RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 SAMD10Q9BYL1 202 aa11.22□□□□□ -0.61
COL2A1-206ENST00000483376 RPP21Q9H633 154 aaKnown RBP11.22□□□□□ -0.61
COL2A1-206ENST00000483376 JPT2Q9H910 190 aa11.22□□□□□ -0.61
COL2A1-206ENST00000483376 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
COL2A1-206ENST00000483376 RAB14P61106 215 aa11.21□□□□□ -0.61
COL2A1-206ENST00000483376 SPANXN1Q5VSR9 72 aa11.21□□□□□ -0.61
COL2A1-206ENST00000483376 CNFNQ9BYD5 112 aa11.21□□□□□ -0.61
COL2A1-206ENST00000483376 IGHV3-73A0A0B4J1V6 119 aa11.2□□□□□ -0.62
COL2A1-206ENST00000483376 LINC00694P0DN24 101 aa11.2□□□□□ -0.62
COL2A1-206ENST00000483376 CTRLP40313 264 aa11.2□□□□□ -0.62
COL2A1-206ENST00000483376 CEBPGP53567 150 aa11.2□□□□□ -0.62
COL2A1-206ENST00000483376 CACNG7P62955 275 aa11.2□□□□□ -0.62
COL2A1-206ENST00000483376 LYPD5Q6UWN5 251 aa11.2□□□□□ -0.62
COL2A1-206ENST00000483376 Q6ZSN1 163 aa11.2□□□□□ -0.62
COL2A1-206ENST00000483376 RNASE7Q9H1E1 156 aaKnown RBP11.2□□□□□ -0.62
COL2A1-206ENST00000483376 C9JQL5 133 aa11.19□□□□□ -0.62
COL2A1-206ENST00000483376 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
COL2A1-206ENST00000483376 Q9H8V8 135 aa11.19□□□□□ -0.62
COL2A1-206ENST00000483376 FAT2Q9NYQ8 4349 aa11.18□□□□□ -0.62
COL2A1-206ENST00000483376 TRBV10-1A0A0K0K1A3 114 aa11.18□□□□□ -0.62
COL2A1-206ENST00000483376 LOC100131303A0A0U1RQF7 123 aa11.18□□□□□ -0.62
COL2A1-206ENST00000483376 GZMBP10144 247 aa11.18□□□□□ -0.62
COL2A1-206ENST00000483376 SRSF3P84103 164 aaKnown RBP11.18□□□□□ -0.62
COL2A1-206ENST00000483376 AP1S3Q96PC3 154 aa11.18□□□□□ -0.62
COL2A1-206ENST00000483376 A0A087WWL8 130 aa11.17□□□□□ -0.62
COL2A1-206ENST00000483376 NBDYA0A0U1RRE5 68 aa11.17□□□□□ -0.62
COL2A1-206ENST00000483376 BTF3P20290 206 aaKnown RBP11.17□□□□□ -0.62
COL2A1-206ENST00000483376 FOXA3P55318 350 aaPredicted RBP11.17□□□□□ -0.62
COL2A1-206ENST00000483376 RAB4BP61018 213 aa11.17□□□□□ -0.62
COL2A1-206ENST00000483376 TMEM241Q24JQ0 296 aa11.17□□□□□ -0.62
COL2A1-206ENST00000483376 TTC32Q5I0X7 151 aa11.17□□□□□ -0.62
COL2A1-206ENST00000483376 FAM74A4Q5TZK3 123 aa11.17□□□□□ -0.62
COL2A1-206ENST00000483376 OSTCQ9NRP0 149 aa11.17□□□□□ -0.62
COL2A1-206ENST00000483376 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
COL2A1-206ENST00000483376 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
COL2A1-206ENST00000483376 A8MWL6 223 aa11.16□□□□□ -0.62
COL2A1-206ENST00000483376 GATCO43716 136 aaKnown RBP11.16□□□□□ -0.62
COL2A1-206ENST00000483376 ERVFC1-1P60608 527 aa11.16□□□□□ -0.62
COL2A1-206ENST00000483376 IFITM2Q01629 132 aa11.16□□□□□ -0.62
COL2A1-206ENST00000483376 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
COL2A1-206ENST00000483376 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
COL2A1-206ENST00000483376 NAT8Q9UHE5 227 aa11.16□□□□□ -0.62
COL2A1-206ENST00000483376 DNAH17Q9UFH2 4485 aa11.16□□□□□ -0.62
COL2A1-206ENST00000483376 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
COL2A1-206ENST00000483376 K7EP13 123 aa11.15□□□□□ -0.62
COL2A1-206ENST00000483376 LINC00315P59091 139 aa11.15□□□□□ -0.62
COL2A1-206ENST00000483376 OR10G8Q8NGN5 311 aa11.15□□□□□ -0.62
COL2A1-206ENST00000483376 ISOC2Q96AB3 205 aa11.15□□□□□ -0.62
COL2A1-206ENST00000483376 TPPP3Q9BW30 176 aa11.15□□□□□ -0.62
COL2A1-206ENST00000483376 GFRA4Q9GZZ7 299 aa11.15□□□□□ -0.62
COL2A1-206ENST00000483376 SIVA1O15304 175 aa11.14□□□□□ -0.63
COL2A1-206ENST00000483376 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
COL2A1-206ENST00000483376 RPL23P62829 140 aaKnown RBP11.14□□□□□ -0.63
COL2A1-206ENST00000483376 SOHLH1Q5JUK2 328 aa11.14□□□□□ -0.63
COL2A1-206ENST00000483376 ATP6V0E2Q8NHE4 81 aa11.14□□□□□ -0.63
COL2A1-206ENST00000483376 GTSF1Q8WW33 167 aa11.14□□□□□ -0.63
COL2A1-206ENST00000483376 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
COL2A1-206ENST00000483376 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
COL2A1-206ENST00000483376 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
COL2A1-206ENST00000483376 SMIM17P0DL12 118 aa11.13□□□□□ -0.63
COL2A1-206ENST00000483376 LINC00336Q6ZUF6 198 aa11.13□□□□□ -0.63
COL2A1-206ENST00000483376 TSKUQ8WUA8 353 aa11.13□□□□□ -0.63
COL2A1-206ENST00000483376 EPPK1P58107 5090 aaKnown RBP11.12□□□□□ -0.63
COL2A1-206ENST00000483376 HECTD4Q9Y4D8 3996 aa11.12□□□□□ -0.63
COL2A1-206ENST00000483376 M0R2N4 97 aa11.12□□□□□ -0.63
COL2A1-206ENST00000483376 NTF3P20783 257 aa11.12□□□□□ -0.63
COL2A1-206ENST00000483376 LELP1Q5T871 98 aa11.12□□□□□ -0.63
COL2A1-206ENST00000483376 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
COL2A1-206ENST00000483376 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
COL2A1-206ENST00000483376 V9GYV3 84 aa11.12□□□□□ -0.63
COL2A1-206ENST00000483376 TRBV7-3A0A075B6L6 115 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 GAGE12JA6NER3 117 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 DNAH10OSP0CZ25 163 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 RPL36AP83881 106 aaKnown RBP11.11□□□□□ -0.63
COL2A1-206ENST00000483376 GAGE1Q13065 139 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 GAGE4Q13068 117 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 GAGE5Q13069 117 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 ZNF56Q15929 161 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 GAGE13Q4V321 117 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 RPL36ALQ969Q0 106 aaKnown RBP11.11□□□□□ -0.63
COL2A1-206ENST00000483376 Q9UF83 564 aa11.11□□□□□ -0.63
COL2A1-206ENST00000483376 A0A087WWC5 75 aa11.1□□□□□ -0.63
COL2A1-206ENST00000483376 RTL8CO15255 209 aa11.1□□□□□ -0.63
COL2A1-206ENST00000483376 UBE2D3P61077 147 aa11.1□□□□□ -0.63
COL2A1-206ENST00000483376 UBE2D2P62837 147 aa11.1□□□□□ -0.63
COL2A1-206ENST00000483376 C1orf134Q5TEV5 83 aa11.1□□□□□ -0.63
COL2A1-206ENST00000483376 KRTAP1-5Q9BYS1 174 aa11.1□□□□□ -0.63
COL2A1-206ENST00000483376 DPH3P1Q9H4G8 78 aa11.1□□□□□ -0.63
COL2A1-206ENST00000483376 H7C1H1 209 aa11.09□□□□□ -0.63
COL2A1-206ENST00000483376 EVI2AP22794 236 aa11.09□□□□□ -0.63
COL2A1-206ENST00000483376 ADIRFQ15847 76 aa11.09□□□□□ -0.63
COL2A1-206ENST00000483376 UQCC3Q6UW78 93 aa11.09□□□□□ -0.63
COL2A1-206ENST00000483376 TRAV9-2A0A087WT02 112 aa11.08□□□□□ -0.64
COL2A1-206ENST00000483376 TRAV8-6A0A0B4J262 113 aa11.08□□□□□ -0.64
COL2A1-206ENST00000483376 HIGD1CA8MV81 97 aa11.08□□□□□ -0.64
COL2A1-206ENST00000483376 M0QY20 66 aa11.08□□□□□ -0.64
COL2A1-206ENST00000483376 SSTP61278 116 aa11.08□□□□□ -0.64
COL2A1-206ENST00000483376 PNRC1Q12796 327 aaPredicted RBP11.08□□□□□ -0.64
COL2A1-206ENST00000483376 TWIST1Q15672 202 aa11.08□□□□□ -0.64
COL2A1-206ENST00000483376 LINC01556Q5JQF7 62 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 236.1 ms