RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CRYGDP07320 174 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 TIRAPP58753 221 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 GAGE1Q13065 139 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 GAGE4Q13068 117 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 GAGE5Q13069 117 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 GAGE13Q4V321 117 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 OR10AG1Q8NH19 301 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 KRTAP1-5Q9BYS1 174 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 LY96Q9Y6Y9 160 aa8.75□□□□□ -1.01
HSPG2-213ENST00000498495 TRAV8-6A0A0B4J262 113 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 MUC21A0A0G2JKD1 596 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 MUC21A0A140T8X8 626 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 GZMBP10144 247 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 BTF3P20290 206 aaKnown RBP8.74□□□□□ -1.01
HSPG2-213ENST00000498495 EVI2AP22794 236 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 CEBPGP53567 150 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 TOR2AQ5JU69 321 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 WFDC10BQ8IUB3 73 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 C14orf178Q8N769 122 aaPredicted RBP8.74□□□□□ -1.01
HSPG2-213ENST00000498495 OCC1Q8TAD7 63 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 GTSF1LQ9H1H1 148 aa8.74□□□□□ -1.01
HSPG2-213ENST00000498495 A0A1B0GVY2 172 aa8.73□□□□□ -1.01
HSPG2-213ENST00000498495 OR10J3Q5JRS4 329 aa8.73□□□□□ -1.01
HSPG2-213ENST00000498495 FER1L6-AS1Q8NA97 138 aa8.73□□□□□ -1.01
HSPG2-213ENST00000498495 NUDT10Q8NFP7 164 aa8.73□□□□□ -1.01
HSPG2-213ENST00000498495 NUDT11Q96G61 164 aa8.73□□□□□ -1.01
HSPG2-213ENST00000498495 TPPP3Q9BW30 176 aa8.73□□□□□ -1.01
HSPG2-213ENST00000498495 K7EP13 123 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 DNAH10OSP0CZ25 163 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 SMIM17P0DL12 118 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 RAB4BP61018 213 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 TNP2Q05952 138 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 LELP1Q5T871 98 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 TEX261Q6UWH6 196 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 Q9UF83 564 aa8.72□□□□□ -1.01
HSPG2-213ENST00000498495 DNAH2Q9P225 4427 aa8.71□□□□□ -1.01
HSPG2-213ENST00000498495 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.02
HSPG2-213ENST00000498495 F2Z2F3 143 aa8.71□□□□□ -1.02
HSPG2-213ENST00000498495 F5H697 171 aa8.71□□□□□ -1.02
HSPG2-213ENST00000498495 NDUFS6O75380 124 aaKnown RBP8.71□□□□□ -1.02
HSPG2-213ENST00000498495 IGLC6P0CF74 106 aa8.71□□□□□ -1.02
HSPG2-213ENST00000498495 LINC00315P59091 139 aa8.71□□□□□ -1.02
HSPG2-213ENST00000498495 CACNG7P62955 275 aa8.71□□□□□ -1.02
HSPG2-213ENST00000498495 ZNF56Q15929 161 aa8.71□□□□□ -1.02
HSPG2-213ENST00000498495 FRAS1Q86XX4 4008 aa8.7□□□□□ -1.02
HSPG2-213ENST00000498495 TRBV10-1A0A0K0K1A3 114 aa8.7□□□□□ -1.02
HSPG2-213ENST00000498495 K7EN84 100 aa8.7□□□□□ -1.02
HSPG2-213ENST00000498495 RPL36AP83881 106 aaKnown RBP8.7□□□□□ -1.02
HSPG2-213ENST00000498495 RPL36ALQ969Q0 106 aaKnown RBP8.7□□□□□ -1.02
HSPG2-213ENST00000498495 RNASE7Q9H1E1 156 aaKnown RBP8.7□□□□□ -1.02
HSPG2-213ENST00000498495 A0A087WWC5 75 aa8.69□□□□□ -1.02
HSPG2-213ENST00000498495 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
HSPG2-213ENST00000498495 LINC00694P0DN24 101 aa8.69□□□□□ -1.02
HSPG2-213ENST00000498495 LYZL1Q6UWQ5 148 aa8.69□□□□□ -1.02
HSPG2-213ENST00000498495 NFE4Q86UQ8 179 aa8.69□□□□□ -1.02
HSPG2-213ENST00000498495 C10orf126Q8N4M7 172 aa8.69□□□□□ -1.02
HSPG2-213ENST00000498495 AP1S3Q96PC3 154 aa8.69□□□□□ -1.02
HSPG2-213ENST00000498495 RPP21Q9H633 154 aaKnown RBP8.69□□□□□ -1.02
HSPG2-213ENST00000498495 TNFRSF18Q9Y5U5 241 aa8.69□□□□□ -1.02
HSPG2-213ENST00000498495 TRBV7-3A0A075B6L6 115 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 ZNF727A8MUV8 499 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
HSPG2-213ENST00000498495 NTF3P20783 257 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 ERVFC1-1P60608 527 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 LINC01556Q5JQF7 62 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 SMIM7Q9BQ49 75 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 MSRB1Q9NZV6 116 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 DNAH17Q9UFH2 4485 aa8.68□□□□□ -1.02
HSPG2-213ENST00000498495 IGHV3-30P01768 117 aa8.67□□□□□ -1.02
HSPG2-213ENST00000498495 IGHV3-33P01772 117 aa8.67□□□□□ -1.02
HSPG2-213ENST00000498495 IGHV3-30-3P0DP02 117 aa8.67□□□□□ -1.02
HSPG2-213ENST00000498495 IGHV3-30-5P0DP03 117 aa8.67□□□□□ -1.02
HSPG2-213ENST00000498495 WDR73Q6P4I2 378 aa8.67□□□□□ -1.02
HSPG2-213ENST00000498495 FAM231DQ6ZW35 169 aa8.67□□□□□ -1.02
HSPG2-213ENST00000498495 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.67□□□□□ -1.02
HSPG2-213ENST00000498495 OR10G8Q8NGN5 311 aa8.67□□□□□ -1.02
HSPG2-213ENST00000498495 BIRC6Q9NR09 4857 aa8.67□□□□□ -1.02
HSPG2-213ENST00000498495 MGPP08493 103 aa8.66□□□□□ -1.02
HSPG2-213ENST00000498495 TRGC1P0CF51 173 aa8.66□□□□□ -1.02
HSPG2-213ENST00000498495 UBE2D3P61077 147 aa8.66□□□□□ -1.02
HSPG2-213ENST00000498495 UBE2D2P62837 147 aa8.66□□□□□ -1.02
HSPG2-213ENST00000498495 PEA15Q15121 130 aa8.66□□□□□ -1.02
HSPG2-213ENST00000498495 TWIST1Q15672 202 aa8.66□□□□□ -1.02
HSPG2-213ENST00000498495 NEXN-AS1Q8NBZ9 246 aa8.66□□□□□ -1.02
HSPG2-213ENST00000498495 A8MWL6 223 aa8.65□□□□□ -1.02
HSPG2-213ENST00000498495 IBA57-AS1B1ANH7 110 aa8.65□□□□□ -1.02
HSPG2-213ENST00000498495 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.02
HSPG2-213ENST00000498495 LINC01551Q86U37 167 aa8.65□□□□□ -1.02
HSPG2-213ENST00000498495 FAT2Q9NYQ8 4349 aa8.65□□□□□ -1.02
HSPG2-213ENST00000498495 H7C1H1 209 aa8.64□□□□□ -1.03
HSPG2-213ENST00000498495 CTRLP40313 264 aa8.64□□□□□ -1.03
HSPG2-213ENST00000498495 TMEM241Q24JQ0 296 aa8.64□□□□□ -1.03
HSPG2-213ENST00000498495 FAM74A3Q4VXF1 159 aa8.64□□□□□ -1.03
HSPG2-213ENST00000498495 GTSF1Q8WW33 167 aa8.64□□□□□ -1.03
HSPG2-213ENST00000498495 DPH3P1Q9H4G8 78 aa8.64□□□□□ -1.03
HSPG2-213ENST00000498495 SMDT1Q9H4I9 107 aa8.64□□□□□ -1.03
HSPG2-213ENST00000498495 URGCP-MRPS24S4R325 110 aa8.64□□□□□ -1.03
HSPG2-213ENST00000498495 EREGO14944 169 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms