RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 PRB3Q04118 309 aaPredicted RBP9.64□□□□□ -0.87
SMAD1-215ENST00000515385 RHOHQ15669 191 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 PRR9Q5T870 116 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 Q9UFV3 132 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 ABCA1O95477 2261 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 CADP27708 2225 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 COL6A3P12111 3177 aa9.64□□□□□ -0.87
SMAD1-215ENST00000515385 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 OVOL1O14753 267 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 CRYGAP11844 174 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 CXCL5P42830 114 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 NDPQ00604 133 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 BSPH1Q075Z2 132 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 C16orf92Q96LL3 132 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 EDA2RQ9HAV5 297 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 KIF25-AS1Q9Y6Z4 181 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 ZFAND2AQ8N6M9 145 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
SMAD1-215ENST00000515385 U3KQE9 123 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
SMAD1-215ENST00000515385 IGHV3OR16-8A0A075B7F1 116 aa9.62□□□□□ -0.87
SMAD1-215ENST00000515385 ZNF22P17026 224 aaPredicted RBP9.62□□□□□ -0.87
SMAD1-215ENST00000515385 UBE2E1P51965 193 aa9.62□□□□□ -0.87
SMAD1-215ENST00000515385 LINC00315P59091 139 aa9.62□□□□□ -0.87
SMAD1-215ENST00000515385 RPL39P62891 51 aaKnown RBP9.62□□□□□ -0.87
SMAD1-215ENST00000515385 LY6G5BQ8NDX9 201 aa9.62□□□□□ -0.87
SMAD1-215ENST00000515385 ITLN2Q8WWU7 325 aaPredicted RBP9.62□□□□□ -0.87
SMAD1-215ENST00000515385 AHCTF1Q8WYP5 2266 aa9.62□□□□□ -0.87
SMAD1-215ENST00000515385 NSUN5P1Q3KNT7 163 aa9.62□□□□□ -0.87
SMAD1-215ENST00000515385 TRIOO75962 3097 aa9.62□□□□□ -0.87
SMAD1-215ENST00000515385 IGHV3-35A0A0C4DH35 117 aa9.61□□□□□ -0.87
SMAD1-215ENST00000515385 C15orf32Q32M92 178 aa9.61□□□□□ -0.87
SMAD1-215ENST00000515385 APRG1Q8IVJ8 170 aa9.61□□□□□ -0.87
SMAD1-215ENST00000515385 Q8N6K4 173 aa9.61□□□□□ -0.87
SMAD1-215ENST00000515385 IGHV3-66A0A0C4DH42 116 aa9.6□□□□□ -0.87
SMAD1-215ENST00000515385 RNASE3P12724 160 aaKnown RBP9.6□□□□□ -0.87
SMAD1-215ENST00000515385 SUMO4Q6EEV6 95 aa9.6□□□□□ -0.87
SMAD1-215ENST00000515385 GAGE2AQ6NT46 116 aa9.6□□□□□ -0.87
SMAD1-215ENST00000515385 NBEAQ8NFP9 2946 aa9.6□□□□□ -0.87
SMAD1-215ENST00000515385 ODF3BA8MYP8 253 aa9.6□□□□□ -0.87
SMAD1-215ENST00000515385 LITAFQ99732 161 aa9.6□□□□□ -0.87
SMAD1-215ENST00000515385 COX7CP15954 63 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 MIAQ16674 131 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 EEF1AKMT3Q96AZ1 226 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 TRBV7-1A0A0A6YYK4 115 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 IGHV7-81A0A0B4J1V7 117 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 M0R1W7 72 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 TMEM258P61165 79 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 SDIM1Q6ZPB5 146 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 FAM19A4Q96LR4 140 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 PRO0628Q9UI54 55 aa9.59□□□□□ -0.87
SMAD1-215ENST00000515385 MALP21145 153 aa9.58□□□□□ -0.88
SMAD1-215ENST00000515385 I3L3M4 83 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 CDX4O14627 284 aaPredicted RBP9.57□□□□□ -0.88
SMAD1-215ENST00000515385 PRSS2P07478 247 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
SMAD1-215ENST00000515385 C5orf38Q86SI9 138 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 DCANP1Q8TF63 244 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 TIMM21Q9BVV7 248 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 GNRH2O43555 120 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 TIMM17BO60830 172 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 IGF1P05019 195 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 IGHV3-30-3P0DP02 117 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 CLEC2BQ92478 149 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 LINC00527Q9UJ94 153 aa9.57□□□□□ -0.88
SMAD1-215ENST00000515385 SPRY2O43597 315 aa9.56□□□□□ -0.88
SMAD1-215ENST00000515385 CLEC19AQ6UXS0 136 aa9.56□□□□□ -0.88
SMAD1-215ENST00000515385 C20orf173Q96LM9 149 aa9.56□□□□□ -0.88
SMAD1-215ENST00000515385 IGHV3OR16-13A0A075B7E8 117 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 IGHV3-74A0A0B4J1X5 117 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 E7EQL1 145 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 F5H697 171 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 ATOX1O00244 68 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 LPAL2Q16609 132 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 Q5XG85 94 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
SMAD1-215ENST00000515385 CCDC140Q96MF4 163 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 FRYLO94915 3013 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 CUL9Q8IWT3 2517 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 TRAV8-3A0A0A6YYJ7 113 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 J3QLI3 93 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 MINOS1Q5TGZ0 78 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 ARRDC1-AS1Q9H2J1 176 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 MINOS1-NBL1R4GNA1 71 aa9.55□□□□□ -0.88
SMAD1-215ENST00000515385 IGHV3-64A0A075B6Q5 118 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 IGHV1-58A0A0C4DH39 117 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 A0A0J9YXV3 536 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 K7ENP7 123 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 ICE1Q9Y2F5 2266 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 TRACP01848 142 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 VMO1Q7Z5L0 202 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 DAND5Q8N907 189 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 Q8N9W7 124 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 NDUFA12Q9UI09 145 aa9.54□□□□□ -0.88
SMAD1-215ENST00000515385 PYGO1Q9Y3Y4 419 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms