RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 GAGE4Q13068 117 aa10.89□□□□□ -0.67
DDX41-214ENST00000512334 GAGE5Q13069 117 aa10.89□□□□□ -0.67
DDX41-214ENST00000512334 GAGE13Q4V321 117 aa10.89□□□□□ -0.67
DDX41-214ENST00000512334 SPANXN1Q5VSR9 72 aa10.89□□□□□ -0.67
DDX41-214ENST00000512334 TPPP3Q9BW30 176 aa10.89□□□□□ -0.67
DDX41-214ENST00000512334 EIF5A2Q9GZV4 153 aaKnown RBP10.89□□□□□ -0.67
DDX41-214ENST00000512334 C19orf71A6NCJ1 209 aa10.88□□□□□ -0.67
DDX41-214ENST00000512334 SNAI2O43623 268 aa10.88□□□□□ -0.67
DDX41-214ENST00000512334 OR5AL1P0C617 328 aa10.88□□□□□ -0.67
DDX41-214ENST00000512334 RPS20P60866 119 aaKnown RBP10.88□□□□□ -0.67
DDX41-214ENST00000512334 WFDC10BQ8IUB3 73 aa10.88□□□□□ -0.67
DDX41-214ENST00000512334 C14orf178Q8N769 122 aaPredicted RBP10.88□□□□□ -0.67
DDX41-214ENST00000512334 ATP6V0E2Q8NHE4 81 aa10.88□□□□□ -0.67
DDX41-214ENST00000512334 XKRY2A2RUG3 117 aa10.87□□□□□ -0.67
DDX41-214ENST00000512334 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
DDX41-214ENST00000512334 CRYGDP07320 174 aa10.87□□□□□ -0.67
DDX41-214ENST00000512334 FER1L6-AS1Q8NA97 138 aa10.87□□□□□ -0.67
DDX41-214ENST00000512334 SSBP4Q9BWG4 385 aaPredicted RBP10.87□□□□□ -0.67
DDX41-214ENST00000512334 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
DDX41-214ENST00000512334 FAT2Q9NYQ8 4349 aa10.87□□□□□ -0.67
DDX41-214ENST00000512334 DNAH17Q9UFH2 4485 aa10.86□□□□□ -0.67
DDX41-214ENST00000512334 TIRAPP58753 221 aa10.86□□□□□ -0.67
DDX41-214ENST00000512334 OR10J3Q5JRS4 329 aa10.86□□□□□ -0.67
DDX41-214ENST00000512334 FAM210AQ96ND0 272 aa10.86□□□□□ -0.67
DDX41-214ENST00000512334 TRAV9-2A0A087WT02 112 aa10.85□□□□□ -0.67
DDX41-214ENST00000512334 ZNF56Q15929 161 aa10.85□□□□□ -0.67
DDX41-214ENST00000512334 NUDT10Q8NFP7 164 aa10.85□□□□□ -0.67
DDX41-214ENST00000512334 OCC1Q8TAD7 63 aa10.85□□□□□ -0.67
DDX41-214ENST00000512334 NUDT11Q96G61 164 aa10.85□□□□□ -0.67
DDX41-214ENST00000512334 GTSF1LQ9H1H1 148 aa10.85□□□□□ -0.67
DDX41-214ENST00000512334 Q9UF83 564 aa10.85□□□□□ -0.67
DDX41-214ENST00000512334 TRAV8-6A0A0B4J262 113 aa10.84□□□□□ -0.67
DDX41-214ENST00000512334 A0A1B0GVY2 172 aa10.84□□□□□ -0.67
DDX41-214ENST00000512334 K7EN84 100 aa10.84□□□□□ -0.67
DDX41-214ENST00000512334 SMIM17P0DL12 118 aa10.84□□□□□ -0.67
DDX41-214ENST00000512334 EVI2AP22794 236 aa10.84□□□□□ -0.67
DDX41-214ENST00000512334 LINC00315P59091 139 aa10.84□□□□□ -0.67
DDX41-214ENST00000512334 TNP2Q05952 138 aa10.84□□□□□ -0.67
DDX41-214ENST00000512334 TEX261Q6UWH6 196 aa10.84□□□□□ -0.67
DDX41-214ENST00000512334 RNASE7Q9H1E1 156 aaKnown RBP10.84□□□□□ -0.67
DDX41-214ENST00000512334 IGLC6P0CF74 106 aa10.83□□□□□ -0.68
DDX41-214ENST00000512334 DNAH10OSP0CZ25 163 aa10.83□□□□□ -0.68
DDX41-214ENST00000512334 LELP1Q5T871 98 aa10.83□□□□□ -0.68
DDX41-214ENST00000512334 AP1S3Q96PC3 154 aa10.83□□□□□ -0.68
DDX41-214ENST00000512334 RPP21Q9H633 154 aaKnown RBP10.83□□□□□ -0.68
DDX41-214ENST00000512334 IGHV3-38A0A0C4DH36 116 aa10.82□□□□□ -0.68
DDX41-214ENST00000512334 F5H697 171 aa10.82□□□□□ -0.68
DDX41-214ENST00000512334 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
DDX41-214ENST00000512334 BTF3P20290 206 aaKnown RBP10.82□□□□□ -0.68
DDX41-214ENST00000512334 RAB4BP61018 213 aa10.82□□□□□ -0.68
DDX41-214ENST00000512334 CACNG7P62955 275 aa10.82□□□□□ -0.68
DDX41-214ENST00000512334 SMIM7Q9BQ49 75 aa10.82□□□□□ -0.68
DDX41-214ENST00000512334 TRBV10-1A0A0K0K1A3 114 aa10.81□□□□□ -0.68
DDX41-214ENST00000512334 F2Z2F3 143 aa10.81□□□□□ -0.68
DDX41-214ENST00000512334 RPL36AP83881 106 aaKnown RBP10.81□□□□□ -0.68
DDX41-214ENST00000512334 LYZL1Q6UWQ5 148 aa10.81□□□□□ -0.68
DDX41-214ENST00000512334 RPL36ALQ969Q0 106 aaKnown RBP10.81□□□□□ -0.68
DDX41-214ENST00000512334 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
DDX41-214ENST00000512334 SRP19P09132 144 aaKnown RBP10.8□□□□□ -0.68
DDX41-214ENST00000512334 C10orf126Q8N4M7 172 aa10.8□□□□□ -0.68
DDX41-214ENST00000512334 MSRB1Q9NZV6 116 aa10.8□□□□□ -0.68
DDX41-214ENST00000512334 TNFRSF18Q9Y5U5 241 aa10.8□□□□□ -0.68
DDX41-214ENST00000512334 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
DDX41-214ENST00000512334 K7EP13 123 aa10.79□□□□□ -0.68
DDX41-214ENST00000512334 GATCO43716 136 aaKnown RBP10.79□□□□□ -0.68
DDX41-214ENST00000512334 NDUFS6O75380 124 aaKnown RBP10.79□□□□□ -0.68
DDX41-214ENST00000512334 IGHV3-30P01768 117 aa10.79□□□□□ -0.68
DDX41-214ENST00000512334 IGHV3-33P01772 117 aa10.79□□□□□ -0.68
DDX41-214ENST00000512334 MGPP08493 103 aa10.79□□□□□ -0.68
DDX41-214ENST00000512334 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
DDX41-214ENST00000512334 IGHV3-30-5P0DP03 117 aa10.79□□□□□ -0.68
DDX41-214ENST00000512334 LINC01556Q5JQF7 62 aa10.79□□□□□ -0.68
DDX41-214ENST00000512334 TRBV7-3A0A075B6L6 115 aa10.78□□□□□ -0.68
DDX41-214ENST00000512334 A0A087WWC5 75 aa10.78□□□□□ -0.68
DDX41-214ENST00000512334 ERVFC1-1P60608 527 aa10.78□□□□□ -0.68
DDX41-214ENST00000512334 NFE4Q86UQ8 179 aa10.78□□□□□ -0.68
DDX41-214ENST00000512334 KIF25-AS1Q9Y6Z4 181 aa10.78□□□□□ -0.68
DDX41-214ENST00000512334 TRGC1P0CF51 173 aa10.77□□□□□ -0.69
DDX41-214ENST00000512334 NTF3P20783 257 aa10.77□□□□□ -0.69
DDX41-214ENST00000512334 CTRLP40313 264 aa10.77□□□□□ -0.69
DDX41-214ENST00000512334 FAM231DQ6ZW35 169 aa10.77□□□□□ -0.69
DDX41-214ENST00000512334 LINC01551Q86U37 167 aa10.77□□□□□ -0.69
DDX41-214ENST00000512334 NEXN-AS1Q8NBZ9 246 aa10.77□□□□□ -0.69
DDX41-214ENST00000512334 UBE2D3P61077 147 aa10.76□□□□□ -0.69
DDX41-214ENST00000512334 UBE2D2P62837 147 aa10.76□□□□□ -0.69
DDX41-214ENST00000512334 PEA15Q15121 130 aa10.76□□□□□ -0.69
DDX41-214ENST00000512334 TWIST1Q15672 202 aa10.76□□□□□ -0.69
DDX41-214ENST00000512334 OR10G8Q8NGN5 311 aa10.76□□□□□ -0.69
DDX41-214ENST00000512334 PKD1P98161 4303 aa10.75□□□□□ -0.69
DDX41-214ENST00000512334 A8MWL6 223 aa10.75□□□□□ -0.69
DDX41-214ENST00000512334 Q6ZRN7 208 aaPredicted RBP10.75□□□□□ -0.69
DDX41-214ENST00000512334 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.75□□□□□ -0.69
DDX41-214ENST00000512334 C9JQL5 133 aa10.74□□□□□ -0.69
DDX41-214ENST00000512334 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
DDX41-214ENST00000512334 WDR73Q6P4I2 378 aa10.74□□□□□ -0.69
DDX41-214ENST00000512334 Q8N3U1 123 aa10.74□□□□□ -0.69
DDX41-214ENST00000512334 GTSF1Q8WW33 167 aa10.74□□□□□ -0.69
DDX41-214ENST00000512334 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
DDX41-214ENST00000512334 Q9HAA7 133 aa10.74□□□□□ -0.69
DDX41-214ENST00000512334 URGCP-MRPS24S4R325 110 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms