RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 SPATA12Q7Z6I5 190 aa11.43□□□□□ -0.58
MATR3-208ENST00000504045 ATP6V0E2Q8NHE4 81 aa11.43□□□□□ -0.58
MATR3-208ENST00000504045 HSPG2P98160 4391 aa11.43□□□□□ -0.58
MATR3-208ENST00000504045 IGLV2-8P01709 118 aa11.42□□□□□ -0.58
MATR3-208ENST00000504045 CRYGDP07320 174 aa11.42□□□□□ -0.58
MATR3-208ENST00000504045 EVI2AP22794 236 aa11.42□□□□□ -0.58
MATR3-208ENST00000504045 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
MATR3-208ENST00000504045 CENPWQ5EE01 88 aa11.42□□□□□ -0.58
MATR3-208ENST00000504045 ZFP82Q8N141 532 aa11.42□□□□□ -0.58
MATR3-208ENST00000504045 OR10AG1Q8NH19 301 aa11.42□□□□□ -0.58
MATR3-208ENST00000504045 APOBP04114 4563 aaKnown RBP11.41□□□□□ -0.58
MATR3-208ENST00000504045 IGHV3-38A0A0C4DH36 116 aa11.41□□□□□ -0.58
MATR3-208ENST00000504045 RAB19A4D1S5 217 aa11.41□□□□□ -0.58
MATR3-208ENST00000504045 TEX46H3BTG2 121 aa11.41□□□□□ -0.58
MATR3-208ENST00000504045 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
MATR3-208ENST00000504045 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
MATR3-208ENST00000504045 GTSF1LQ9H1H1 148 aa11.41□□□□□ -0.58
MATR3-208ENST00000504045 MSRB1Q9NZV6 116 aa11.41□□□□□ -0.58
MATR3-208ENST00000504045 TRAV9-2A0A087WT02 112 aa11.4□□□□□ -0.58
MATR3-208ENST00000504045 MUC21A0A0G2JKD1 596 aa11.4□□□□□ -0.58
MATR3-208ENST00000504045 MUC21A0A140T8X8 626 aa11.4□□□□□ -0.58
MATR3-208ENST00000504045 RHODO00212 210 aa11.4□□□□□ -0.58
MATR3-208ENST00000504045 BCL2P10415 239 aa11.4□□□□□ -0.58
MATR3-208ENST00000504045 LELP1Q5T871 98 aa11.4□□□□□ -0.58
MATR3-208ENST00000504045 CXCL1P09341 107 aa11.4□□□□□ -0.59
MATR3-208ENST00000504045 TRBV20OR9-2A0A075B6H5 130 aa11.39□□□□□ -0.59
MATR3-208ENST00000504045 TRAV8-6A0A0B4J262 113 aa11.39□□□□□ -0.59
MATR3-208ENST00000504045 SNAI2O43623 268 aa11.39□□□□□ -0.59
MATR3-208ENST00000504045 LINC01556Q5JQF7 62 aa11.39□□□□□ -0.59
MATR3-208ENST00000504045 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
MATR3-208ENST00000504045 Q8N3U1 123 aa11.39□□□□□ -0.59
MATR3-208ENST00000504045 SSBP4Q9BWG4 385 aaPredicted RBP11.39□□□□□ -0.59
MATR3-208ENST00000504045 K7EP13 123 aa11.38□□□□□ -0.59
MATR3-208ENST00000504045 IFNA1P01562 189 aa11.38□□□□□ -0.59
MATR3-208ENST00000504045 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
MATR3-208ENST00000504045 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
MATR3-208ENST00000504045 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
MATR3-208ENST00000504045 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
MATR3-208ENST00000504045 FUSP35637 526 aaKnown RBP eCLIP11.38□□□□□ -0.591e-7■■■■□ 24.9
MATR3-208ENST00000504045 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
MATR3-208ENST00000504045 MED9Q9NWA0 146 aa11.38□□□□□ -0.59
MATR3-208ENST00000504045 PDE6DO43924 150 aa11.37□□□□□ -0.59
MATR3-208ENST00000504045 OR5AL1P0C617 328 aa11.37□□□□□ -0.59
MATR3-208ENST00000504045 GZMBP10144 247 aa11.37□□□□□ -0.59
MATR3-208ENST00000504045 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
MATR3-208ENST00000504045 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
MATR3-208ENST00000504045 VAX2Q9UIW0 290 aa11.37□□□□□ -0.59
MATR3-208ENST00000504045 C19orf71A6NCJ1 209 aa11.36□□□□□ -0.59
MATR3-208ENST00000504045 ATP6V1G1O75348 118 aa11.36□□□□□ -0.59
MATR3-208ENST00000504045 GNG4P50150 75 aa11.36□□□□□ -0.59
MATR3-208ENST00000504045 SSTP61278 116 aa11.36□□□□□ -0.59
MATR3-208ENST00000504045 PCLOQ9Y6V0 5065 aa11.36□□□□□ -0.59
MATR3-208ENST00000504045 RBFOX3A6NFN3 312 aa11.35□□□□□ -0.59
MATR3-208ENST00000504045 ERVFC1-1P60608 527 aa11.35□□□□□ -0.59
MATR3-208ENST00000504045 SPANXN1Q5VSR9 72 aa11.35□□□□□ -0.59
MATR3-208ENST00000504045 A0A087WTM6 91 aa11.34□□□□□ -0.59
MATR3-208ENST00000504045 IBA57-AS1B1ANH7 110 aa11.34□□□□□ -0.59
MATR3-208ENST00000504045 ZNF56Q15929 161 aa11.34□□□□□ -0.59
MATR3-208ENST00000504045 OR2D3Q8NGH3 330 aa11.34□□□□□ -0.59
MATR3-208ENST00000504045 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
MATR3-208ENST00000504045 Q9HAA7 133 aa11.34□□□□□ -0.59
MATR3-208ENST00000504045 IGLC6P0CF74 106 aa11.33□□□□□ -0.6
MATR3-208ENST00000504045 DAZAP1Q96EP5 407 aaKnown RBP11.33□□□□□ -0.6
MATR3-208ENST00000504045 SMIM12Q96EX1 92 aa11.33□□□□□ -0.6
MATR3-208ENST00000504045 TRBV10-1A0A0K0K1A3 114 aa11.32□□□□□ -0.6
MATR3-208ENST00000504045 RAB4BP61018 213 aa11.32□□□□□ -0.6
MATR3-208ENST00000504045 TPPP3Q9BW30 176 aa11.32□□□□□ -0.6
MATR3-208ENST00000504045 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
MATR3-208ENST00000504045 UBE2D3P61077 147 aa11.31□□□□□ -0.6
MATR3-208ENST00000504045 UBE2D2P62837 147 aa11.31□□□□□ -0.6
MATR3-208ENST00000504045 BLOC1S1P78537 153 aa11.31□□□□□ -0.6
MATR3-208ENST00000504045 FER1L6-AS1Q8NA97 138 aa11.31□□□□□ -0.6
MATR3-208ENST00000504045 NEXN-AS1Q8NBZ9 246 aa11.31□□□□□ -0.6
MATR3-208ENST00000504045 LYPD6BQ8NI32 183 aa11.31□□□□□ -0.6
MATR3-208ENST00000504045 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 TRBV7-3A0A075B6L6 115 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 A0A087WWC5 75 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 P01737 135 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 TAGLN2P37802 199 aaKnown RBP11.3□□□□□ -0.6
MATR3-208ENST00000504045 RPL36AP83881 106 aaKnown RBP11.3□□□□□ -0.6
MATR3-208ENST00000504045 DAZ4Q86SG3 579 aaKnown RBP11.3□□□□□ -0.6
MATR3-208ENST00000504045 OR10G8Q8NGN5 311 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 RPL36ALQ969Q0 106 aaKnown RBP11.3□□□□□ -0.6
MATR3-208ENST00000504045 DAZ3Q9NR90 486 aaKnown RBP11.3□□□□□ -0.6
MATR3-208ENST00000504045 K7EN84 100 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 EREGO14944 169 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 RPS20P60866 119 aaKnown RBP11.3□□□□□ -0.6
MATR3-208ENST00000504045 NUDT10Q8NFP7 164 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
MATR3-208ENST00000504045 F5H697 171 aa11.29□□□□□ -0.6
MATR3-208ENST00000504045 OCC1Q8TAD7 63 aa11.29□□□□□ -0.6
MATR3-208ENST00000504045 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
MATR3-208ENST00000504045 LRCOL1A6NCL2 159 aa11.28□□□□□ -0.6
MATR3-208ENST00000504045 PSCAO43653 123 aa11.28□□□□□ -0.6
MATR3-208ENST00000504045 NIT1Q86X76 327 aa11.28□□□□□ -0.6
MATR3-208ENST00000504045 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
MATR3-208ENST00000504045 RNASE7Q9H1E1 156 aaKnown RBP11.28□□□□□ -0.6
MATR3-208ENST00000504045 LAGE3Q14657 143 aa11.27□□□□□ -0.61
MATR3-208ENST00000504045 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms