RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 COL12A1Q99715 3063 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 CYSRT1A8MQ03 144 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 MSMBP08118 114 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 IGHV4-31P0DP07 118 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 LEPP41159 167 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 DNAH17Q9UFH2 4485 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 IGHV4-61A0A0C4DH41 118 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 ENSAO43768 121 aaKnown RBP4.69□□□□□ -1.66
COPB2-204ENST00000504295 CFC1BP0CG36 223 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 CFC1P0CG37 223 aa4.69□□□□□ -1.66
COPB2-204ENST00000504295 HIST1H4AP62805 103 aaKnown RBP4.69□□□□□ -1.66
COPB2-204ENST00000504295 IGHV3-72A0A0B4J1Y9 119 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 LYNX1G3V0Z9 82 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 H3BUT2 72 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 K7ERJ3 54 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 ATP6V0E1O15342 81 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 LYNX1P0DP58 116 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 MRPS36P82909 103 aaKnown RBP4.68□□□□□ -1.66
COPB2-204ENST00000504295 Q8N1Y9 231 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 TRAV2A0A0B4J234 112 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 K7EQM0 130 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 LY6HO94772 140 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 LY6G6DO95868 133 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 TGFAP01135 160 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 SMIM13P0DJ93 91 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 ZNF22P17026 224 aaPredicted RBP4.68□□□□□ -1.66
COPB2-204ENST00000504295 INSL3P51460 131 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 PLGLAQ15195 96 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 FA2HQ7L5A8 372 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 LINC00477Q96M19 166 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 TPPP3Q9BW30 176 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 DNAH9Q9NYC9 4486 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 IGHV3-16A0A0C4DH30 117 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 HSBP1L1C9JCN9 74 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 M0QY20 66 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 TIMM17BO60830 172 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 PSMB8P28062 276 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 WFDC2Q14508 124 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 DEFB108BQ8NET1 73 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 TMEM141Q96I45 108 aa4.68□□□□□ -1.66
COPB2-204ENST00000504295 CREBBPQ92793 2442 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 GAGE10A6NGK3 116 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 TWIST1Q15672 202 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 Q6ZS46 218 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 CITED2Q99967 270 aaPredicted RBP4.67□□□□□ -1.66
COPB2-204ENST00000504295 VCX2Q9H322 139 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 SPCS1Q9Y6A9 102 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 SPG11Q96JI7 2443 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 RBMY1A1P0DJD3 496 aaKnown RBP4.67□□□□□ -1.66
COPB2-204ENST00000504295 RBMY1CP0DJD4 496 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 SUMO2P61956 95 aaKnown RBP4.67□□□□□ -1.66
COPB2-204ENST00000504295 RBMY1FQ15415 496 aaKnown RBP4.67□□□□□ -1.66
COPB2-204ENST00000504295 ORMDL2Q53FV1 153 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 S100A7AQ86SG5 101 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 RNF182Q8N6D2 247 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 IGLV5-39A0A0G2JS06 123 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 CIDEAO60543 219 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 ZC2HC1BQ5TFG8 222 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 RPEQ96AT9 228 aa4.67□□□□□ -1.66
COPB2-204ENST00000504295 ABCA1O95477 2261 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 TRAV40A0A0B4J280 105 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 GAGE12HA6NDE8 117 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 ELANEP08246 267 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 RHOHQ15669 191 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 BATFQ16520 125 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 UNQ9165/PRO28630Q6UXU0 137 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 NOTCH2Q04721 2471 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 MED13LQ71F56 2210 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 MXRA5Q9NR99 2828 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 MAP1AP78559 2803 aaPredicted RBP4.66□□□□□ -1.66
COPB2-204ENST00000504295 C2orf82Q6UX34 121 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 C10orf126Q8N4M7 172 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 AKAP6Q13023 2319 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 LOC107984156A0A0G2JMH3 177 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 TRBV30A0A0K0K1B3 111 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.66□□□□□ -1.66
COPB2-204ENST00000504295 CKS2P33552 79 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 ARL17AQ8IVW1 177 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 C11orf72Q8NBR9 251 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 DPH3P1Q9H4G8 78 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 AAMDCQ9H7C9 122 aa4.66□□□□□ -1.66
COPB2-204ENST00000504295 IGHV3-21A0A0B4J1V1 117 aa4.65□□□□□ -1.66
COPB2-204ENST00000504295 OVOL1O14753 267 aa4.65□□□□□ -1.66
COPB2-204ENST00000504295 IGHV3-33P01772 117 aa4.65□□□□□ -1.66
COPB2-204ENST00000504295 AZU1P20160 251 aa4.65□□□□□ -1.66
COPB2-204ENST00000504295 C15orf32Q32M92 178 aa4.65□□□□□ -1.66
COPB2-204ENST00000504295 PRSS3P2Q8NHM4 247 aa4.65□□□□□ -1.66
COPB2-204ENST00000504295 ZNF418Q8TF45 676 aaPredicted RBP4.65□□□□□ -1.66
COPB2-204ENST00000504295 DAZAP1Q96EP5 407 aaKnown RBP4.65□□□□□ -1.66
COPB2-204ENST00000504295 ABCA12Q86UK0 2595 aa4.65□□□□□ -1.66
COPB2-204ENST00000504295 A0A0J9YXY3 114 aa4.65□□□□□ -1.67
COPB2-204ENST00000504295 TRBV7-7A0A0K0K1E9 115 aa4.65□□□□□ -1.67
COPB2-204ENST00000504295 CRLF1O75462 422 aa4.65□□□□□ -1.67
COPB2-204ENST00000504295 MRPL23Q16540 153 aaKnown RBP4.65□□□□□ -1.67
COPB2-204ENST00000504295 RPL39LQ96EH5 51 aaKnown RBP4.65□□□□□ -1.67
COPB2-204ENST00000504295 HINT2Q9BX68 163 aa4.65□□□□□ -1.67
COPB2-204ENST00000504295 PGPEP1Q9NXJ5 209 aa4.65□□□□□ -1.67
COPB2-204ENST00000504295 PDZD2O15018 2839 aa4.65□□□□□ -1.67
COPB2-204ENST00000504295 XGP55808 180 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms