RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 PTPN23Q9H3S7 1636 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 LTN1O94822 1766 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 UBR2Q8IWV8 1755 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 TRBV7-1A0A0A6YYK4 115 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 LOC285095A0A1B0GVY8 99 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 A0A1B0GWA3 101 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 C16orf90A8MZG2 172 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 B4DSR2 109 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 C5orf67F2Z3F1 127 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 H3BPC8 53 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 H7C2G1 150 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 MGST1P10620 155 aaKnown RBP1.8□□□□□ -2.12
LINC01088-202ENST00000505149 DEFA4P12838 97 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 DSCR4P56555 118 aaPredicted RBP1.8□□□□□ -2.12
LINC01088-202ENST00000505149 KLKP1Q107X0 134 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 FAM229BQ4G0N7 80 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 Q6ZQT0 140 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 DEFB107AQ8IZN7 70 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 MUC7Q8TAX7 377 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 GNG13Q9P2W3 67 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 HILPDAQ9Y5L2 63 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 ANKRD50Q9ULJ7 1429 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 NKTRP30414 1462 aaKnown RBP1.8□□□□□ -2.12
LINC01088-202ENST00000505149 C1orf167Q5SNV9 1468 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 CDK13Q14004 1512 aaKnown RBP1.8□□□□□ -2.12
LINC01088-202ENST00000505149 LAMC3Q9Y6N6 1575 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 TRPM1Q7Z4N2 1603 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 IQGAP3Q86VI3 1631 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 SUPT6HQ7KZ85 1726 aaKnown RBP1.8□□□□□ -2.12
LINC01088-202ENST00000505149 ZSWIM8A7E2V4 1837 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 BRWD3Q6RI45 1802 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 TUBGCP6Q96RT7 1819 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 ANKRD31Q8N7Z5 1873 aa1.8□□□□□ -2.12
LINC01088-202ENST00000505149 LOXHD1Q8IVV2 1947 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 CCDC88CQ9P219 2028 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 C17orf98A8MV24 154 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 IL4P05112 153 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 PRB4P10163 310 aaPredicted RBP1.79□□□□□ -2.12
LINC01088-202ENST00000505149 GCHFRP30047 84 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 DEFB121Q5J5C9 76 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 VMO1Q7Z5L0 202 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 FAM223AQ8IWN6 122 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 FAM167A-AS1Q96KT0 104 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 FAM103A1Q9BTL3 118 aaKnown RBP1.79□□□□□ -2.12
LINC01088-202ENST00000505149 LINC00574Q9H8X3 128 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 CDC42SE1Q9NRR8 79 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 GPATCH8Q9UKJ3 1502 aaKnown RBP1.79□□□□□ -2.12
LINC01088-202ENST00000505149 TIAM1Q13009 1591 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 LAMC1P11047 1609 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 RNF17Q9BXT8 1623 aaKnown RBP1.79□□□□□ -2.12
LINC01088-202ENST00000505149 MON2Q7Z3U7 1717 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 PEAK1Q9H792 1746 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 SCN11AQ9UI33 1791 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 PARP14Q460N5 1801 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 SBF2Q86WG5 1849 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 MYH7BA7E2Y1 1941 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 MYH4Q9Y623 1939 aa1.79□□□□□ -2.12
LINC01088-202ENST00000505149 ZNF638Q14966 1978 aaKnown RBP1.79□□□□□ -2.12
LINC01088-202ENST00000505149 DSCAML1Q8TD84 2053 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 KNDC1Q76NI1 1749 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 CROCC2H7BZ55 1655 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 ROBO1Q9Y6N7 1651 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 TARBP1Q13395 1621 aaKnown RBP1.78□□□□□ -2.12
LINC01088-202ENST00000505149 UNC13BO14795 1591 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 HMGXB3Q12766 1538 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 CEBPZOSA8MTT3 80 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 A8MUU9 505 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 IQCF6A8MYZ5 107 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 E7EUB6 86 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 H3BVH4 76 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 HMGN2P05204 90 aaKnown RBP1.78□□□□□ -2.12
LINC01088-202ENST00000505149 COX6CP09669 75 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 ZNF22P17026 224 aaPredicted RBP1.78□□□□□ -2.12
LINC01088-202ENST00000505149 EDDM3BP56851 147 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 NNATQ16517 81 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 SPANXN5Q5MJ07 72 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 FAM27BQ5VT28 67 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 ZNF818PQ6ZRF7 136 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 Q6ZS52 159 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 ZNF826PQ6ZT77 177 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 C20orf197Q8N268 126 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 TOMM5Q8N4H5 51 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 Q8N6K4 173 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 LIMD2Q9BT23 127 aa1.78□□□□□ -2.12
LINC01088-202ENST00000505149 MYH6P13533 1939 aa1.78□□□□□ -2.13
LINC01088-202ENST00000505149 PPLO60437 1756 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 ARHGEF28Q8N1W1 1705 aaKnown RBP1.77□□□□□ -2.13
LINC01088-202ENST00000505149 CTTNBP2Q8WZ74 1663 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 DIP2AQ14689 1571 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 ASXL1Q8IXJ9 1541 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 TRBV7-3A0A075B6L6 115 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 TRBV25-1A0A075B6N4 114 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 IGKV1D-37A0A075B6S9 117 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 IGKV1OR2-108A0A075B7D4 117 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 TRBV6-7A0A0A0MS04 114 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 TRAV22A0A0B4J277 110 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 MYMXA0A1B0GTQ4 84 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 ZNF815PA8K554 130 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 CHKB-CPT1BH3BT56 60 aa1.77□□□□□ -2.13
LINC01088-202ENST00000505149 LHBP01229 141 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms