RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 RBAKDNA6NC62 111 aa0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 TFF1P04155 84 aa0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 IGLC6P0CF74 106 aa0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 LZICQ8WZA0 190 aa0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 IFI27L1Q96BM0 104 aa0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 AKAP6Q13023 2319 aa0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 RBBP6Q7Z6E9 1792 aaKnown RBP0.16□□□□□ -2.38
TRAPPC11-210ENST00000513600 OTOGQ6ZRI0 2925 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 FAM208BQ5VWN6 2430 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 UNC79Q9P2D8 2635 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 LOC105371267A0A1B0GV96 52 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 J3QR89 54 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 M0R2Z0 102 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 SSBP1Q04837 148 aaKnown RBP0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 LINC01545Q5VT33 79 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 CYP2G1PQ6ZSU1 146 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 VMO1Q7Z5L0 202 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 VSTM2AQ8TAG5 236 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 MAFIPQ8WZ33 124 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 SMIM3Q9BZL3 60 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 NDUFA12Q9UI09 145 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 PLXNA1Q9UIW2 1896 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 PLCE1Q9P212 2302 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 PTPRMP28827 1452 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 ERCC6Q03468 1493 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 KIF13AQ9H1H9 1805 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 SYNJ1O43426 1573 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 MYH6P13533 1939 aa0.15□□□□□ -2.39
TRAPPC11-210ENST00000513600 PRG4Q92954 1404 aaPredicted RBP0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 NCOR1O75376 2440 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 HIVEP3Q5T1R4 2406 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 ABCA2Q9BZC7 2435 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 FAM236AA0A1B0GUQ0 79 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 FAM236BA0A1B0GV22 79 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 F2Z2F3 143 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 LINC00694P0DN24 101 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 CCL3L1P16619 93 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 NPC2P61916 151 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 SPCS2Q15005 226 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 SPANXN1Q5VSR9 72 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 SCIMPQ6UWF3 145 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 CTAGE3PQ8IX95 158 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 PRR15LQ9BU68 103 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 BPESC1Q9GZL8 116 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 PROK2Q9HC23 129 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 COPZ2Q9P299 210 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 PTPRQQ9UMZ3 2332 aa0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 ZNF142P52746 1687 aaPredicted RBP0.14□□□□□ -2.39
TRAPPC11-210ENST00000513600 MACF1Q9UPN3 7388 aaKnown RBP0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 SPTBN1Q01082 2364 aaKnown RBP0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 CDK13Q14004 1512 aaKnown RBP0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 AKAP11Q9UKA4 1901 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 A0A087WTM6 91 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 TRAV12-3A0A0B4J271 114 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 PITX3O75364 302 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 COX4I1P13073 169 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 SMIM21Q3B7S5 101 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 FAM74A4Q5TZK3 123 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 MIC13Q5XKP0 118 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 SLC48A1Q6P1K1 146 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 C4orf33Q8N1A6 199 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 ANP32BQ92688 251 aaKnown RBP0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 TMEM2Q9UHN6 1383 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 CELSR2Q9HCU4 2923 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 GOLGA4Q13439 2230 aaKnown RBP0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 PI4KAP42356 2102 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 VIRMAQ69YN4 1812 aaKnown RBP0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 CEP152O94986 1710 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 KDM6BO15054 1643 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 FHAD1B1AJZ9 1412 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 ANK2Q01484 3957 aa0.13□□□□□ -2.39
TRAPPC11-210ENST00000513600 SYNE1Q8NF91 8797 aaKnown RBP0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 ADGRB1O14514 1584 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 GVQW2A0A096LPI5 108 aaPredicted RBP0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 TRBV7-1A0A0A6YYK4 115 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 K7ERU9 68 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 M0R129 80 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 NPFFO15130 113 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 PIRTP0C851 137 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 SMCO1Q147U7 214 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 C9orf116Q5BN46 136 aaPredicted RBP0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 Q6ZUT4 128 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 C20orf197Q8N268 126 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 TSTD1Q8NFU3 115 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 SMIM11BQ8TCY0 68 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 COX7B2Q8TF08 81 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 PSMG3Q9BT73 122 aaPredicted RBP0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 RPRMQ9NS64 109 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 TMEM242Q9NWH2 141 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 PAIP2BQ9ULR5 123 aaKnown RBP0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 PKDREJQ9NTG1 2253 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 DOPEY2Q9Y3R5 2298 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 SOGA1O94964 1423 aa0.12□□□□□ -2.39
TRAPPC11-210ENST00000513600 PTPN13Q12923 2485 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 PHIPQ8WWQ0 1821 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 IFNA17P01571 189 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 APODP05090 189 aa0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 GUCA1AP43080 201 aaPredicted RBP0.11□□□□□ -2.39
TRAPPC11-210ENST00000513600 RRAS2P62070 204 aaPredicted RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms