RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 TCRBV3S1A0A5B6 114 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 CCDC153Q494R4 210 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 OR2T2Q6IF00 324 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 ATP6V0E2Q8NHE4 81 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 IFI27L1Q96BM0 104 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 VPS25Q9BRG1 176 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 PRR15LQ9BU68 103 aa0.03□□□□□ -2.4
RBM39-242ENST00000498280 LSM2Q9Y333 95 aaKnown RBP0.03□□□□□ -2.4
RBM39-242ENST00000498280 TRANK1O15050 2925 aa0.03□□□□□ -2.41
RBM39-242ENST00000498280 CCDC168Q8NDH2 2452 aa0.03□□□□□ -2.41
RBM39-242ENST00000498280 FAT3Q8TDW7 4589 aa0.03□□□□□ -2.41
RBM39-242ENST00000498280 SYNJ1O43426 1573 aa0.02□□□□□ -2.41
RBM39-242ENST00000498280 ANKRD11Q6UB99 2663 aaPredicted RBP0.02□□□□□ -2.41
RBM39-242ENST00000498280 ABCA4P78363 2273 aa0.02□□□□□ -2.41
RBM39-242ENST00000498280 HRNRQ86YZ3 2850 aaPredicted RBP0.02□□□□□ -2.41
RBM39-242ENST00000498280 BORCS7-ASMTA0A0B4J1R7 106 aa0.02□□□□□ -2.41
RBM39-242ENST00000498280 TRAV2A0A0B4J234 112 aa0.02□□□□□ -2.41
RBM39-242ENST00000498280 F2Z2F3 143 aa0.02□□□□□ -2.41
RBM39-242ENST00000498280 RBP4P02753 201 aa0.02□□□□□ -2.41
RBM39-242ENST00000498280 PPP1R1CQ8WVI7 109 aa0.02□□□□□ -2.41
RBM39-242ENST00000498280 MAGOHBQ96A72 148 aaKnown RBP0.02□□□□□ -2.41
RBM39-242ENST00000498280 PTPRMP28827 1452 aa0.02□□□□□ -2.41
RBM39-242ENST00000498280 MYO18BQ8IUG5 2567 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 TNS1Q9HBL0 1735 aaKnown RBP0.01□□□□□ -2.41
RBM39-242ENST00000498280 ZANQ9Y493 2812 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 OTOGQ6ZRI0 2925 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 NPC2P61916 151 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 ATP11AUNQ6ZP68 121 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 CYP2G1PQ6ZSU1 146 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 SOGA1O94964 1423 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 UHRF1BP1LA0JNW5 1464 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 MED13LQ71F56 2210 aa0.01□□□□□ -2.41
RBM39-242ENST00000498280 USP9XQ93008 2570 aaPredicted RBP0□□□□□ -2.41
RBM39-242ENST00000498280 A0A087WTM6 91 aa0□□□□□ -2.41
RBM39-242ENST00000498280 GVQW2A0A096LPI5 108 aaPredicted RBP0□□□□□ -2.41
RBM39-242ENST00000498280 MCRIP1C9JLW8 97 aa0□□□□□ -2.41
RBM39-242ENST00000498280 J3QLW9 94 aa0□□□□□ -2.41
RBM39-242ENST00000498280 ZNF292O60281 2723 aa0□□□□□ -2.41
RBM39-242ENST00000498280 YPEL1O60688 119 aa0□□□□□ -2.41
RBM39-242ENST00000498280 SPINK1P00995 79 aa0□□□□□ -2.41
RBM39-242ENST00000498280 DBIP07108 87 aaKnown RBP0□□□□□ -2.41
RBM39-242ENST00000498280 ZNF142P52746 1687 aaPredicted RBP0□□□□□ -2.41
RBM39-242ENST00000498280 ERCC6Q03468 1493 aa0□□□□□ -2.41
RBM39-242ENST00000498280 SPRR2GQ9BYE4 73 aa0□□□□□ -2.41
RBM39-242ENST00000498280 BPESC1Q9GZL8 116 aa0□□□□□ -2.41
RBM39-242ENST00000498280 SPANXA1Q9NS26 97 aa0□□□□□ -2.41
RBM39-242ENST00000498280 SPANXCQ9NY87 97 aa0□□□□□ -2.41
RBM39-242ENST00000498280 KIF13AQ9H1H9 1805 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 COL7A1Q02388 2944 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 NBEAL2Q6ZNJ1 2754 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 ANKRD30AQ9BXX3 1397 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 RBAKDNA6NC62 111 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 M0R129 80 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 M0R2P5 195 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 CCL3L1P16619 93 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 MORN2Q502X0 79 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 Q5BKY6 102 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 NDUFA11Q86Y39 141 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 C20orf197Q8N268 126 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 AIF1LQ9BQI0 150 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 ERG28Q9UKR5 140 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 DNHD1Q96M86 4753 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 ANK2Q01484 3957 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 CELSR2Q9HCU4 2923 aa-0.01□□□□□ -2.41
RBM39-242ENST00000498280 VIRMAQ69YN4 1812 aaKnown RBP-0.01□□□□□ -2.41
RBM39-242ENST00000498280 CDK13Q14004 1512 aaKnown RBP-0.02□□□□□ -2.41
RBM39-242ENST00000498280 F5P12259 2224 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 TRBV20-1A0A075B6N2 111 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 TRAV12-3A0A0B4J271 114 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 FAM236AA0A1B0GUQ0 79 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 FAM236BA0A1B0GV22 79 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 CCDC179H3BU77 68 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 SCGB1A1P11684 91 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 COX4I1P13073 169 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 NCS1P62166 190 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 DR1Q01658 176 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 AKAP14Q86UN6 197 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 C4orf33Q8N1A6 199 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 LRRK2Q5S007 2527 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 PLXNA1Q9UIW2 1896 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 DMBT1Q9UGM3 2413 aaPredicted RBP-0.02□□□□□ -2.41
RBM39-242ENST00000498280 F8P00451 2351 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 LAMA3Q16787 3333 aa-0.02□□□□□ -2.41
RBM39-242ENST00000498280 USP9YO00507 2555 aaPredicted RBP-0.02□□□□□ -2.41
RBM39-242ENST00000498280 CELSR1Q9NYQ6 3014 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 WDFY4Q6ZS81 3184 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 LRP1Q07954 4544 aaKnown RBP-0.03□□□□□ -2.41
RBM39-242ENST00000498280 MYO7AQ13402 2215 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 NMBP08949 121 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 IGLC6P0CF74 106 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 COX6A2Q02221 97 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 HIST1H1AQ02539 215 aaPredicted RBP-0.03□□□□□ -2.41
RBM39-242ENST00000498280 SSBP1Q04837 148 aaKnown RBP-0.03□□□□□ -2.41
RBM39-242ENST00000498280 SPCS2Q15005 226 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 LINC01545Q5VT33 79 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 MIC13Q5XKP0 118 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 SMIM11BQ8TCY0 68 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 COX7B2Q8TF08 81 aa-0.03□□□□□ -2.41
RBM39-242ENST00000498280 Q96NJ1 140 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 1762.5 ms