RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 FAM25CB3EWG5 89 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 FAM25GB3EWG6 89 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 FNDC10F2Z333 226 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 F6UZH7 168 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 SLC25A6P12236 298 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 RAB5CP51148 216 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 LSM3P62310 102 aaKnown RBP3.18□□□□□ -1.9
PTPN4-210ENST00000485247 ZFP2Q6ZN57 461 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 LINC00269Q8N2A0 174 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 C12orf45Q8N5I9 185 aaPredicted RBP3.18□□□□□ -1.9
PTPN4-210ENST00000485247 OR10G7Q8NGN6 311 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 OR1L4Q8NGR5 311 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 KCNS1Q96KK3 526 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 CNBD2Q96M20 576 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 GFRA4Q9GZZ7 299 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 TMEM14CQ9P0S9 112 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 RABL2BQ9UNT1 228 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 IGLV1-50A0A075B6I6 118 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 TRAV1-1A0A0B4J248 108 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 DUXBA0A1W2PPF3 345 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 FAM24AA6NFZ4 105 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 SSSCA1O60232 199 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 RPS10P46783 165 aaKnown RBP3.17□□□□□ -1.9
PTPN4-210ENST00000485247 CSN1S1P47710 185 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 CAMLGP49069 296 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 UBE2D1P51668 147 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 LGALSLQ3ZCW2 172 aaPredicted RBP3.17□□□□□ -1.9
PTPN4-210ENST00000485247 NRARPQ7Z6K4 114 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 C9orf85Q96MD7 179 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 PFDN5Q99471 154 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 JPT2Q9H910 190 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 PRR34Q9NV39 138 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 LENEPQ9Y5L5 61 aa3.17□□□□□ -1.9
PTPN4-210ENST00000485247 TRBV6-8A0A0A6YYG3 113 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 PIGBOS1A0A0B4J2F0 54 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 RBAKDNA6NC62 111 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 A8MWV9 139 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 PTTG1O95997 202 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 MT-ND6P03923 174 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 NBEAP1P0C6P0 100 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 GABARAPL2P60520 117 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 RANP62826 216 aaKnown RBP3.16□□□□□ -1.9
PTPN4-210ENST00000485247 RPL24P83731 157 aaKnown RBP3.16□□□□□ -1.9
PTPN4-210ENST00000485247 PNRC1Q12796 327 aaPredicted RBP3.16□□□□□ -1.9
PTPN4-210ENST00000485247 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 TMEM14EPQ6UXP3 125 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 CLVS1Q8IUQ0 354 aaPredicted RBP3.16□□□□□ -1.9
PTPN4-210ENST00000485247 FER1L6-AS1Q8NA97 138 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 DIRC1Q969H9 104 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 PHYHIPLQ96FC7 376 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 SMIM8Q96KF7 97 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 SCGB3A2Q96PL1 93 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 PRRT1Q99946 306 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 SLC25A2Q9BXI2 301 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 LINC00474Q9P2X8 69 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 EXTL2Q9UBQ6 330 aa3.16□□□□□ -1.9
PTPN4-210ENST00000485247 TSC22D2O75157 780 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 AKAIN1P0CW23 69 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 RNASE3P12724 160 aaKnown RBP3.15□□□□□ -1.91
PTPN4-210ENST00000485247 UBE2D3P61077 147 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 UBE2D2P62837 147 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 RBX1P62877 108 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 REG3AQ06141 175 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 NEDD8Q15843 81 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 HIGD2BQ4VC39 106 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 FAM74A4Q5TZK3 123 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 UFSP1Q6NVU6 142 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 ARL6IP6Q8N6S5 226 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 SUN5Q8TC36 379 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 DYNC2LI1Q8TCX1 351 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 PTH2Q96A98 100 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 TVP23CQ96ET8 276 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 HYLS1Q96M11 299 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 BCL7BQ9BQE9 202 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 TREM1Q9NP99 234 aa3.15□□□□□ -1.91
PTPN4-210ENST00000485247 RABL2AQ9UBK7 228 aaPredicted RBP3.15□□□□□ -1.91
PTPN4-210ENST00000485247 TRBV7-3A0A075B6L6 115 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 H0Y9J4 135 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 KRTAP1-4P0C5Y4 121 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 CRYGAP11844 174 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 RPL13AP40429 203 aaKnown RBP3.14□□□□□ -1.91
PTPN4-210ENST00000485247 S100A10P60903 97 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 SSBP1Q04837 148 aaKnown RBP3.14□□□□□ -1.91
PTPN4-210ENST00000485247 GAGE6Q13070 117 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 TMEM128Q5BJH2 165 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 GCSAMLQ5JQS6 135 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 FXYD5Q96DB9 178 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 DIRAS2Q96HU8 199 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 FAM167A-AS1Q96KT0 104 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 RETNLBQ9BQ08 111 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 GGACTQ9BVM4 153 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 NMES1Q9C002 83 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 MCUBQ9NWR8 336 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 SCP2D1Q9UJQ7 156 aa3.14□□□□□ -1.91
PTPN4-210ENST00000485247 TRAV8-4A0A0B4J246 113 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 P01737 135 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 IGLV7-43P04211 117 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms