RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 C19orf71A6NCJ1 209 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 TMEM250H0YL14 139 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 SNAI2O43623 268 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 OR5AL1P0C617 328 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 GAGE1Q13065 139 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 GAGE4Q13068 117 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 GAGE5Q13069 117 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 GAGE13Q4V321 117 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 WFDC10BQ8IUB3 73 aa13.1□□□□□ -0.31
SNX17-206ENST00000484886 C14orf178Q8N769 122 aaPredicted RBP13.1□□□□□ -0.31
SNX17-206ENST00000484886 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
SNX17-206ENST00000484886 ATP6V0E2Q8NHE4 81 aa13.09□□□□□ -0.31
SNX17-206ENST00000484886 LY96Q9Y6Y9 160 aa13.09□□□□□ -0.31
SNX17-206ENST00000484886 CRYGDP07320 174 aa13.08□□□□□ -0.32
SNX17-206ENST00000484886 ZNF56Q15929 161 aa13.08□□□□□ -0.32
SNX17-206ENST00000484886 OR10J3Q5JRS4 329 aa13.08□□□□□ -0.32
SNX17-206ENST00000484886 FAM210AQ96ND0 272 aa13.08□□□□□ -0.32
SNX17-206ENST00000484886 SSBP4Q9BWG4 385 aaPredicted RBP13.08□□□□□ -0.32
SNX17-206ENST00000484886 DNAH2Q9P225 4427 aa13.08□□□□□ -0.32
SNX17-206ENST00000484886 TRAV9-2A0A087WT02 112 aa13.07□□□□□ -0.32
SNX17-206ENST00000484886 TRAV8-6A0A0B4J262 113 aa13.07□□□□□ -0.32
SNX17-206ENST00000484886 TIRAPP58753 221 aa13.07□□□□□ -0.32
SNX17-206ENST00000484886 OCC1Q8TAD7 63 aa13.07□□□□□ -0.32
SNX17-206ENST00000484886 GTSF1LQ9H1H1 148 aa13.07□□□□□ -0.32
SNX17-206ENST00000484886 SMIM17P0DL12 118 aa13.06□□□□□ -0.32
SNX17-206ENST00000484886 EVI2AP22794 236 aa13.06□□□□□ -0.32
SNX17-206ENST00000484886 TEX261Q6UWH6 196 aa13.06□□□□□ -0.32
SNX17-206ENST00000484886 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
SNX17-206ENST00000484886 NUDT11Q96G61 164 aa13.06□□□□□ -0.32
SNX17-206ENST00000484886 RNASE7Q9H1E1 156 aaKnown RBP13.06□□□□□ -0.32
SNX17-206ENST00000484886 BIRC6Q9NR09 4857 aa13.06□□□□□ -0.32
SNX17-206ENST00000484886 F5H697 171 aa13.05□□□□□ -0.32
SNX17-206ENST00000484886 K7EN84 100 aa13.05□□□□□ -0.32
SNX17-206ENST00000484886 AP1S3Q96PC3 154 aa13.05□□□□□ -0.32
SNX17-206ENST00000484886 SMIM7Q9BQ49 75 aa13.05□□□□□ -0.32
SNX17-206ENST00000484886 RPP21Q9H633 154 aaKnown RBP13.05□□□□□ -0.32
SNX17-206ENST00000484886 IGLC6P0CF74 106 aa13.04□□□□□ -0.32
SNX17-206ENST00000484886 LINC00315P59091 139 aa13.04□□□□□ -0.32
SNX17-206ENST00000484886 CACNG7P62955 275 aa13.04□□□□□ -0.32
SNX17-206ENST00000484886 LELP1Q5T871 98 aa13.04□□□□□ -0.32
SNX17-206ENST00000484886 Q9UF83 564 aa13.04□□□□□ -0.32
SNX17-206ENST00000484886 A0A1B0GVY2 172 aa13.03□□□□□ -0.32
SNX17-206ENST00000484886 RAB4BP61018 213 aa13.03□□□□□ -0.32
SNX17-206ENST00000484886 TNP2Q05952 138 aa13.03□□□□□ -0.32
SNX17-206ENST00000484886 DNAH17Q9UFH2 4485 aa13.02□□□□□ -0.33
SNX17-206ENST00000484886 IGHV3-38A0A0C4DH36 116 aa13.02□□□□□ -0.33
SNX17-206ENST00000484886 F2Z2F3 143 aa13.02□□□□□ -0.33
SNX17-206ENST00000484886 DNAH10OSP0CZ25 163 aa13.02□□□□□ -0.33
SNX17-206ENST00000484886 LINC00694P0DN24 101 aa13.02□□□□□ -0.33
SNX17-206ENST00000484886 BTF3P20290 206 aaKnown RBP13.02□□□□□ -0.33
SNX17-206ENST00000484886 RPL36AP83881 106 aaKnown RBP13.02□□□□□ -0.33
SNX17-206ENST00000484886 LYZL1Q6UWQ5 148 aa13.02□□□□□ -0.33
SNX17-206ENST00000484886 RPL36ALQ969Q0 106 aaKnown RBP13.02□□□□□ -0.33
SNX17-206ENST00000484886 HECTD4Q9Y4D8 3996 aa13.01□□□□□ -0.33
SNX17-206ENST00000484886 TRBV10-1A0A0K0K1A3 114 aa13.01□□□□□ -0.33
SNX17-206ENST00000484886 ZNF727A8MUV8 499 aa13.01□□□□□ -0.33
SNX17-206ENST00000484886 GATCO43716 136 aaKnown RBP13.01□□□□□ -0.33
SNX17-206ENST00000484886 MGPP08493 103 aa13.01□□□□□ -0.33
SNX17-206ENST00000484886 SRP19P09132 144 aaKnown RBP13.01□□□□□ -0.33
SNX17-206ENST00000484886 C10orf126Q8N4M7 172 aa13.01□□□□□ -0.33
SNX17-206ENST00000484886 FAT2Q9NYQ8 4349 aa13□□□□□ -0.33
SNX17-206ENST00000484886 K7EP13 123 aa13□□□□□ -0.33
SNX17-206ENST00000484886 NDUFS6O75380 124 aaKnown RBP13□□□□□ -0.33
SNX17-206ENST00000484886 MSRB1Q9NZV6 116 aa13□□□□□ -0.33
SNX17-206ENST00000484886 A0A087WWC5 75 aa12.99□□□□□ -0.33
SNX17-206ENST00000484886 IGHV3-30P01768 117 aa12.99□□□□□ -0.33
SNX17-206ENST00000484886 IGHV3-33P01772 117 aa12.99□□□□□ -0.33
SNX17-206ENST00000484886 IGHV3-30-3P0DP02 117 aa12.99□□□□□ -0.33
SNX17-206ENST00000484886 IGHV3-30-5P0DP03 117 aa12.99□□□□□ -0.33
SNX17-206ENST00000484886 ERVFC1-1P60608 527 aa12.99□□□□□ -0.33
SNX17-206ENST00000484886 TRBV7-3A0A075B6L6 115 aa12.98□□□□□ -0.33
SNX17-206ENST00000484886 TRGC1P0CF51 173 aa12.98□□□□□ -0.33
SNX17-206ENST00000484886 LINC01556Q5JQF7 62 aa12.98□□□□□ -0.33
SNX17-206ENST00000484886 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
SNX17-206ENST00000484886 TNFRSF18Q9Y5U5 241 aa12.98□□□□□ -0.33
SNX17-206ENST00000484886 NTF3P20783 257 aa12.97□□□□□ -0.33
SNX17-206ENST00000484886 CTRLP40313 264 aa12.97□□□□□ -0.33
SNX17-206ENST00000484886 PEA15Q15121 130 aa12.97□□□□□ -0.33
SNX17-206ENST00000484886 NEXN-AS1Q8NBZ9 246 aa12.97□□□□□ -0.33
SNX17-206ENST00000484886 UBE2D3P61077 147 aa12.96□□□□□ -0.33
SNX17-206ENST00000484886 UBE2D2P62837 147 aa12.96□□□□□ -0.33
SNX17-206ENST00000484886 TWIST1Q15672 202 aa12.96□□□□□ -0.33
SNX17-206ENST00000484886 FAM231DQ6ZW35 169 aa12.96□□□□□ -0.33
SNX17-206ENST00000484886 LINC01551Q86U37 167 aa12.96□□□□□ -0.33
SNX17-206ENST00000484886 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.33
SNX17-206ENST00000484886 KIF25-AS1Q9Y6Z4 181 aa12.96□□□□□ -0.33
SNX17-206ENST00000484886 A8MWL6 223 aa12.95□□□□□ -0.34
SNX17-206ENST00000484886 OR10G8Q8NGN5 311 aa12.95□□□□□ -0.34
SNX17-206ENST00000484886 H7C1H1 209 aa12.94□□□□□ -0.34
SNX17-206ENST00000484886 FAM74A3Q4VXF1 159 aa12.94□□□□□ -0.34
SNX17-206ENST00000484886 WDR73Q6P4I2 378 aa12.94□□□□□ -0.34
SNX17-206ENST00000484886 GTSF1Q8WW33 167 aa12.94□□□□□ -0.34
SNX17-206ENST00000484886 DPH3P1Q9H4G8 78 aa12.94□□□□□ -0.34
SNX17-206ENST00000484886 URGCP-MRPS24S4R325 110 aa12.94□□□□□ -0.34
SNX17-206ENST00000484886 SRSF3P84103 164 aaKnown RBP12.93□□□□□ -0.34
SNX17-206ENST00000484886 TMEM241Q24JQ0 296 aa12.93□□□□□ -0.34
SNX17-206ENST00000484886 Q6ZRN7 208 aaPredicted RBP12.93□□□□□ -0.34
SNX17-206ENST00000484886 C15orf54Q8N8G6 183 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms