RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 ABCA2Q9BZC7 2435 aa-0.25□□□□□ -2.45
PMS1-219ENST00000483293 A0A087WTM6 91 aa-0.25□□□□□ -2.45
PMS1-219ENST00000483293 J3QLW9 94 aa-0.25□□□□□ -2.45
PMS1-219ENST00000483293 C4orf33Q8N1A6 199 aa-0.25□□□□□ -2.45
PMS1-219ENST00000483293 SMIM11BQ8TCY0 68 aa-0.25□□□□□ -2.45
PMS1-219ENST00000483293 U3KQA8 63 aa-0.25□□□□□ -2.45
PMS1-219ENST00000483293 SYNJ1O43426 1573 aa-0.25□□□□□ -2.45
PMS1-219ENST00000483293 PHIPQ8WWQ0 1821 aa-0.26□□□□□ -2.45
PMS1-219ENST00000483293 SCTP09683 121 aa-0.26□□□□□ -2.45
PMS1-219ENST00000483293 CCL3L1P16619 93 aa-0.26□□□□□ -2.45
PMS1-219ENST00000483293 MAGOHBQ96A72 148 aaKnown RBP-0.26□□□□□ -2.45
PMS1-219ENST00000483293 SSC5DA1L4H1 1573 aa-0.27□□□□□ -2.45
PMS1-219ENST00000483293 APODP05090 189 aa-0.27□□□□□ -2.45
PMS1-219ENST00000483293 NBEAP1P0C6P0 100 aa-0.27□□□□□ -2.45
PMS1-219ENST00000483293 CCDC153Q494R4 210 aa-0.27□□□□□ -2.45
PMS1-219ENST00000483293 C20orf197Q8N268 126 aa-0.27□□□□□ -2.45
PMS1-219ENST00000483293 CDK5RAP2Q96SN8 1893 aa-0.27□□□□□ -2.45
PMS1-219ENST00000483293 UHRF1BP1LA0JNW5 1464 aa-0.28□□□□□ -2.45
PMS1-219ENST00000483293 NCOR1O75376 2440 aa-0.28□□□□□ -2.45
PMS1-219ENST00000483293 ERG28Q9UKR5 140 aa-0.28□□□□□ -2.45
PMS1-219ENST00000483293 ERCC6Q03468 1493 aa-0.29□□□□□ -2.46
PMS1-219ENST00000483293 ARFGEF1Q9Y6D6 1849 aa-0.29□□□□□ -2.46
PMS1-219ENST00000483293 TRBV7-1A0A0A6YYK4 115 aa-0.29□□□□□ -2.46
PMS1-219ENST00000483293 YPEL1O60688 119 aa-0.29□□□□□ -2.46
PMS1-219ENST00000483293 ATP11AUNQ6ZP68 121 aa-0.29□□□□□ -2.46
PMS1-219ENST00000483293 TMEM242Q9NWH2 141 aa-0.29□□□□□ -2.46
PMS1-219ENST00000483293 M0R129 80 aa-0.3□□□□□ -2.46
PMS1-219ENST00000483293 ACYP2P14621 99 aa-0.3□□□□□ -2.46
PMS1-219ENST00000483293 SSBP1Q04837 148 aaKnown RBP-0.3□□□□□ -2.46
PMS1-219ENST00000483293 FAM74A4Q5TZK3 123 aa-0.3□□□□□ -2.46
PMS1-219ENST00000483293 SLC48A1Q6P1K1 146 aa-0.3□□□□□ -2.46
PMS1-219ENST00000483293 NDUFA11Q86Y39 141 aa-0.3□□□□□ -2.46
PMS1-219ENST00000483293 COX7B2Q8TF08 81 aa-0.3□□□□□ -2.46
PMS1-219ENST00000483293 PARP14Q460N5 1801 aa-0.3□□□□□ -2.46
PMS1-219ENST00000483293 NRXN2Q9P2S2 1712 aa-0.3□□□□□ -2.46
PMS1-219ENST00000483293 ANKRD17O75179 2603 aaKnown RBP-0.31□□□□□ -2.46
PMS1-219ENST00000483293 TRAV12-3A0A0B4J271 114 aa-0.31□□□□□ -2.46
PMS1-219ENST00000483293 SPCS2Q15005 226 aa-0.31□□□□□ -2.46
PMS1-219ENST00000483293 Q96NJ1 140 aa-0.31□□□□□ -2.46
PMS1-219ENST00000483293 ARAP1Q96P48 1450 aa-0.32□□□□□ -2.46
PMS1-219ENST00000483293 IFITM1P13164 125 aa-0.32□□□□□ -2.46
PMS1-219ENST00000483293 V9GYV3 84 aa-0.32□□□□□ -2.46
PMS1-219ENST00000483293 SPTBN2O15020 2390 aa-0.33□□□□□ -2.46
PMS1-219ENST00000483293 M0R2P5 195 aa-0.33□□□□□ -2.46
PMS1-219ENST00000483293 MUC22E2RYF6 1773 aaPredicted RBP-0.34□□□□□ -2.46
PMS1-219ENST00000483293 CCDC179H3BU77 68 aa-0.34□□□□□ -2.46
PMS1-219ENST00000483293 TAC4Q86UU9 113 aa-0.34□□□□□ -2.46
PMS1-219ENST00000483293 NDUFA12Q9UI09 145 aa-0.34□□□□□ -2.46
PMS1-219ENST00000483293 NCS1P62166 190 aa-0.35□□□□□ -2.47
PMS1-219ENST00000483293 PTPRQQ9UMZ3 2332 aa-0.35□□□□□ -2.47
PMS1-219ENST00000483293 MYH9P35579 1960 aaKnown RBP-0.36□□□□□ -2.47
PMS1-219ENST00000483293 MYH6P13533 1939 aa-0.36□□□□□ -2.47
PMS1-219ENST00000483293 CHD9Q3L8U1 2897 aa-0.36□□□□□ -2.47
PMS1-219ENST00000483293 DBIP07108 87 aaKnown RBP-0.36□□□□□ -2.47
PMS1-219ENST00000483293 LINC01545Q5VT33 79 aa-0.36□□□□□ -2.47
PMS1-219ENST00000483293 FLNCQ14315 2725 aa-0.36□□□□□ -2.47
PMS1-219ENST00000483293 TRGV1A0A0A0MS02 117 aa-0.37□□□□□ -2.47
PMS1-219ENST00000483293 GCHFRP30047 84 aa-0.37□□□□□ -2.47
PMS1-219ENST00000483293 MIC13Q5XKP0 118 aa-0.37□□□□□ -2.47
PMS1-219ENST00000483293 Q6ZRX8 168 aa-0.37□□□□□ -2.47
PMS1-219ENST00000483293 SPANXCQ9NY87 97 aa-0.37□□□□□ -2.47
PMS1-219ENST00000483293 AKAP6Q13023 2319 aa-0.38□□□□□ -2.47
PMS1-219ENST00000483293 B2MP61769 119 aa-0.38□□□□□ -2.47
PMS1-219ENST00000483293 AIF1LQ9BQI0 150 aa-0.38□□□□□ -2.47
PMS1-219ENST00000483293 TRBV20-1A0A075B6N2 111 aa-0.39□□□□□ -2.47
PMS1-219ENST00000483293 FAM236AA0A1B0GUQ0 79 aa-0.39□□□□□ -2.47
PMS1-219ENST00000483293 FAM236BA0A1B0GV22 79 aa-0.39□□□□□ -2.47
PMS1-219ENST00000483293 KRTAP6-1Q3LI64 71 aa-0.39□□□□□ -2.47
PMS1-219ENST00000483293 DOPEY2Q9Y3R5 2298 aa-0.39□□□□□ -2.47
PMS1-219ENST00000483293 TMEM14DPA8MWL7 114 aa-0.4□□□□□ -2.47
PMS1-219ENST00000483293 MORN2Q502X0 79 aa-0.4□□□□□ -2.47
PMS1-219ENST00000483293 SPANXA1Q9NS26 97 aa-0.4□□□□□ -2.47
PMS1-219ENST00000483293 HMCN2Q8NDA2 5059 aa-0.4□□□□□ -2.47
PMS1-219ENST00000483293 MMGT1Q8N4V1 131 aa-0.42□□□□□ -2.48
PMS1-219ENST00000483293 VSTM2AQ8TAG5 236 aa-0.42□□□□□ -2.48
PMS1-219ENST00000483293 C10orf82Q8WW14 230 aa-0.42□□□□□ -2.48
PMS1-219ENST00000483293 SMIM3Q9BZL3 60 aa-0.42□□□□□ -2.48
PMS1-219ENST00000483293 MUC12Q9UKN1 5478 aa-0.43□□□□□ -2.48
PMS1-219ENST00000483293 CACNA1AO00555 2505 aa-0.43□□□□□ -2.48
PMS1-219ENST00000483293 PIRTP0C851 137 aa-0.43□□□□□ -2.48
PMS1-219ENST00000483293 HIST1H1AQ02539 215 aaPredicted RBP-0.43□□□□□ -2.48
PMS1-219ENST00000483293 RPL7L1Q6DKI1 246 aaKnown RBP-0.43□□□□□ -2.48
PMS1-219ENST00000483293 GOLGA3Q08378 1498 aa-0.43□□□□□ -2.48
PMS1-219ENST00000483293 CFDP00746 253 aaPredicted RBP-0.44□□□□□ -2.48
PMS1-219ENST00000483293 EDDM3BP56851 147 aa-0.44□□□□□ -2.48
PMS1-219ENST00000483293 SPANXN1Q5VSR9 72 aa-0.44□□□□□ -2.48
PMS1-219ENST00000483293 UBE2DNLQ8IWF7 75 aa-0.44□□□□□ -2.48
PMS1-219ENST00000483293 PLCE1Q9P212 2302 aa-0.44□□□□□ -2.48
PMS1-219ENST00000483293 ZNF292O60281 2723 aa-0.44□□□□□ -2.48
PMS1-219ENST00000483293 LAMB1P07942 1786 aa-0.45□□□□□ -2.48
PMS1-219ENST00000483293 ZNF815PA8K554 130 aa-0.45□□□□□ -2.48
PMS1-219ENST00000483293 IGLC6P0CF74 106 aa-0.45□□□□□ -2.48
PMS1-219ENST00000483293 INSL4Q14641 139 aa-0.45□□□□□ -2.48
PMS1-219ENST00000483293 SSBP3-AS1Q7Z2R9 100 aa-0.45□□□□□ -2.48
PMS1-219ENST00000483293 RPRMQ9NS64 109 aa-0.46□□□□□ -2.48
PMS1-219ENST00000483293 NSD1Q96L73 2696 aaPredicted RBP-0.46□□□□□ -2.48
PMS1-219ENST00000483293 ANKRD30AQ9BXX3 1397 aa-0.46□□□□□ -2.48
PMS1-219ENST00000483293 PKDREJQ9NTG1 2253 aa-0.47□□□□□ -2.48
PMS1-219ENST00000483293 C2CD3Q4AC94 2353 aa-0.47□□□□□ -2.48
PMS1-219ENST00000483293 SCGB1A1P11684 91 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 272.7 ms