RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 LOC285556D6RIA3 1793 aa0.37□□□□□ -2.35
GYPB-207ENST00000506679 ZNF142P52746 1687 aaPredicted RBP0.37□□□□□ -2.35
GYPB-207ENST00000506679 ZFYVE26Q68DK2 2539 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 MAP2P11137 1827 aaKnown RBP0.36□□□□□ -2.35
GYPB-207ENST00000506679 ZCCHC6Q5VYS8 1495 aaKnown RBP0.36□□□□□ -2.35
GYPB-207ENST00000506679 SPG11Q96JI7 2443 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 HERC2O95714 4834 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 ARHGEF10O15013 1369 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 CXorf51AA0A1B0GTR3 108 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 MCRIP1C9JLW8 97 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 CCDC179H3BU77 68 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 J3QR89 54 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 M0R2P5 195 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 NCR2O95944 276 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 CKS1BP61024 79 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 IQCJQ1A5X6 159 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 SNX29P2Q8IUI4 249 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 DYNLRB2Q8TF09 96 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 SAR1AQ9NR31 198 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 COA4Q9NYJ1 87 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 ERG28Q9UKR5 140 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 KCPQ6ZWJ8 1503 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 LAMA2P24043 3122 aaKnown RBP0.36□□□□□ -2.35
GYPB-207ENST00000506679 GCN1Q92616 2671 aaKnown RBP0.36□□□□□ -2.35
GYPB-207ENST00000506679 MEGF8Q7Z7M0 2845 aa0.36□□□□□ -2.35
GYPB-207ENST00000506679 USP9YO00507 2555 aaPredicted RBP0.36□□□□□ -2.35
GYPB-207ENST00000506679 CASZ1Q86V15 1759 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 MYH6P13533 1939 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 TRBV20-1A0A075B6N2 111 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 TRAV12-2A0A075B6T6 113 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 TRAV17A0A0B4J275 112 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 J3QLW9 94 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 FXYD1O00168 92 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 ARPC5O15511 151 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 TSPAN19P0C672 248 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 SPINK7P58062 85 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 RPL37P61927 97 aaKnown RBP0.35□□□□□ -2.35
GYPB-207ENST00000506679 ZNF56Q15929 161 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 CLLU1Q5K131 121 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 MAFIPQ8WZ33 124 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 KRTAP2-1Q9BYU5 128 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 TMEM14BQ9NUH8 114 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 KIF13AQ9H1H9 1805 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 FHAD1B1AJZ9 1412 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 ZDBF2Q9HCK1 2354 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 FLNCQ14315 2725 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 MED14O60244 1454 aa0.35□□□□□ -2.35
GYPB-207ENST00000506679 ATRQ13535 2644 aa0.34□□□□□ -2.35
GYPB-207ENST00000506679 SPAG17Q6Q759 2223 aa0.34□□□□□ -2.35
GYPB-207ENST00000506679 CPDO75976 1380 aa0.34□□□□□ -2.35
GYPB-207ENST00000506679 ESPL1Q14674 2120 aa0.34□□□□□ -2.35
GYPB-207ENST00000506679 MPC1LP0DKB6 136 aa0.34□□□□□ -2.36
GYPB-207ENST00000506679 HIST1H1AQ02539 215 aaPredicted RBP0.34□□□□□ -2.36
GYPB-207ENST00000506679 BET1LQ9NYM9 111 aa0.34□□□□□ -2.36
GYPB-207ENST00000506679 COPZ2Q9P299 210 aa0.34□□□□□ -2.36
GYPB-207ENST00000506679 LAMA3Q16787 3333 aa0.34□□□□□ -2.36
GYPB-207ENST00000506679 UBR5O95071 2799 aaPredicted RBP0.34□□□□□ -2.36
GYPB-207ENST00000506679 POLQO75417 2590 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 UTP20O75691 2785 aaKnown RBP0.33□□□□□ -2.36
GYPB-207ENST00000506679 RBBP6Q7Z6E9 1792 aaKnown RBP0.33□□□□□ -2.36
GYPB-207ENST00000506679 A0A096LNT2 108 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 LOC105371267A0A1B0GV96 52 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 M0R2Z0 102 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 LY6G6CO95867 125 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 IGLC6P0CF74 106 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 PYYP10082 97 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 SLC25A6P12236 298 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 SMCO1Q147U7 214 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 CTAGE3PQ8IX95 158 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 TMEM141Q96I45 108 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 DSCR8Q96T75 97 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 PAIP2BQ9ULR5 123 aaKnown RBP0.33□□□□□ -2.36
GYPB-207ENST00000506679 LSM2Q9Y333 95 aaKnown RBP0.33□□□□□ -2.36
GYPB-207ENST00000506679 APCP25054 2843 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 BOD1L1Q8NFC6 3051 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 KNTC1P50748 2209 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 TANC1Q9C0D5 1861 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 PLXNA1Q9UIW2 1896 aa0.33□□□□□ -2.36
GYPB-207ENST00000506679 AKAP13Q12802 2813 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 COL12A1Q99715 3063 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 LAMB1P07942 1786 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 PRG4Q92954 1404 aaPredicted RBP0.32□□□□□ -2.36
GYPB-207ENST00000506679 PARP14Q460N5 1801 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 ACANP16112 2415 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 TCRBV3S1A0A5B6 114 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 RBAKDNA6NC62 111 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 ZNF670-ZNF695F2Z2N8 137 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 SMIM21Q3B7S5 101 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 OR2T2Q6IF00 324 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 SCIMPQ6UWF3 145 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 CYP2G1PQ6ZSU1 146 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 VSTM2AQ8TAG5 236 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 FAM103A1Q9BTL3 118 aaKnown RBP0.32□□□□□ -2.36
GYPB-207ENST00000506679 SMIM3Q9BZL3 60 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 MKI67P46013 3256 aaKnown RBP0.32□□□□□ -2.36
GYPB-207ENST00000506679 PKD1L1Q8TDX9 2849 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 SYNJ1O43426 1573 aa0.32□□□□□ -2.36
GYPB-207ENST00000506679 NBEAL1Q6ZS30 2694 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms