□□□□ 0.77
SYNPO-203ENST00000518872 RAB4BP61018 213 aa19.86■□□□□ 0.77
SYNPO-203ENST00000518872 CENPWQ5EE01 88 aa19.86■□□□□ 0.77
SYNPO-203ENST00000518872 MAPKAPK5-AS1Q8N8E1 139 aa19.86■□□□□ 0.77
SYNPO-203ENST00000518872 OR10G8Q8NGN5 311 aa19.86■□□□□ 0.77
SYNPO-203ENST00000518872 RPL36AP83881 106 aaKnown RBP19.85■□□□□ 0.77
SYNPO-203ENST00000518872 RPL36ALQ969Q0 106 aaKnown RBP19.85■□□□□ 0.77
SYNPO-203ENST00000518872 TRBV7-3A0A075B6L6 115 aa19.84■□□□□ 0.77
SYNPO-203ENST00000518872 UBE2D3P61077 147 aa19.84■□□□□ 0.77
SYNPO-203ENST00000518872 UBE2D2P62837 147 aa19.84■□□□□ 0.77
SYNPO-203ENST00000518872 Q9HAA7 133 aa19.84■□□□□ 0.77
SYNPO-203ENST00000518872 BCL2P10415 239 aa19.83■□□□□ 0.77
SYNPO-203ENST00000518872 TAGLN2P37802 199 aaKnown RBP19.83■□□□□ 0.77
SYNPO-203ENST00000518872 AKAP14Q86UN6 197 aa19.83■□□□□ 0.77
SYNPO-203ENST00000518872 Q8N1X5 172 aa19.83■□□□□ 0.77
SYNPO-203ENST00000518872 ABCA13Q86UQ4 5058 aa19.83■□□□□ 0.76
SYNPO-203ENST00000518872 C19orf71A6NCJ1 209 aa19.82■□□□□ 0.76
SYNPO-203ENST00000518872 TOR2AQ5JU69 321 aa19.82■□□□□ 0.76
SYNPO-203ENST00000518872 SPANXN1Q5VSR9 72 aa19.82■□□□□ 0.76
SYNPO-203ENST00000518872 Q8N3U1 123 aa19.82■□□□□ 0.76
SYNPO-203ENST00000518872 C9orf62Q8N4C0 152 aa19.82■□□□□ 0.76
SYNPO-203ENST00000518872 TM2D2Q9BX73 214 aa19.82■□□□□ 0.76
SYNPO-203ENST00000518872 TRAV8-3A0A0A6YYJ7 113 aa19.81■□□□□ 0.76
SYNPO-203ENST00000518872 FUSP35637 526 aaKnown RBP eCLIP19.81■□□□□ 0.76
SYNPO-203ENST00000518872 GNG4P50150 75 aa19.81■□□□□ 0.76
SYNPO-203ENST00000518872 NIT1Q86X76 327 aa19.81■□□□□ 0.76
SYNPO-203ENST00000518872 RPS20P60866 119 aaKnown RBP19.8■□□□□ 0.76
SYNPO-203ENST00000518872 NTN5Q8WTR8 489 aaPredicted RBP19.8■□□□□ 0.76
SYNPO-203ENST00000518872 CHCHD7Q9BUK0 85 aa19.8■□□□□ 0.76
SYNPO-203ENST00000518872 VAX2Q9UIW0 290 aa19.8■□□□□ 0.76
SYNPO-203ENST00000518872 IGLC6P0CF74 106 aa19.79■□□□□ 0.76
SYNPO-203ENST00000518872 ZNF56Q15929 161 aa19.79■□□□□ 0.76
SYNPO-203ENST00000518872 DAZ4Q86SG3 579 aaKnown RBP19.79■□□□□ 0.76
SYNPO-203ENST00000518872 DAZ3Q9NR90 486 aaKnown RBP19.79■□□□□ 0.76
SYNPO-203ENST00000518872 TRBV20OR9-2A0A075B6H5 130 aa19.78■□□□□ 0.76
SYNPO-203ENST00000518872 RAB19A4D1S5 217 aa19.78■□□□□ 0.76
SYNPO-203ENST00000518872 NEXN-AS1Q8NBZ9 246 aa19.78■□□□□ 0.76
SYNPO-203ENST00000518872 DAZAP1Q96EP5 407 aaKnown RBP19.78■□□□□ 0.76
SYNPO-203ENST00000518872 BIN3Q9NQY0 253 aa19.78■□□□□ 0.76
SYNPO-203ENST00000518872 MED9Q9NWA0 146 aa19.78■□□□□ 0.76
SYNPO-203ENST00000518872 KIF25-AS1Q9Y6Z4 181 aa19.78■□□□□ 0.76
SYNPO-203ENST00000518872 AP1S3Q96PC3 154 aa19.77■□□□□ 0.76
SYNPO-203ENST00000518872 OR2D3Q8NGH3 330 aa19.76■□□□□ 0.75
SYNPO-203ENST00000518872 URGCP-MRPS24S4R325 110 aa19.76■□□□□ 0.75
SYNPO-203ENST00000518872 MUC21A0A0G2JKD1 596 aa19.75■□□□□ 0.75
SYNPO-203ENST00000518872 MUC21A0A140T8X8 626 aa19.75■□□□□ 0.75
SYNPO-203ENST00000518872 KRTAP10-1P60331 282 aa19.75■□□□□ 0.75
SYNPO-203ENST00000518872 Q8N814 137 aa19.75■□□□□ 0.75
SYNPO-203ENST00000518872 FER1L6-AS1Q8NA97 138 aa19.75■□□□□ 0.75
SYNPO-203ENST00000518872 GCSHP23434 173 aa19.74■□□□□ 0.75
SYNPO-203ENST00000518872 COX11Q9Y6N1 276 aa19.74■□□□□ 0.75
SYNPO-203ENST00000518872 XKRY2A2RUG3 117 aa19.73■□□□□ 0.75
SYNPO-203ENST00000518872 TRBV6-8A0A0A6YYG3 113 aa19.72■□□□□ 0.75
SYNPO-203ENST00000518872 P01737 135 aa19.72■□□□□ 0.75
SYNPO-203ENST00000518872 SMIM17P0DL12 118 aa19.72■□□□□ 0.75
SYNPO-203ENST00000518872 GZMBP10144 247 aa19.72■□□□□ 0.75
SYNPO-203ENST00000518872 XGP55808 180 aa19.72■□□□□ 0.75
SYNPO-203ENST00000518872 CACNG7P62955 275 aa19.72■□□□□ 0.75
SYNPO-203ENST00000518872 F2Z2F3 143 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms