RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 A0A087WWL8 130 aa16.53■□□□□ 0.24
SNF8-213ENST00000514929 SULT1A2P50226 295 aa16.53■□□□□ 0.24
SNF8-213ENST00000514929 RPL19P84098 196 aaKnown RBP16.53■□□□□ 0.24
SNF8-213ENST00000514929 KRTAP17-1Q9BYP8 105 aa16.53■□□□□ 0.24
SNF8-213ENST00000514929 C1QBP02746 253 aa16.52■□□□□ 0.24
SNF8-213ENST00000514929 RPL35P42766 123 aaKnown RBP16.52■□□□□ 0.24
SNF8-213ENST00000514929 Q6ZNX1 250 aa16.52■□□□□ 0.24
SNF8-213ENST00000514929 Q9UF83 564 aa16.52■□□□□ 0.24
SNF8-213ENST00000514929 RYR1P21817 5038 aa16.52■□□□□ 0.23
SNF8-213ENST00000514929 A0A087WTM6 91 aa16.51■□□□□ 0.23
SNF8-213ENST00000514929 IGHV3-30P01768 117 aa16.51■□□□□ 0.23
SNF8-213ENST00000514929 IGHV3-33P01772 117 aa16.51■□□□□ 0.23
SNF8-213ENST00000514929 LINC00694P0DN24 101 aa16.51■□□□□ 0.23
SNF8-213ENST00000514929 IGHV3-30-3P0DP02 117 aa16.51■□□□□ 0.23
SNF8-213ENST00000514929 IGHV3-30-5P0DP03 117 aa16.51■□□□□ 0.23
SNF8-213ENST00000514929 SLC51BQ86UW2 128 aa16.51■□□□□ 0.23
SNF8-213ENST00000514929 LRP1BQ9NZR2 4599 aa16.5■□□□□ 0.23
SNF8-213ENST00000514929 IBA57-AS1B1ANH7 110 aa16.5■□□□□ 0.23
SNF8-213ENST00000514929 CXCL1P09341 107 aa16.5■□□□□ 0.23
SNF8-213ENST00000514929 C11orf52Q96A22 123 aa16.5■□□□□ 0.23
SNF8-213ENST00000514929 DERL1Q9BUN8 251 aa16.5■□□□□ 0.23
SNF8-213ENST00000514929 PGPEP1Q9NXJ5 209 aa16.5■□□□□ 0.23
SNF8-213ENST00000514929 PCLOQ9Y6V0 5065 aa16.49■□□□□ 0.23
SNF8-213ENST00000514929 PSCAO43653 123 aa16.48■□□□□ 0.23
SNF8-213ENST00000514929 Q9HAA7 133 aa16.48■□□□□ 0.23
SNF8-213ENST00000514929 A0A087WWC5 75 aa16.47■□□□□ 0.23
SNF8-213ENST00000514929 IFNA1P01562 189 aa16.47■□□□□ 0.23
SNF8-213ENST00000514929 FUSP35637 526 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNF8-213ENST00000514929 OR10AG1Q8NH19 301 aa16.47■□□□□ 0.23
SNF8-213ENST00000514929 CENPWQ5EE01 88 aa16.46■□□□□ 0.23
SNF8-213ENST00000514929 AKAP14Q86UN6 197 aa16.46■□□□□ 0.23
SNF8-213ENST00000514929 hCG_2014768A0A024R1R8 64 aa16.45■□□□□ 0.22
SNF8-213ENST00000514929 MEF2BQ02080 365 aaPredicted RBP16.45■□□□□ 0.22
SNF8-213ENST00000514929 CDPF1Q6NVV7 123 aa16.45■□□□□ 0.22
SNF8-213ENST00000514929 HSPG2P98160 4391 aa16.44■□□□□ 0.22
SNF8-213ENST00000514929 TRBV10-1A0A0K0K1A3 114 aa16.44■□□□□ 0.22
SNF8-213ENST00000514929 SNAI2O43623 268 aa16.44■□□□□ 0.22
SNF8-213ENST00000514929 PDE6DO43924 150 aa16.44■□□□□ 0.22
SNF8-213ENST00000514929 SPANXN1Q5VSR9 72 aa16.44■□□□□ 0.22
SNF8-213ENST00000514929 MAPKAPK5-AS1Q8N8E1 139 aa16.44■□□□□ 0.22
SNF8-213ENST00000514929 SSBP4Q9BWG4 385 aaPredicted RBP16.44■□□□□ 0.22
SNF8-213ENST00000514929 MUC21A0A0G2JKD1 596 aa16.43■□□□□ 0.22
SNF8-213ENST00000514929 MUC21A0A140T8X8 626 aa16.43■□□□□ 0.22
SNF8-213ENST00000514929 OR5AL1P0C617 328 aa16.43■□□□□ 0.22
SNF8-213ENST00000514929 RPL36AP83881 106 aaKnown RBP16.43■□□□□ 0.22
SNF8-213ENST00000514929 Q8N3U1 123 aa16.43■□□□□ 0.22
SNF8-213ENST00000514929 RPL36ALQ969Q0 106 aaKnown RBP16.43■□□□□ 0.22
SNF8-213ENST00000514929 DAZAP1Q96EP5 407 aaKnown RBP16.43■□□□□ 0.22
SNF8-213ENST00000514929 RAB19A4D1S5 217 aa16.42■□□□□ 0.22
SNF8-213ENST00000514929 BCL2P10415 239 aa16.42■□□□□ 0.22
SNF8-213ENST00000514929 GNG4P50150 75 aa16.42■□□□□ 0.22
SNF8-213ENST00000514929 SSTP61278 116 aa16.42■□□□□ 0.22
SNF8-213ENST00000514929 LAGE3Q14657 143 aa16.42■□□□□ 0.22
SNF8-213ENST00000514929 ZNF56Q15929 161 aa16.42■□□□□ 0.22
SNF8-213ENST00000514929 MED9Q9NWA0 146 aa16.42■□□□□ 0.22
SNF8-213ENST00000514929 RAB4BP61018 213 aa16.41■□□□□ 0.22
SNF8-213ENST00000514929 DNAH5Q8TE73 4624 aa16.41■□□□□ 0.22
SNF8-213ENST00000514929 TRBV7-3A0A075B6L6 115 aa16.4■□□□□ 0.22
SNF8-213ENST00000514929 IGLV2-8P01709 118 aa16.4■□□□□ 0.22
SNF8-213ENST00000514929 C9orf62Q8N4C0 152 aa16.4■□□□□ 0.22
SNF8-213ENST00000514929 SMIM12Q96EX1 92 aa16.4■□□□□ 0.22
SNF8-213ENST00000514929 VAX2Q9UIW0 290 aa16.4■□□□□ 0.22
SNF8-213ENST00000514929 URGCP-MRPS24S4R325 110 aa16.4■□□□□ 0.22
SNF8-213ENST00000514929 DAZ4Q86SG3 579 aaKnown RBP16.39■□□□□ 0.21
SNF8-213ENST00000514929 OR2D3Q8NGH3 330 aa16.39■□□□□ 0.21
SNF8-213ENST00000514929 DAZ3Q9NR90 486 aaKnown RBP16.39■□□□□ 0.21
SNF8-213ENST00000514929 RPS20P60866 119 aaKnown RBP16.38■□□□□ 0.21
SNF8-213ENST00000514929 UBE2D3P61077 147 aa16.38■□□□□ 0.21
SNF8-213ENST00000514929 UBE2D2P62837 147 aa16.38■□□□□ 0.21
SNF8-213ENST00000514929 TPPP3Q9BW30 176 aa16.38■□□□□ 0.21
SNF8-213ENST00000514929 TM2D2Q9BX73 214 aa16.38■□□□□ 0.21
SNF8-213ENST00000514929 KRTAP4-5Q9BYR2 181 aa16.38■□□□□ 0.21
SNF8-213ENST00000514929 APOBP04114 4563 aaKnown RBP16.37■□□□□ 0.21
SNF8-213ENST00000514929 LRCOL1A6NCL2 159 aa16.37■□□□□ 0.21
SNF8-213ENST00000514929 F5H697 171 aa16.37■□□□□ 0.21
SNF8-213ENST00000514929 SMIM17P0DL12 118 aa16.37■□□□□ 0.21
SNF8-213ENST00000514929 GZMBP10144 247 aa16.37■□□□□ 0.21
SNF8-213ENST00000514929 TAGLN2P37802 199 aaKnown RBP16.37■□□□□ 0.21
SNF8-213ENST00000514929 TOR2AQ5JU69 321 aa16.37■□□□□ 0.21
SNF8-213ENST00000514929 AP1S3Q96PC3 154 aa16.37■□□□□ 0.21
SNF8-213ENST00000514929 TRAV8-3A0A0A6YYJ7 113 aa16.36■□□□□ 0.21
SNF8-213ENST00000514929 C19orf71A6NCJ1 209 aa16.36■□□□□ 0.21
SNF8-213ENST00000514929 FER1L6-AS1Q8NA97 138 aa16.36■□□□□ 0.21
SNF8-213ENST00000514929 OR10G8Q8NGN5 311 aa16.36■□□□□ 0.21
SNF8-213ENST00000514929 P01737 135 aa16.35■□□□□ 0.21
SNF8-213ENST00000514929 NIT1Q86X76 327 aa16.35■□□□□ 0.21
SNF8-213ENST00000514929 NEXN-AS1Q8NBZ9 246 aa16.35■□□□□ 0.21
SNF8-213ENST00000514929 BIN3Q9NQY0 253 aa16.35■□□□□ 0.21
SNF8-213ENST00000514929 TRBV20OR9-2A0A075B6H5 130 aa16.34■□□□□ 0.21
SNF8-213ENST00000514929 XKRY2A2RUG3 117 aa16.34■□□□□ 0.21
SNF8-213ENST00000514929 RBFOX3A6NFN3 312 aa16.34■□□□□ 0.21
SNF8-213ENST00000514929 IGLC6P0CF74 106 aa16.34■□□□□ 0.21
SNF8-213ENST00000514929 A0A087WX48 190 aa16.33■□□□□ 0.2
SNF8-213ENST00000514929 KCNIP4Q6PIL6 250 aa16.33■□□□□ 0.2
SNF8-213ENST00000514929 ALKAL2Q6UX46 152 aa16.33■□□□□ 0.2
SNF8-213ENST00000514929 Q8N1X5 172 aa16.33■□□□□ 0.2
SNF8-213ENST00000514929 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.33■□□□□ 0.2
SNF8-213ENST00000514929 GCSHP23434 173 aa16.32■□□□□ 0.2
SNF8-213ENST00000514929 KIF25-AS1Q9Y6Z4 181 aa16.32■□□□□ 0.2
SNF8-213ENST00000514929 IGLV5-52A0A0A0MRZ9 124 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms