RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 VAX2Q9UIW0 290 aa9.02□□□□□ -0.97
VEGFA-219ENST00000518824 C19orf71A6NCJ1 209 aa9.01□□□□□ -0.97
VEGFA-219ENST00000518824 RBFOX3A6NFN3 312 aa9.01□□□□□ -0.97
VEGFA-219ENST00000518824 SNAI2O43623 268 aa9.01□□□□□ -0.97
VEGFA-219ENST00000518824 IFNA1P01562 189 aa9.01□□□□□ -0.97
VEGFA-219ENST00000518824 ZFP82Q8N141 532 aa9.01□□□□□ -0.97
VEGFA-219ENST00000518824 SSBP4Q9BWG4 385 aaPredicted RBP9.01□□□□□ -0.97
VEGFA-219ENST00000518824 PDE6DO43924 150 aa9□□□□□ -0.97
VEGFA-219ENST00000518824 CXCL1P09341 107 aa9□□□□□ -0.97
VEGFA-219ENST00000518824 DNAH10OSP0CZ25 163 aa9□□□□□ -0.97
VEGFA-219ENST00000518824 MED14OSP0DP75 135 aa9□□□□□ -0.97
VEGFA-219ENST00000518824 FUSP35637 526 aaKnown RBP eCLIP9□□□□□ -0.973e-8■□□□□ 10.5
VEGFA-219ENST00000518824 GNG4P50150 75 aa9□□□□□ -0.97
VEGFA-219ENST00000518824 ATP6V0E2Q8NHE4 81 aa9□□□□□ -0.97
VEGFA-219ENST00000518824 LYPD6BQ8NI32 183 aa9□□□□□ -0.97
VEGFA-219ENST00000518824 LY96Q9Y6Y9 160 aa9□□□□□ -0.97
VEGFA-219ENST00000518824 K7EN84 100 aa8.99□□□□□ -0.97
VEGFA-219ENST00000518824 TIRAPP58753 221 aa8.99□□□□□ -0.97
VEGFA-219ENST00000518824 GTSF1LQ9H1H1 148 aa8.99□□□□□ -0.97
VEGFA-219ENST00000518824 RHODO00212 210 aa8.98□□□□□ -0.97
VEGFA-219ENST00000518824 OR5AL1P0C617 328 aa8.98□□□□□ -0.97
VEGFA-219ENST00000518824 IGLC6P0CF74 106 aa8.98□□□□□ -0.97
VEGFA-219ENST00000518824 KRTAP10-2P60368 255 aa8.98□□□□□ -0.97
VEGFA-219ENST00000518824 BLOC1S1P78537 153 aa8.98□□□□□ -0.97
VEGFA-219ENST00000518824 SH2D6Q7Z4S9 175 aa8.98□□□□□ -0.97
VEGFA-219ENST00000518824 OR2D3Q8NGH3 330 aa8.98□□□□□ -0.97
VEGFA-219ENST00000518824 MSRB1Q9NZV6 116 aa8.98□□□□□ -0.97
VEGFA-219ENST00000518824 IGHV3-38A0A0C4DH36 116 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 IGHV3-30P01768 117 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 IGHV3-33P01772 117 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 IGHV3-30-3P0DP02 117 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 IGHV3-30-5P0DP03 117 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 OR10J3Q5JRS4 329 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 LELP1Q5T871 98 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 NUDT10Q8NFP7 164 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 OCC1Q8TAD7 63 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 NUDT11Q96G61 164 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 KIF25-AS1Q9Y6Z4 181 aa8.97□□□□□ -0.97
VEGFA-219ENST00000518824 EVI2AP22794 236 aa8.96□□□□□ -0.98
VEGFA-219ENST00000518824 TOR2AQ5JU69 321 aa8.96□□□□□ -0.98
VEGFA-219ENST00000518824 SPANXN1Q5VSR9 72 aa8.96□□□□□ -0.98
VEGFA-219ENST00000518824 SPATA12Q7Z6I5 190 aa8.96□□□□□ -0.98
VEGFA-219ENST00000518824 DAZAP1Q96EP5 407 aaKnown RBP8.96□□□□□ -0.98
VEGFA-219ENST00000518824 TPPP3Q9BW30 176 aa8.96□□□□□ -0.98
VEGFA-219ENST00000518824 RNASE7Q9H1E1 156 aaKnown RBP8.96□□□□□ -0.98
VEGFA-219ENST00000518824 TAGLN2P37802 199 aaKnown RBP8.95□□□□□ -0.98
VEGFA-219ENST00000518824 LINC01556Q5JQF7 62 aa8.95□□□□□ -0.98
VEGFA-219ENST00000518824 FER1L6-AS1Q8NA97 138 aa8.95□□□□□ -0.98
VEGFA-219ENST00000518824 SMIM12Q96EX1 92 aa8.95□□□□□ -0.98
VEGFA-219ENST00000518824 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
VEGFA-219ENST00000518824 KIAA1109Q2LD37 5005 aa8.94□□□□□ -0.98
VEGFA-219ENST00000518824 TRAV8-6A0A0B4J262 113 aa8.94□□□□□ -0.98
VEGFA-219ENST00000518824 P01737 135 aa8.94□□□□□ -0.98
VEGFA-219ENST00000518824 BTF3P20290 206 aaKnown RBP8.94□□□□□ -0.98
VEGFA-219ENST00000518824 CEBPGP53567 150 aa8.94□□□□□ -0.98
VEGFA-219ENST00000518824 ZNF56Q15929 161 aa8.94□□□□□ -0.98
VEGFA-219ENST00000518824 NEXN-AS1Q8NBZ9 246 aa8.94□□□□□ -0.98
VEGFA-219ENST00000518824 TRAV9-2A0A087WT02 112 aa8.93□□□□□ -0.98
VEGFA-219ENST00000518824 C16orf90A8MZG2 172 aa8.93□□□□□ -0.98
VEGFA-219ENST00000518824 RAB4BP61018 213 aa8.93□□□□□ -0.98
VEGFA-219ENST00000518824 UBE2D3P61077 147 aa8.93□□□□□ -0.98
VEGFA-219ENST00000518824 UBE2D2P62837 147 aa8.93□□□□□ -0.98
VEGFA-219ENST00000518824 LYZL1Q6UWQ5 148 aa8.93□□□□□ -0.98
VEGFA-219ENST00000518824 DNAJC30Q96LL9 226 aa8.93□□□□□ -0.98
VEGFA-219ENST00000518824 HERC2O95714 4834 aa8.92□□□□□ -0.98
VEGFA-219ENST00000518824 IBA57-AS1B1ANH7 110 aa8.92□□□□□ -0.98
VEGFA-219ENST00000518824 TMEM250H0YL14 139 aa8.92□□□□□ -0.98
VEGFA-219ENST00000518824 SRP19P09132 144 aaKnown RBP8.92□□□□□ -0.98
VEGFA-219ENST00000518824 RPS20P60866 119 aaKnown RBP8.92□□□□□ -0.98
VEGFA-219ENST00000518824 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
VEGFA-219ENST00000518824 FAM210AQ96ND0 272 aa8.92□□□□□ -0.98
VEGFA-219ENST00000518824 Q9HAA7 133 aa8.92□□□□□ -0.98
VEGFA-219ENST00000518824 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
VEGFA-219ENST00000518824 LRP1BQ9NZR2 4599 aa8.92□□□□□ -0.98
VEGFA-219ENST00000518824 TRBV7-3A0A075B6L6 115 aa8.91□□□□□ -0.98
VEGFA-219ENST00000518824 A0A087WTM6 91 aa8.91□□□□□ -0.98
VEGFA-219ENST00000518824 TRBV10-1A0A0K0K1A3 114 aa8.91□□□□□ -0.98
VEGFA-219ENST00000518824 C9JQL5 133 aa8.91□□□□□ -0.98
VEGFA-219ENST00000518824 F5H697 171 aa8.91□□□□□ -0.98
VEGFA-219ENST00000518824 RPL36AP83881 106 aaKnown RBP8.91□□□□□ -0.98
VEGFA-219ENST00000518824 SRSF3P84103 164 aaKnown RBP8.91□□□□□ -0.98
VEGFA-219ENST00000518824 OR10G8Q8NGN5 311 aa8.91□□□□□ -0.98
VEGFA-219ENST00000518824 GTSF1Q8WW33 167 aa8.91□□□□□ -0.98
VEGFA-219ENST00000518824 RPL36ALQ969Q0 106 aaKnown RBP8.91□□□□□ -0.98
VEGFA-219ENST00000518824 EIF5A2Q9GZV4 153 aaKnown RBP8.91□□□□□ -0.98
VEGFA-219ENST00000518824 RPP21Q9H633 154 aaKnown RBP8.91□□□□□ -0.98
VEGFA-219ENST00000518824 MGPP08493 103 aa8.9□□□□□ -0.98
VEGFA-219ENST00000518824 NTF3P20783 257 aa8.9□□□□□ -0.98
VEGFA-219ENST00000518824 CTRLP40313 264 aa8.9□□□□□ -0.98
VEGFA-219ENST00000518824 NFE4Q86UQ8 179 aa8.9□□□□□ -0.98
VEGFA-219ENST00000518824 C10orf126Q8N4M7 172 aa8.9□□□□□ -0.98
VEGFA-219ENST00000518824 AP1S3Q96PC3 154 aa8.9□□□□□ -0.98
VEGFA-219ENST00000518824 DNAH5Q8TE73 4624 aa8.9□□□□□ -0.98
VEGFA-219ENST00000518824 K7EP13 123 aa8.89□□□□□ -0.99
VEGFA-219ENST00000518824 SUMO4Q6EEV6 95 aa8.89□□□□□ -0.99
VEGFA-219ENST00000518824 TEX261Q6UWH6 196 aa8.89□□□□□ -0.99
VEGFA-219ENST00000518824 NTM-AS1Q6ZSK4 140 aa8.89□□□□□ -0.99
VEGFA-219ENST00000518824 NIT1Q86X76 327 aa8.89□□□□□ -0.99
VEGFA-219ENST00000518824 BIN3Q9NQY0 253 aa8.89□□□□□ -0.99
VEGFA-219ENST00000518824 XKRY2A2RUG3 117 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms