RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 SPTBP11277 2137 aa4.96□□□□□ -1.62
CLCN3-203ENST00000502998 A0A1W2PQD3 144 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 RBMY1BA6NDE4 496 aaKnown RBP4.95□□□□□ -1.62
CLCN3-203ENST00000502998 RBMY1EA6NEQ0 496 aaKnown RBP4.95□□□□□ -1.62
CLCN3-203ENST00000502998 H3BP45 60 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 RBMY1DP0C7P1 496 aaKnown RBP4.95□□□□□ -1.62
CLCN3-203ENST00000502998 RBMY1A1P0DJD3 496 aaKnown RBP4.95□□□□□ -1.62
CLCN3-203ENST00000502998 RBMY1CP0DJD4 496 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 LAGE3Q14657 143 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 RBMY1FQ15415 496 aaKnown RBP4.95□□□□□ -1.62
CLCN3-203ENST00000502998 KRTAP27-1Q3LI81 207 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 MYO7BQ6PIF6 2116 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 UNQ9165/PRO28630Q6UXU0 137 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 C6orf223Q8N319 242 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 LYZL4Q96KX0 146 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 FER1L5A0AVI2 2057 aa4.95□□□□□ -1.62
CLCN3-203ENST00000502998 A0A096LNJ9 63 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 TRAV3A0A0B4J244 114 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 TRBV30A0A0K0K1B3 111 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 LINC01546A6NGU7 62 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 IQCF6A8MYZ5 107 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 M0R378 163 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 PLNP26678 52 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 CKS2P33552 79 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 XCL1P47992 114 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 FXYD4P59646 89 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 RPL11P62913 178 aaKnown RBP4.94□□□□□ -1.62
CLCN3-203ENST00000502998 RIGQ13278 110 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 SS18Q15532 418 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 MLANAQ16655 118 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 IGFL3Q6UXB1 125 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 Q8N2B8 174 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 Q9H3A6 140 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 XCL2Q9UBD3 114 aa4.94□□□□□ -1.62
CLCN3-203ENST00000502998 H7BZZ5 65 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 CCL24O00175 119 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 RBM3P98179 157 aaKnown RBP4.93□□□□□ -1.62
CLCN3-203ENST00000502998 KISS1Q15726 138 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 SPANXN5Q5MJ07 72 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 GFRALQ6UXV0 394 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 Q6ZVQ6 151 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 PHF5AQ7RTV0 110 aaKnown RBP4.93□□□□□ -1.62
CLCN3-203ENST00000502998 COX8CQ7Z4L0 72 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 MAPKAPK5-AS1Q8N8E1 139 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 RNASE6Q93091 150 aaKnown RBP4.93□□□□□ -1.62
CLCN3-203ENST00000502998 RPP21Q9H633 154 aaKnown RBP4.93□□□□□ -1.62
CLCN3-203ENST00000502998 ZNF355PQ9NSJ1 428 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 DKK2Q9UBU2 259 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 TIMM8BQ9Y5J9 83 aaPredicted RBP4.93□□□□□ -1.62
CLCN3-203ENST00000502998 STAB1Q9NY15 2570 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 ABCA4P78363 2273 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 EML6Q6ZMW3 1958 aa4.93□□□□□ -1.62
CLCN3-203ENST00000502998 ZNF469Q96JG9 3925 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-203ENST00000502998 CSPG4Q6UVK1 2322 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 AGRNO00468 2067 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 IGKV1D-8A0A087WSZ0 117 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-203ENST00000502998 ZNF73O43830 326 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-203ENST00000502998 HMGN2P05204 90 aaKnown RBP4.92□□□□□ -1.62
CLCN3-203ENST00000502998 COX6CP09669 75 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 CFC1BP0CG36 223 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 CFC1P0CG37 223 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 IAPPP10997 89 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 ZNF22P17026 224 aaPredicted RBP4.92□□□□□ -1.62
CLCN3-203ENST00000502998 UBE2BP63146 152 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 Q0VFX4 171 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 KLKP1Q107X0 134 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 FAM222AQ5U5X8 452 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 RUSC1-AS1Q66K80 236 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 LCA10Q71F78 164 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 VN1R4Q7Z5H5 301 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 MKXQ8IYA7 352 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 ZNF714Q96N38 554 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 FANCD2OSQ96PS1 177 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 U3KQK5 164 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 DYSFO75923 2080 aa4.92□□□□□ -1.62
CLCN3-203ENST00000502998 NBEAL1Q6ZS30 2694 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 TANC2Q9HCD6 1990 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 IGKV1-8A0A0C4DH67 115 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 PMS2P5A8MQ11 134 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 H0YGG7 62 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 H3BSH0 61 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 K7EMI3 77 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 OVOL3O00110 214 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 IGHV3-33P01772 117 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 INAFM2P0DMQ5 153 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 ZNF138P52744 262 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 CRIP2P52943 208 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-203ENST00000502998 TFF3Q07654 80 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 NSUN5P1Q3KNT7 163 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 SMCR5Q8TEV8 140 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 FAM168AQ92567 244 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 SPTSSAQ969W0 71 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 SPACA5Q96QH8 159 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 LINC00588Q9Y4M8 146 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 RTTNQ86VV8 2226 aa4.91□□□□□ -1.62
CLCN3-203ENST00000502998 TLN2Q9Y4G6 2542 aa4.9□□□□□ -1.62
CLCN3-203ENST00000502998 IGLV3-12A0A075B6K2 115 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 IGHV1-45A0A0A0MS14 117 aa4.9□□□□□ -1.63
CLCN3-203ENST00000502998 TRAV13-2A0A0B4J235 113 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms