RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 SMIM17P0DL12 118 aa8.69□□□□□ -1.02
COL4A5-206ENST00000489230 GATA1P15976 413 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-206ENST00000489230 FOXA3P55318 350 aaPredicted RBP8.69□□□□□ -1.02
COL4A5-206ENST00000489230 RPL23P62829 140 aaKnown RBP8.69□□□□□ -1.02
COL4A5-206ENST00000489230 ADIRFQ15847 76 aa8.69□□□□□ -1.02
COL4A5-206ENST00000489230 VSIG2Q96IQ7 327 aa8.69□□□□□ -1.02
COL4A5-206ENST00000489230 GFRA4Q9GZZ7 299 aa8.69□□□□□ -1.02
COL4A5-206ENST00000489230 ICOSQ9Y6W8 199 aa8.69□□□□□ -1.02
COL4A5-206ENST00000489230 GZMBP10144 247 aa8.68□□□□□ -1.02
COL4A5-206ENST00000489230 PNRC1Q12796 327 aaPredicted RBP8.68□□□□□ -1.02
COL4A5-206ENST00000489230 RHOHQ15669 191 aa8.68□□□□□ -1.02
COL4A5-206ENST00000489230 LYZL1Q6UWQ5 148 aa8.68□□□□□ -1.02
COL4A5-206ENST00000489230 OR10G8Q8NGN5 311 aa8.68□□□□□ -1.02
COL4A5-206ENST00000489230 OR10AG1Q8NH19 301 aa8.68□□□□□ -1.02
COL4A5-206ENST00000489230 ISOC2Q96AB3 205 aa8.68□□□□□ -1.02
COL4A5-206ENST00000489230 BORCS7Q96B45 105 aa8.68□□□□□ -1.02
COL4A5-206ENST00000489230 MUC4Q99102 2169 aa8.68□□□□□ -1.02
COL4A5-206ENST00000489230 CRYGDP07320 174 aa8.67□□□□□ -1.02
COL4A5-206ENST00000489230 TRGC1P0CF51 173 aa8.67□□□□□ -1.02
COL4A5-206ENST00000489230 RAB4BP61018 213 aa8.67□□□□□ -1.02
COL4A5-206ENST00000489230 SMIM15Q7Z3B0 74 aa8.67□□□□□ -1.02
COL4A5-206ENST00000489230 UBE2DNLQ8IWF7 75 aa8.67□□□□□ -1.02
COL4A5-206ENST00000489230 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
COL4A5-206ENST00000489230 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
COL4A5-206ENST00000489230 HERC2O95714 4834 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 A0A096LPF7 62 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 IGHV3-73A0A0B4J1V6 119 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 LINC00862A6NCI5 91 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 PPP1R2P9O14990 202 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 GYPEP15421 78 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 NTF3P20783 257 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 SRIP30626 198 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 UFSP1Q6NVU6 142 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 NEGR1Q7Z3B1 354 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 AP1S3Q96PC3 154 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 JPT2Q9H910 190 aa8.66□□□□□ -1.02
COL4A5-206ENST00000489230 A0A087WWL8 130 aa8.65□□□□□ -1.02
COL4A5-206ENST00000489230 TMEM218A2RU14 115 aa8.65□□□□□ -1.02
COL4A5-206ENST00000489230 K7EQD1 137 aa8.65□□□□□ -1.02
COL4A5-206ENST00000489230 CTRLP40313 264 aa8.65□□□□□ -1.02
COL4A5-206ENST00000489230 SSTP61278 116 aa8.65□□□□□ -1.02
COL4A5-206ENST00000489230 TWIST1Q15672 202 aa8.65□□□□□ -1.02
COL4A5-206ENST00000489230 FAM74A4Q5TZK3 123 aa8.65□□□□□ -1.02
COL4A5-206ENST00000489230 SAMD10Q9BYL1 202 aa8.65□□□□□ -1.02
COL4A5-206ENST00000489230 KMT2AQ03164 3969 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 MUC21A0A0G2JKD1 596 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 TRBV10-1A0A0K0K1A3 114 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 MUC21A0A140T8X8 626 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 F5H697 171 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 MT-ND4LP03901 98 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 COMMD7Q86VX2 200 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 C14orf178Q8N769 122 aaPredicted RBP8.64□□□□□ -1.03
COL4A5-206ENST00000489230 GTSF1Q8WW33 167 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 V9GYV3 84 aa8.64□□□□□ -1.03
COL4A5-206ENST00000489230 HIGD1CA8MV81 97 aa8.63□□□□□ -1.03
COL4A5-206ENST00000489230 F8W036 122 aa8.63□□□□□ -1.03
COL4A5-206ENST00000489230 H7C1H1 209 aa8.63□□□□□ -1.03
COL4A5-206ENST00000489230 ESRGQ1W209 222 aa8.63□□□□□ -1.03
COL4A5-206ENST00000489230 LYPD5Q6UWN5 251 aa8.63□□□□□ -1.03
COL4A5-206ENST00000489230 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-206ENST00000489230 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
COL4A5-206ENST00000489230 PGLYRP4Q96LB8 373 aa8.63□□□□□ -1.03
COL4A5-206ENST00000489230 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
COL4A5-206ENST00000489230 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 TIRAPP58753 221 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 RIGQ13278 110 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 ZNF56Q15929 161 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 Q6ZSN1 163 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 SEC11CQ9BY50 192 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 DPH3P1Q9H4G8 78 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 KIF25-AS1Q9Y6Z4 181 aa8.62□□□□□ -1.03
COL4A5-206ENST00000489230 A0A1B0GW15 77 aa8.61□□□□□ -1.03
COL4A5-206ENST00000489230 SMIM27A0A1W2PRY6 76 aa8.61□□□□□ -1.03
COL4A5-206ENST00000489230 RPL36AP83881 106 aaKnown RBP8.61□□□□□ -1.03
COL4A5-206ENST00000489230 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
COL4A5-206ENST00000489230 FRZBQ92765 325 aa8.61□□□□□ -1.03
COL4A5-206ENST00000489230 RPL36ALQ969Q0 106 aaKnown RBP8.61□□□□□ -1.03
COL4A5-206ENST00000489230 UPK3BQ9BT76 320 aa8.61□□□□□ -1.03
COL4A5-206ENST00000489230 MSRB1Q9NZV6 116 aa8.61□□□□□ -1.03
COL4A5-206ENST00000489230 MRPS16Q9Y3D3 137 aaKnown RBP8.61□□□□□ -1.03
COL4A5-206ENST00000489230 TRBV7-3A0A075B6L6 115 aa8.6□□□□□ -1.03
COL4A5-206ENST00000489230 EVI2AP22794 236 aa8.6□□□□□ -1.03
COL4A5-206ENST00000489230 NUP35Q8NFH5 326 aa8.6□□□□□ -1.03
COL4A5-206ENST00000489230 DNAJC30Q96LL9 226 aa8.6□□□□□ -1.03
COL4A5-206ENST00000489230 GTSF1LQ9H1H1 148 aa8.6□□□□□ -1.03
COL4A5-206ENST00000489230 Q9H8V8 135 aa8.6□□□□□ -1.03
COL4A5-206ENST00000489230 A0A087WWC5 75 aa8.59□□□□□ -1.03
COL4A5-206ENST00000489230 GAGE12JA6NER3 117 aa8.59□□□□□ -1.03
COL4A5-206ENST00000489230 S100A8P05109 93 aa8.59□□□□□ -1.03
COL4A5-206ENST00000489230 LINC00315P59091 139 aa8.59□□□□□ -1.03
COL4A5-206ENST00000489230 GAGE1Q13065 139 aa8.59□□□□□ -1.03
COL4A5-206ENST00000489230 GAGE4Q13068 117 aa8.59□□□□□ -1.03
COL4A5-206ENST00000489230 GAGE5Q13069 117 aa8.59□□□□□ -1.03
COL4A5-206ENST00000489230 GAGE13Q4V321 117 aa8.59□□□□□ -1.03
COL4A5-206ENST00000489230 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
COL4A5-206ENST00000489230 HECTD4Q9Y4D8 3996 aa8.58□□□□□ -1.04
COL4A5-206ENST00000489230 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
COL4A5-206ENST00000489230 TRAV8-6A0A0B4J262 113 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms