RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 MYO9BQ13459 2157 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 PTPRDP23468 1912 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 A6NIN4 97 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 H3BMM0 161 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 XCL1P47992 114 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 SMIM11AP58511 58 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 C9orf129Q5T035 196 aaKnown RBP4.86□□□□□ -1.63
NEB-216ENST00000497809 UBE2WQ96B02 151 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 SCGB3A1Q96QR1 104 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 XAGE1AQ9HD64 81 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 U3KQK5 164 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 A0A0C4DFX4 3053 aa4.86□□□□□ -1.63
NEB-216ENST00000497809 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 IGHV1-3A0A0C4DH29 117 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 IGHV3-64DA0A0J9YX35 117 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 LY6HO94772 140 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 FXYD7P58549 80 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 ESRGQ1W209 222 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 SDIM1Q6ZPB5 146 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 CCL4L1Q8NHW4 92 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
NEB-216ENST00000497809 GTF3C1Q12789 2109 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 PHRF1Q9P1Y6 1649 aaKnown RBP4.85□□□□□ -1.63
NEB-216ENST00000497809 A6NDX4 124 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 C19orf84I3L1E1 186 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 SH2D1AO60880 128 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 IGHV1-69P01742 117 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 CFC1P0CG37 223 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 SAA1P0DJI8 122 aaPredicted RBP4.85□□□□□ -1.63
NEB-216ENST00000497809 SSBP1Q04837 148 aaKnown RBP4.85□□□□□ -1.63
NEB-216ENST00000497809 LINC00269Q8N2A0 174 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 Q8N9W7 124 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 DYNLRB1Q9NP97 96 aa4.85□□□□□ -1.63
NEB-216ENST00000497809 ARFGEF1Q9Y6D6 1849 aa4.84□□□□□ -1.63
NEB-216ENST00000497809 USP32Q8NFA0 1604 aa4.84□□□□□ -1.63
NEB-216ENST00000497809 IGHV1-46P01743 117 aa4.84□□□□□ -1.63
NEB-216ENST00000497809 SUPT4H1P63272 117 aaKnown RBP4.84□□□□□ -1.63
NEB-216ENST00000497809 AFDNP55196 1824 aaKnown RBP4.84□□□□□ -1.63
NEB-216ENST00000497809 LOC107984156A0A0G2JMH3 177 aa4.84□□□□□ -1.64
NEB-216ENST00000497809 LEPROTL1O95214 131 aa4.84□□□□□ -1.64
NEB-216ENST00000497809 ARL17AQ8IVW1 177 aa4.84□□□□□ -1.64
NEB-216ENST00000497809 PTPRBP23467 1997 aa4.83□□□□□ -1.64
NEB-216ENST00000497809 C5P01031 1676 aa4.83□□□□□ -1.64
NEB-216ENST00000497809 TRAV3A0A0B4J244 114 aa4.83□□□□□ -1.64
NEB-216ENST00000497809 IQCF6A8MYZ5 107 aa4.83□□□□□ -1.64
NEB-216ENST00000497809 KLKP1Q107X0 134 aa4.83□□□□□ -1.64
NEB-216ENST00000497809 PFN4Q8NHR9 129 aa4.83□□□□□ -1.64
NEB-216ENST00000497809 LINC01560Q8TB33 94 aa4.83□□□□□ -1.64
NEB-216ENST00000497809 KIAA1549Q9HCM3 1950 aa4.83□□□□□ -1.64
NEB-216ENST00000497809 PKD1L3Q7Z443 1732 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 IGLV3-12A0A075B6K2 115 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 PIGBOS1A0A0B4J2F0 54 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 BCE1O60756 84 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 CRIP2P52943 208 aaPredicted RBP4.82□□□□□ -1.64
NEB-216ENST00000497809 SNRPGP62308 76 aaKnown RBP4.82□□□□□ -1.64
NEB-216ENST00000497809 FAM229BQ4G0N7 80 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 MIR7-3HGQ8N6C7 128 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 BPESC1Q9GZL8 116 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 TJP1Q07157 1748 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 TRBV7-1A0A0A6YYK4 115 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 A0A1B0GWA3 101 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 C17orf51A8MQB3 221 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 Q6ZTC4 211 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 NDUFA12Q9UI09 145 aa4.82□□□□□ -1.64
NEB-216ENST00000497809 SLX4Q8IY92 1834 aa4.81□□□□□ -1.64
NEB-216ENST00000497809 A0A0B4J2C4 111 aa4.81□□□□□ -1.64
NEB-216ENST00000497809 A8MUU9 505 aa4.81□□□□□ -1.64
NEB-216ENST00000497809 ZNF563Q8TA94 476 aa4.81□□□□□ -1.64
NEB-216ENST00000497809 SMCR5Q8TEV8 140 aa4.81□□□□□ -1.64
NEB-216ENST00000497809 UBR1Q8IWV7 1749 aa4.81□□□□□ -1.64
NEB-216ENST00000497809 COL3A1P02461 1466 aaPredicted RBP4.8□□□□□ -1.64
NEB-216ENST00000497809 CHD8Q9HCK8 2581 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 COL14A1Q05707 1796 aaKnown RBP4.8□□□□□ -1.64
NEB-216ENST00000497809 DOCK9Q9BZ29 2069 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 ZNF236Q9UL36 1845 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 GNRH2O43555 120 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 SLC48A1Q6P1K1 146 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 PROK2Q9HC23 129 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 ZNRD1Q9P1U0 126 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 ICOSQ9Y6W8 199 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 NYNRINQ9P2P1 1898 aaKnown RBP4.8□□□□□ -1.64
NEB-216ENST00000497809 NUP98P52948 1817 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 IGKV1OR2-108A0A075B7D4 117 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 TEX49A0A1B0GTD5 131 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
NEB-216ENST00000497809 LPAL2Q16609 132 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 MIAQ16674 131 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 ASB16-AS1Q495Z4 193 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 C20orf197Q8N268 126 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 C1orf64Q8NEQ6 169 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 IFI27L1Q96BM0 104 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 PIEZO1Q92508 2521 aa4.8□□□□□ -1.64
NEB-216ENST00000497809 DEFA4P12838 97 aa4.79□□□□□ -1.64
NEB-216ENST00000497809 SPTSSBQ8NFR3 76 aa4.79□□□□□ -1.64
NEB-216ENST00000497809 TYMSOSQ8TAI1 123 aa4.79□□□□□ -1.64
NEB-216ENST00000497809 DYNLRB2Q8TF09 96 aa4.79□□□□□ -1.64
NEB-216ENST00000497809 TMEM141Q96I45 108 aa4.79□□□□□ -1.64
NEB-216ENST00000497809 RETNLBQ9BQ08 111 aa4.79□□□□□ -1.64
NEB-216ENST00000497809 SLIT2O94813 1529 aa4.79□□□□□ -1.64
NEB-216ENST00000497809 C16orf90A8MZG2 172 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms