RNA–Protein interactions for RNA: ENST00000510241.5

APBB3-215, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-215	ENST00000510241	DPH3P1	Q9H4G8	78 aa		12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	TRAV12-1	A0A0B4J245	112 aa		12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	ASIP	P42127	132 aa		12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	SRSF2	Q01130	221 aa	Known RBP	12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	C9orf47	Q6ZRZ4	202 aa		12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	MYO9A	B2RTY4	2548 aa		12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	TRAV12-2	A0A075B6T6	113 aa		12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	IGHV4-39	P01824	125 aa		12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	FAM110D	Q8TAY7	271 aa	Predicted RBP	12.06	□□□□□ -0.48
APBB3-215	ENST00000510241	SCGB2A1	O75556	95 aa		12.05	□□□□□ -0.48
APBB3-215	ENST00000510241	AJUBA	Q96IF1	538 aa		12.05	□□□□□ -0.48
APBB3-215	ENST00000510241	TLN2	Q9Y4G6	2542 aa		12.04	□□□□□ -0.48
APBB3-215	ENST00000510241	RBAKDN	A6NC62	111 aa		12.04	□□□□□ -0.48
APBB3-215	ENST00000510241	CRLF1	O75462	422 aa		12.04	□□□□□ -0.48
APBB3-215	ENST00000510241	HTN1	P15515	57 aa		12.04	□□□□□ -0.48
APBB3-215	ENST00000510241	TRAV12-3	A0A0B4J271	114 aa		12.04	□□□□□ -0.48
APBB3-215	ENST00000510241		A4D1N5	150 aa		12.04	□□□□□ -0.48
APBB3-215	ENST00000510241	PRM2	P04554	102 aa		12.04	□□□□□ -0.48
APBB3-215	ENST00000510241	OR10J6P	Q8NGY7	276 aa		12.03	□□□□□ -0.48
APBB3-215	ENST00000510241	EEF1AKMT3	Q96AZ1	226 aa		12.03	□□□□□ -0.48
APBB3-215	ENST00000510241	NIPBL	Q6KC79	2804 aa	eCLIP	12.03	□□□□□ -0.48
APBB3-215	ENST00000510241	UBE2D3	P61077	147 aa		12.03	□□□□□ -0.48
APBB3-215	ENST00000510241	UBE2D2	P62837	147 aa		12.03	□□□□□ -0.48
APBB3-215	ENST00000510241	IGF2-AS	Q6U949	168 aa		12.03	□□□□□ -0.48
APBB3-215	ENST00000510241	IGHV3-73	A0A0B4J1V6	119 aa		12.02	□□□□□ -0.48
APBB3-215	ENST00000510241		A8MZ25	164 aa		12.02	□□□□□ -0.48
APBB3-215	ENST00000510241		B5MCH6	92 aa		12.02	□□□□□ -0.48
APBB3-215	ENST00000510241	IGHV3-30	P01768	117 aa		12.02	□□□□□ -0.48
APBB3-215	ENST00000510241	IGHV3-30-5	P0DP03	117 aa		12.02	□□□□□ -0.48
APBB3-215	ENST00000510241	USP9X	Q93008	2570 aa	Predicted RBP	12.02	□□□□□ -0.48
APBB3-215	ENST00000510241	FLNC	Q14315	2725 aa		12.02	□□□□□ -0.48
APBB3-215	ENST00000510241	WNK1	Q9H4A3	2382 aa		12.02	□□□□□ -0.49
APBB3-215	ENST00000510241		M0R1W7	72 aa		12.02	□□□□□ -0.49
APBB3-215	ENST00000510241		Q1RN00	199 aa		12.02	□□□□□ -0.49
APBB3-215	ENST00000510241	SUMO4	Q6EEV6	95 aa		12.02	□□□□□ -0.49
APBB3-215	ENST00000510241	TEN1	Q86WV5	123 aa		12.02	□□□□□ -0.49
APBB3-215	ENST00000510241	FBN2	P35556	2912 aa		12.02	□□□□□ -0.49
APBB3-215	ENST00000510241	PRRC2A	P48634	2157 aa	Known RBP	12.02	□□□□□ -0.49
APBB3-215	ENST00000510241	TMEM238L	A0A1B0GVL6	79 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241		A6NJY4	79 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241		A8MWV9	139 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	C3orf56	Q8N813	242 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	IGHV4-4	A0A075B6R2	117 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	TRAV21	A0A0B4J279	112 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	TCTEX1D4	Q5JR98	221 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	ANAPC13	Q9BS18	74 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	SDHAF1	A6NFY7	115 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	PSMG4	Q5JS54	123 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	PPDPFL	Q8WWR9	84 aa		12.01	□□□□□ -0.49
APBB3-215	ENST00000510241	TRAV4	A0A0B4J268	109 aa		12	□□□□□ -0.49
APBB3-215	ENST00000510241	TEX49	A0A1B0GTD5	131 aa		12	□□□□□ -0.49
APBB3-215	ENST00000510241	IGIP	A6NJ69	53 aa		12	□□□□□ -0.49
APBB3-215	ENST00000510241	MDFIC	Q9P1T7	246 aa		12	□□□□□ -0.49
APBB3-215	ENST00000510241	KLK9	Q9UKQ9	250 aa		12	□□□□□ -0.49
APBB3-215	ENST00000510241	PTPN13	Q12923	2485 aa		11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	LINC00315	P59091	139 aa		11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	TCF15	Q12870	199 aa		11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	NTN5	Q8WTR8	489 aa	Predicted RBP	11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.99	□□□□□ -0.49
APBB3-215	ENST00000510241		J3QQQ9	107 aa		11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	PRSS2	P07478	247 aa		11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	MUSTN1	Q8IVN3	82 aa		11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	C10orf126	Q8N4M7	172 aa		11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	SIRPD	Q9H106	197 aa		11.99	□□□□□ -0.49
APBB3-215	ENST00000510241	CENPVL3	A0A0U1RRI6	287 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	SLC25A20	O43772	301 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	FOXC1	Q12948	553 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	EBI3	Q14213	229 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	BPESC1	Q9GZL8	116 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241		Q9UF83	564 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	PRO1854	Q9UHT4	67 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	ZNF688	P0C7X2	276 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241		P0DMU3	169 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	FAM231A	P0DMU4	169 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	FAM231C	P0DMU5	169 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	PMVK	Q15126	192 aa		11.98	□□□□□ -0.49
APBB3-215	ENST00000510241	JMJD1C	Q15652	2540 aa		11.97	□□□□□ -0.49
APBB3-215	ENST00000510241		A0A0J9YXV3	536 aa		11.97	□□□□□ -0.49
APBB3-215	ENST00000510241	TMEM95	Q3KNT9	176 aa		11.97	□□□□□ -0.49
APBB3-215	ENST00000510241	SPX	Q9BT56	116 aa		11.97	□□□□□ -0.49
APBB3-215	ENST00000510241	MXRA5	Q9NR99	2828 aa		11.97	□□□□□ -0.49
APBB3-215	ENST00000510241	TRAV41	A0A0B4J266	112 aa		11.97	□□□□□ -0.49
APBB3-215	ENST00000510241	LGALS3	P17931	250 aa	Known RBP	11.97	□□□□□ -0.49
APBB3-215	ENST00000510241	BLCAP	P62952	87 aa		11.97	□□□□□ -0.49
APBB3-215	ENST00000510241	AMELX	Q99217	191 aa		11.97	□□□□□ -0.49
APBB3-215	ENST00000510241	TRAV8-3	A0A0A6YYJ7	113 aa		11.96	□□□□□ -0.49
APBB3-215	ENST00000510241	PF4V1	P10720	104 aa		11.96	□□□□□ -0.49
APBB3-215	ENST00000510241	ZNF56	Q15929	161 aa		11.96	□□□□□ -0.49
APBB3-215	ENST00000510241		U3KQE9	123 aa		11.96	□□□□□ -0.49
APBB3-215	ENST00000510241	PROK1	P58294	105 aa		11.96	□□□□□ -0.5
APBB3-215	ENST00000510241	C5orf56	Q8N8D9	126 aa		11.96	□□□□□ -0.5
APBB3-215	ENST00000510241	SLC25A29	Q8N8R3	303 aa		11.96	□□□□□ -0.5
APBB3-215	ENST00000510241	DAND5	Q8N907	189 aa		11.96	□□□□□ -0.5
APBB3-215	ENST00000510241	RHPN1-AS1	Q9BWJ2	59 aa		11.96	□□□□□ -0.5
APBB3-215	ENST00000510241	HERVK_113	P61574	105 aa		11.95	□□□□□ -0.5
APBB3-215	ENST00000510241	MINOS1	Q5TGZ0	78 aa		11.95	□□□□□ -0.5
APBB3-215	ENST00000510241	FAM159A	Q6UWV7	190 aa		11.95	□□□□□ -0.5
APBB3-215	ENST00000510241	KIF25-AS1	Q9Y6Z4	181 aa		11.95	□□□□□ -0.5
APBB3-215	ENST00000510241	TRBV7-1	A0A0A6YYK4	115 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms