RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 SPTBN2O15020 2390 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 TNXBP22105 4242 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 TRBV7-1A0A0A6YYK4 115 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 BORCS7-ASMTA0A0B4J1R7 106 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 CCDC179H3BU77 68 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 RBP4P02753 201 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 ACYP2P14621 99 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 CCL3L1P16619 93 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 TMEM128Q5BJH2 165 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 OR2T2Q6IF00 324 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 PPP1R2P3Q6NXS1 205 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 TMEM91Q6ZNR0 172 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 SNX29P2Q8IUI4 249 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 OR8I2Q8N0Y5 310 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 C4orf33Q8N1A6 199 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 TMEM35BQ8NCS4 154 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 DYNLRB2Q8TF09 96 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 SKA2Q8WVK7 121 aaPredicted RBP-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 MAGOHBQ96A72 148 aaKnown RBP-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 CALML5Q9NZT1 146 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 SCP2D1Q9UJQ7 156 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 NOP16Q9Y3C1 178 aaKnown RBP-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 KIAA0100Q14667 2235 aaKnown RBP-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 GOLGA3Q08378 1498 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 CHD6Q8TD26 2715 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 FAM208BQ5VWN6 2430 aa-0.17□□□□□ -2.44
ERCC8-206ENST00000484330 AKAP6Q13023 2319 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 VWFP04275 2813 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 FAT2Q9NYQ8 4349 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 TRAV36DV7A0A075B6V5 113 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 A0A1B0GX51 115 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 TMEM14DPA8MWL7 114 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 J3QLW9 94 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 DEGS1O15121 323 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 SMIM24O75264 130 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 CFDP00746 253 aaPredicted RBP-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 TFF1P04155 84 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 PAEPP09466 180 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 SCTP09683 121 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 SLC25A6P12236 298 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 HLA-DRB4P13762 266 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 SPRR2DP22532 72 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 S100GP29377 79 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 GCHFRP30047 84 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 RPS28P62857 69 aaKnown RBP-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 INSL4Q14641 139 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 ATP11AUNQ6ZP68 121 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 Q6ZRX8 168 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 COX7B2Q8TF08 81 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 IFI27L1Q96BM0 104 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 Q96NJ1 140 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 DDA1Q9BW61 102 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 CNFNQ9BYD5 112 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 CYP4F30PQ9H0H9 118 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 BANF2Q9H503 90 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 BATF3Q9NR55 127 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 DNAJC15Q9Y5T4 150 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 V9GYV3 84 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 HLA-DRB4X5D2U9 266 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 MYH9P35579 1960 aaKnown RBP-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 ARFGEF1Q9Y6D6 1849 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 TENM2Q9NT68 2774 aa-0.18□□□□□ -2.44
ERCC8-206ENST00000484330 PTPRQQ9UMZ3 2332 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 PDZD2O15018 2839 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 TRAV12-3A0A0B4J271 114 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 TSTD3H0UI37 97 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 M0R2P5 195 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 FABP1P07148 127 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 NPC2P61916 151 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 WFDC2Q14508 124 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 SPCS2Q15005 226 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 SMIM15Q7Z3B0 74 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 UBE2DNLQ8IWF7 75 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 TCTE3Q8IZS6 198 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 C20orf197Q8N268 126 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 SPANXCQ9NY87 97 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 PRO0255Q9UI72 69 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 DOCK11Q5JSL3 2073 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 IFT172Q9UG01 1749 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 COL6A3P12111 3177 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 C2CD3Q4AC94 2353 aa-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 MUC22E2RYF6 1773 aaPredicted RBP-0.19□□□□□ -2.44
ERCC8-206ENST00000484330 MUC12Q9UKN1 5478 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 LRRC37A3O60309 1634 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 PKDREJQ9NTG1 2253 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 SRRM2Q9UQ35 2752 aaKnown RBP-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 PRKDCP78527 4128 aaKnown RBP-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 PPRC1Q5VV67 1664 aaKnown RBP-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 ERCC6Q03468 1493 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 TRGV1A0A0A0MS02 117 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 A0A0D9SFI3 127 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 TRBV10-3A0A0K0K1G6 114 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 ZNF815PA8K554 130 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 M0R3E3 92 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 PIN1P1O15428 100 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 TNFSF15O95150 251 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 MT-ND4LP03901 98 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 SPINK8P0C7L1 97 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 DEFB109BQ30KR1 87 aa-0.2□□□□□ -2.44
ERCC8-206ENST00000484330 CCDC153Q494R4 210 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms