RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 ZFP82Q8N141 532 aa9.2□□□□□ -0.94
HOXC6-203ENST00000504315 C14orf178Q8N769 122 aaPredicted RBP9.2□□□□□ -0.94
HOXC6-203ENST00000504315 Q9UF83 564 aa9.2□□□□□ -0.94
HOXC6-203ENST00000504315 APOBP04114 4563 aaKnown RBP9.19□□□□□ -0.94
HOXC6-203ENST00000504315 TMSB15BA0A087X1C1 80 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 GAGE12JA6NER3 117 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 EREGO14944 169 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 SNAI2O43623 268 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 CCL20P78556 96 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 GAGE1Q13065 139 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 GAGE4Q13068 117 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 GAGE5Q13069 117 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 GAGE13Q4V321 117 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 SSBP4Q9BWG4 385 aaPredicted RBP9.19□□□□□ -0.94
HOXC6-203ENST00000504315 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
HOXC6-203ENST00000504315 M0R381 172 aa9.18□□□□□ -0.94
HOXC6-203ENST00000504315 RPL35P42766 123 aaKnown RBP9.18□□□□□ -0.94
HOXC6-203ENST00000504315 RPL19P84098 196 aaKnown RBP9.18□□□□□ -0.94
HOXC6-203ENST00000504315 LAGE3Q14657 143 aa9.18□□□□□ -0.94
HOXC6-203ENST00000504315 FAM74A4Q5TZK3 123 aa9.18□□□□□ -0.94
HOXC6-203ENST00000504315 SLC51BQ86UW2 128 aa9.18□□□□□ -0.94
HOXC6-203ENST00000504315 GNG13Q9P2W3 67 aa9.18□□□□□ -0.94
HOXC6-203ENST00000504315 A0A087WWL8 130 aa9.17□□□□□ -0.94
HOXC6-203ENST00000504315 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
HOXC6-203ENST00000504315 OR5AL1P0C617 328 aa9.17□□□□□ -0.94
HOXC6-203ENST00000504315 DERL1Q9BUN8 251 aa9.17□□□□□ -0.94
HOXC6-203ENST00000504315 KRTAP4-5Q9BYR2 181 aa9.17□□□□□ -0.94
HOXC6-203ENST00000504315 A0A087WWC5 75 aa9.16□□□□□ -0.94
HOXC6-203ENST00000504315 TEX46H3BTG2 121 aa9.16□□□□□ -0.94
HOXC6-203ENST00000504315 IGLV2-8P01709 118 aa9.16□□□□□ -0.94
HOXC6-203ENST00000504315 SMIM12Q96EX1 92 aa9.16□□□□□ -0.94
HOXC6-203ENST00000504315 LRCOL1A6NCL2 159 aa9.15□□□□□ -0.94
HOXC6-203ENST00000504315 IGHV3-30P01768 117 aa9.15□□□□□ -0.94
HOXC6-203ENST00000504315 IGHV3-33P01772 117 aa9.15□□□□□ -0.94
HOXC6-203ENST00000504315 IGHV3-30-3P0DP02 117 aa9.15□□□□□ -0.94
HOXC6-203ENST00000504315 IGHV3-30-5P0DP03 117 aa9.15□□□□□ -0.94
HOXC6-203ENST00000504315 MEF2BQ02080 365 aaPredicted RBP9.15□□□□□ -0.94
HOXC6-203ENST00000504315 OR10G8Q8NGN5 311 aa9.15□□□□□ -0.94
HOXC6-203ENST00000504315 OR10AG1Q8NH19 301 aa9.15□□□□□ -0.94
HOXC6-203ENST00000504315 RAB4BP61018 213 aa9.14□□□□□ -0.95
HOXC6-203ENST00000504315 CENPWQ5EE01 88 aa9.14□□□□□ -0.95
HOXC6-203ENST00000504315 PRR27Q6MZM9 219 aa9.14□□□□□ -0.95
HOXC6-203ENST00000504315 Q8N3U1 123 aa9.14□□□□□ -0.95
HOXC6-203ENST00000504315 ABCA13Q86UQ4 5058 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 C19orf71A6NCJ1 209 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 PDE6DO43924 150 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 IFNA1P01562 189 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 BCL2P10415 239 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 UBE2D3P61077 147 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 UBE2D2P62837 147 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 RPL36AP83881 106 aaKnown RBP9.13□□□□□ -0.95
HOXC6-203ENST00000504315 C9orf62Q8N4C0 152 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 MAPKAPK5-AS1Q8N8E1 139 aa9.13□□□□□ -0.95
HOXC6-203ENST00000504315 RPL36ALQ969Q0 106 aaKnown RBP9.13□□□□□ -0.95
HOXC6-203ENST00000504315 TRBV20OR9-2A0A075B6H5 130 aa9.12□□□□□ -0.95
HOXC6-203ENST00000504315 IGLC6P0CF74 106 aa9.12□□□□□ -0.95
HOXC6-203ENST00000504315 FUSP35637 526 aaKnown RBP eCLIP9.12□□□□□ -0.956e-7■■■□□ 18.2
HOXC6-203ENST00000504315 TAGLN2P37802 199 aaKnown RBP9.12□□□□□ -0.95
HOXC6-203ENST00000504315 Q8N1X5 172 aa9.12□□□□□ -0.95
HOXC6-203ENST00000504315 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
HOXC6-203ENST00000504315 PSCAO43653 123 aa9.11□□□□□ -0.95
HOXC6-203ENST00000504315 SPANXN1Q5VSR9 72 aa9.11□□□□□ -0.95
HOXC6-203ENST00000504315 AKAP14Q86UN6 197 aa9.11□□□□□ -0.95
HOXC6-203ENST00000504315 NIT1Q86X76 327 aa9.11□□□□□ -0.95
HOXC6-203ENST00000504315 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
HOXC6-203ENST00000504315 CHCHD7Q9BUK0 85 aa9.11□□□□□ -0.95
HOXC6-203ENST00000504315 Q9HAA7 133 aa9.11□□□□□ -0.95
HOXC6-203ENST00000504315 VAX2Q9UIW0 290 aa9.11□□□□□ -0.95
HOXC6-203ENST00000504315 TRAV8-3A0A0A6YYJ7 113 aa9.1□□□□□ -0.95
HOXC6-203ENST00000504315 RAB19A4D1S5 217 aa9.1□□□□□ -0.95
HOXC6-203ENST00000504315 GNG4P50150 75 aa9.1□□□□□ -0.95
HOXC6-203ENST00000504315 RPS20P60866 119 aaKnown RBP9.1□□□□□ -0.95
HOXC6-203ENST00000504315 ZNF56Q15929 161 aa9.1□□□□□ -0.95
HOXC6-203ENST00000504315 TOR2AQ5JU69 321 aa9.1□□□□□ -0.95
HOXC6-203ENST00000504315 DAZ4Q86SG3 579 aaKnown RBP9.1□□□□□ -0.95
HOXC6-203ENST00000504315 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
HOXC6-203ENST00000504315 TM2D2Q9BX73 214 aa9.1□□□□□ -0.95
HOXC6-203ENST00000504315 DAZ3Q9NR90 486 aaKnown RBP9.1□□□□□ -0.95
HOXC6-203ENST00000504315 MUC21A0A0G2JKD1 596 aa9.09□□□□□ -0.95
HOXC6-203ENST00000504315 MUC21A0A140T8X8 626 aa9.09□□□□□ -0.95
HOXC6-203ENST00000504315 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
HOXC6-203ENST00000504315 Q8N814 137 aa9.09□□□□□ -0.95
HOXC6-203ENST00000504315 LYPD6BQ8NI32 183 aa9.09□□□□□ -0.95
HOXC6-203ENST00000504315 DAZAP1Q96EP5 407 aaKnown RBP9.09□□□□□ -0.95
HOXC6-203ENST00000504315 AP1S3Q96PC3 154 aa9.09□□□□□ -0.95
HOXC6-203ENST00000504315 BIN3Q9NQY0 253 aa9.09□□□□□ -0.95
HOXC6-203ENST00000504315 MED9Q9NWA0 146 aa9.09□□□□□ -0.95
HOXC6-203ENST00000504315 GZMBP10144 247 aa9.08□□□□□ -0.96
HOXC6-203ENST00000504315 GCSHP23434 173 aa9.08□□□□□ -0.96
HOXC6-203ENST00000504315 XGP55808 180 aa9.08□□□□□ -0.96
HOXC6-203ENST00000504315 FER1L6-AS1Q8NA97 138 aa9.08□□□□□ -0.96
HOXC6-203ENST00000504315 OR2D3Q8NGH3 330 aa9.08□□□□□ -0.96
HOXC6-203ENST00000504315 TRBV6-8A0A0A6YYG3 113 aa9.07□□□□□ -0.96
HOXC6-203ENST00000504315 CACNG7P62955 275 aa9.07□□□□□ -0.96
HOXC6-203ENST00000504315 ATRAIDQ6UW56 229 aa9.07□□□□□ -0.96
HOXC6-203ENST00000504315 COX11Q9Y6N1 276 aa9.07□□□□□ -0.96
HOXC6-203ENST00000504315 URGCP-MRPS24S4R325 110 aa9.07□□□□□ -0.96
HOXC6-203ENST00000504315 hCG_2014768A0A024R1R8 64 aa9.06□□□□□ -0.96
HOXC6-203ENST00000504315 XKRY2A2RUG3 117 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms