RNA–Protein interactions for RNA: ENST00000504355.5

PDLIM3-205, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 510 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-205ENST00000504355 RAB5CP51148 216 aa11.09□□□□□ -0.63
PDLIM3-205ENST00000504355 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
PDLIM3-205ENST00000504355 ZFP82Q8N141 532 aa11.09□□□□□ -0.63
PDLIM3-205ENST00000504355 PGPEP1Q9NXJ5 209 aa11.09□□□□□ -0.63
PDLIM3-205ENST00000504355 A0A087WWL8 130 aa11.08□□□□□ -0.64
PDLIM3-205ENST00000504355 PRR27Q6MZM9 219 aa11.08□□□□□ -0.64
PDLIM3-205ENST00000504355 SFRP2Q96HF1 295 aa11.08□□□□□ -0.64
PDLIM3-205ENST00000504355 LRP1BQ9NZR2 4599 aa11.07□□□□□ -0.64
PDLIM3-205ENST00000504355 UFSP1Q6NVU6 142 aa11.07□□□□□ -0.64
PDLIM3-205ENST00000504355 TCTE3Q8IZS6 198 aa11.07□□□□□ -0.64
PDLIM3-205ENST00000504355 C14orf178Q8N769 122 aaPredicted RBP11.07□□□□□ -0.64
PDLIM3-205ENST00000504355 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
PDLIM3-205ENST00000504355 A0A087WTM6 91 aa11.06□□□□□ -0.64
PDLIM3-205ENST00000504355 CCL20P78556 96 aa11.06□□□□□ -0.64
PDLIM3-205ENST00000504355 RPL19P84098 196 aaKnown RBP11.06□□□□□ -0.64
PDLIM3-205ENST00000504355 Q9HAA7 133 aa11.06□□□□□ -0.64
PDLIM3-205ENST00000504355 IBA57-AS1B1ANH7 110 aa11.05□□□□□ -0.64
PDLIM3-205ENST00000504355 FUSP35637 526 aaKnown RBP eCLIP11.05□□□□□ -0.64
PDLIM3-205ENST00000504355 RPL35P42766 123 aaKnown RBP11.05□□□□□ -0.64
PDLIM3-205ENST00000504355 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
PDLIM3-205ENST00000504355 A0A087WWC5 75 aa11.04□□□□□ -0.64
PDLIM3-205ENST00000504355 TRAV1-1A0A0B4J248 108 aa11.04□□□□□ -0.64
PDLIM3-205ENST00000504355 SULT1A2P50226 295 aa11.04□□□□□ -0.64
PDLIM3-205ENST00000504355 CDPF1Q6NVV7 123 aa11.04□□□□□ -0.64
PDLIM3-205ENST00000504355 Q9UF83 564 aa11.04□□□□□ -0.64
PDLIM3-205ENST00000504355 IFNA1P01562 189 aa11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 C1QBP02746 253 aa11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 CXCL1P09341 107 aa11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 SPANXN1Q5VSR9 72 aa11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 SLC51BQ86UW2 128 aa11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 Q8N1X5 172 aa11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 DAZAP1Q96EP5 407 aaKnown RBP11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 DERL1Q9BUN8 251 aa11.03□□□□□ -0.64
PDLIM3-205ENST00000504355 SSTP61278 116 aa11.02□□□□□ -0.65
PDLIM3-205ENST00000504355 RPL36AP83881 106 aaKnown RBP11.02□□□□□ -0.65
PDLIM3-205ENST00000504355 ZNF56Q15929 161 aa11.02□□□□□ -0.65
PDLIM3-205ENST00000504355 OR10AG1Q8NH19 301 aa11.02□□□□□ -0.65
PDLIM3-205ENST00000504355 RPL36ALQ969Q0 106 aaKnown RBP11.02□□□□□ -0.65
PDLIM3-205ENST00000504355 URGCP-MRPS24S4R325 110 aa11.02□□□□□ -0.65
PDLIM3-205ENST00000504355 MUC21A0A0G2JKD1 596 aa11.01□□□□□ -0.65
PDLIM3-205ENST00000504355 MUC21A0A140T8X8 626 aa11.01□□□□□ -0.65
PDLIM3-205ENST00000504355 PDE6DO43924 150 aa11.01□□□□□ -0.65
PDLIM3-205ENST00000504355 CENPWQ5EE01 88 aa11.01□□□□□ -0.65
PDLIM3-205ENST00000504355 Q6ZNX1 250 aa11.01□□□□□ -0.65
PDLIM3-205ENST00000504355 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
PDLIM3-205ENST00000504355 hCG_2014768A0A024R1R8 64 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 TRBV10-1A0A0K0K1A3 114 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 F5H697 171 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 GNG4P50150 75 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 RAB4BP61018 213 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 MEF2BQ02080 365 aaPredicted RBP11□□□□□ -0.65
PDLIM3-205ENST00000504355 LAGE3Q14657 143 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 AKAP14Q86UN6 197 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 TM2D2Q9BX73 214 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 MED9Q9NWA0 146 aa11□□□□□ -0.65
PDLIM3-205ENST00000504355 APOBP04114 4563 aaKnown RBP11□□□□□ -0.65
PDLIM3-205ENST00000504355 SNAI2O43623 268 aa10.99□□□□□ -0.65
PDLIM3-205ENST00000504355 OR5AL1P0C617 328 aa10.99□□□□□ -0.65
PDLIM3-205ENST00000504355 SMIM17P0DL12 118 aa10.99□□□□□ -0.65
PDLIM3-205ENST00000504355 TOR2AQ5JU69 321 aa10.99□□□□□ -0.65
PDLIM3-205ENST00000504355 KCNIP4Q6PIL6 250 aa10.99□□□□□ -0.65
PDLIM3-205ENST00000504355 DAZ4Q86SG3 579 aaKnown RBP10.99□□□□□ -0.65
PDLIM3-205ENST00000504355 Q8N3U1 123 aa10.99□□□□□ -0.65
PDLIM3-205ENST00000504355 DAZ3Q9NR90 486 aaKnown RBP10.99□□□□□ -0.65
PDLIM3-205ENST00000504355 TRBV7-3A0A075B6L6 115 aa10.98□□□□□ -0.65
PDLIM3-205ENST00000504355 TRAV8-3A0A0A6YYJ7 113 aa10.98□□□□□ -0.65
PDLIM3-205ENST00000504355 RAB19A4D1S5 217 aa10.98□□□□□ -0.65
PDLIM3-205ENST00000504355 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.98□□□□□ -0.65
PDLIM3-205ENST00000504355 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
PDLIM3-205ENST00000504355 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
PDLIM3-205ENST00000504355 BCL2P10415 239 aa10.97□□□□□ -0.65
PDLIM3-205ENST00000504355 RPS20P60866 119 aaKnown RBP10.97□□□□□ -0.65
PDLIM3-205ENST00000504355 OR2D3Q8NGH3 330 aa10.97□□□□□ -0.65
PDLIM3-205ENST00000504355 VAX2Q9UIW0 290 aa10.97□□□□□ -0.65
PDLIM3-205ENST00000504355 DNAH5Q8TE73 4624 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 A0A087WX48 190 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 IGLV5-52A0A0A0MRZ9 124 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 XKRY2A2RUG3 117 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 LRCOL1A6NCL2 159 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 GCSHP23434 173 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 UBE2D3P61077 147 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 UBE2D2P62837 147 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 SMIM12Q96EX1 92 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 BIN3Q9NQY0 253 aa10.96□□□□□ -0.65
PDLIM3-205ENST00000504355 IGLV2-8P01709 118 aa10.95□□□□□ -0.66
PDLIM3-205ENST00000504355 P01737 135 aa10.95□□□□□ -0.66
PDLIM3-205ENST00000504355 GZMBP10144 247 aa10.95□□□□□ -0.66
PDLIM3-205ENST00000504355 TAGLN2P37802 199 aaKnown RBP10.95□□□□□ -0.66
PDLIM3-205ENST00000504355 NIT1Q86X76 327 aa10.95□□□□□ -0.66
PDLIM3-205ENST00000504355 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
PDLIM3-205ENST00000504355 NEXN-AS1Q8NBZ9 246 aa10.95□□□□□ -0.66
PDLIM3-205ENST00000504355 OR10G8Q8NGN5 311 aa10.95□□□□□ -0.66
PDLIM3-205ENST00000504355 TMEM262E9PQX1 116 aa10.94□□□□□ -0.66
PDLIM3-205ENST00000504355 ELOBQ15370 118 aa10.94□□□□□ -0.66
PDLIM3-205ENST00000504355 C9orf62Q8N4C0 152 aa10.94□□□□□ -0.66
PDLIM3-205ENST00000504355 Q8N814 137 aa10.94□□□□□ -0.66
PDLIM3-205ENST00000504355 NTN5Q8WTR8 489 aaPredicted RBP10.94□□□□□ -0.66
PDLIM3-205ENST00000504355 RMI2Q96E14 147 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms