RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 TRAV4A0A0B4J268 109 aa14.46□□□□□ -0.09
CCM2-214ENST00000481194 GHRHP01286 108 aa14.46□□□□□ -0.09
CCM2-214ENST00000481194 DEFB1P60022 68 aa14.46□□□□□ -0.09
CCM2-214ENST00000481194 ZNF80P51504 273 aaPredicted RBP14.46□□□□□ -0.1
CCM2-214ENST00000481194 A0A1B0GWB2 263 aa14.45□□□□□ -0.1
CCM2-214ENST00000481194 ZC2HC1BQ5TFG8 222 aa14.45□□□□□ -0.1
CCM2-214ENST00000481194 CHAC1Q9BUX1 264 aa14.45□□□□□ -0.1
CCM2-214ENST00000481194 IGHV3-38A0A0C4DH36 116 aa14.44□□□□□ -0.1
CCM2-214ENST00000481194 A0A1B0GXF2 115 aa14.44□□□□□ -0.1
CCM2-214ENST00000481194 PYY3Q5JQD4 70 aa14.44□□□□□ -0.1
CCM2-214ENST00000481194 MSRB1Q9NZV6 116 aa14.44□□□□□ -0.1
CCM2-214ENST00000481194 SPRY2O43597 315 aa14.44□□□□□ -0.1
CCM2-214ENST00000481194 C21orf62-AS1Q17RA5 79 aa14.44□□□□□ -0.1
CCM2-214ENST00000481194 DEFB104AQ8WTQ1 72 aa14.43□□□□□ -0.1
CCM2-214ENST00000481194 DEFB135Q30KP9 77 aa14.43□□□□□ -0.1
CCM2-214ENST00000481194 MRPL52Q86TS9 123 aaKnown RBP14.43□□□□□ -0.1
CCM2-214ENST00000481194 DPH3Q96FX2 82 aa14.43□□□□□ -0.1
CCM2-214ENST00000481194 MRPS12O15235 138 aaKnown RBP14.43□□□□□ -0.1
CCM2-214ENST00000481194 ZFAND2AQ8N6M9 145 aa14.43□□□□□ -0.1
CCM2-214ENST00000481194 F8W735 103 aaPredicted RBP14.43□□□□□ -0.1
CCM2-214ENST00000481194 IGLV2-11P01706 119 aa14.43□□□□□ -0.1
CCM2-214ENST00000481194 HERVK_113P63121 156 aa14.43□□□□□ -0.1
CCM2-214ENST00000481194 GAGE6Q13070 117 aa14.43□□□□□ -0.1
CCM2-214ENST00000481194 TRBV10-1A0A0K0K1A3 114 aa14.42□□□□□ -0.1
CCM2-214ENST00000481194 C18orf65Q6ZTR6 163 aa14.42□□□□□ -0.1
CCM2-214ENST00000481194 DCANP1Q8TF63 244 aa14.42□□□□□ -0.1
CCM2-214ENST00000481194 NEGR1Q7Z3B1 354 aa14.42□□□□□ -0.1
CCM2-214ENST00000481194 TNCP24821 2201 aa14.42□□□□□ -0.1
CCM2-214ENST00000481194 LYRM9A8MSI8 78 aa14.42□□□□□ -0.1
CCM2-214ENST00000481194 F8VRH5 84 aa14.42□□□□□ -0.1
CCM2-214ENST00000481194 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.41□□□□□ -0.1
CCM2-214ENST00000481194 hDV102S1A0JD36 115 aa14.41□□□□□ -0.1
CCM2-214ENST00000481194 C6orf226Q5I0X4 101 aa14.41□□□□□ -0.1
CCM2-214ENST00000481194 NAV3Q8IVL0 2385 aa14.41□□□□□ -0.1
CCM2-214ENST00000481194 ATP6V0E2Q8NHE4 81 aa14.41□□□□□ -0.1
CCM2-214ENST00000481194 MRAPQ8TCY5 172 aa14.41□□□□□ -0.1
CCM2-214ENST00000481194 Q6ZWC4 215 aa14.41□□□□□ -0.1
CCM2-214ENST00000481194 ORAOV1Q8WV07 137 aa14.41□□□□□ -0.1
CCM2-214ENST00000481194 MDFICQ9P1T7 246 aa14.41□□□□□ -0.1
CCM2-214ENST00000481194 IGLL1P15814 213 aa14.4□□□□□ -0.1
CCM2-214ENST00000481194 LINC00322Q6ZN03 302 aaPredicted RBP14.4□□□□□ -0.1
CCM2-214ENST00000481194 H3BUT2 72 aa14.4□□□□□ -0.1
CCM2-214ENST00000481194 IGHV3-64A0A075B6Q5 118 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 PSCAO43653 123 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 GYPEP15421 78 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 TRBV7-3A0A075B6L6 115 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 LINC00158P58513 81 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 ZFP2Q6ZN57 461 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 RPL39LQ96EH5 51 aaKnown RBP14.39□□□□□ -0.11
CCM2-214ENST00000481194 DOPEY2Q9Y3R5 2298 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 NHP2Q9NX24 153 aaKnown RBP14.39□□□□□ -0.11
CCM2-214ENST00000481194 TSPAN13O95857 204 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 ZNF747Q9BV97 191 aa14.39□□□□□ -0.11
CCM2-214ENST00000481194 KIR2DL5BA0A0G2JN68 375 aa14.38□□□□□ -0.11
CCM2-214ENST00000481194 KIR2DL5BA0A0G2JPC4 375 aa14.38□□□□□ -0.11
CCM2-214ENST00000481194 KIR2DL5AQ8N109 375 aa14.38□□□□□ -0.11
CCM2-214ENST00000481194 KIR2DL5BQ8NHK3 375 aa14.38□□□□□ -0.11
CCM2-214ENST00000481194 PRRC2AP48634 2157 aaKnown RBP14.38□□□□□ -0.11
CCM2-214ENST00000481194 PTPN13Q12923 2485 aa14.38□□□□□ -0.11
CCM2-214ENST00000481194 HHLA3Q9XRX5 114 aa14.38□□□□□ -0.11
CCM2-214ENST00000481194 KLLNB2CW77 178 aa14.38□□□□□ -0.11
CCM2-214ENST00000481194 FSHBP01225 129 aa14.37□□□□□ -0.11
CCM2-214ENST00000481194 ARHGAP32A7KAX9 2087 aa14.37□□□□□ -0.11
CCM2-214ENST00000481194 GATA1P15976 413 aaPredicted RBP14.37□□□□□ -0.11
CCM2-214ENST00000481194 C10orf126Q8N4M7 172 aa14.36□□□□□ -0.11
CCM2-214ENST00000481194 IL17DQ8TAD2 202 aa14.36□□□□□ -0.11
CCM2-214ENST00000481194 A0A0J9YY99 117 aa14.36□□□□□ -0.11
CCM2-214ENST00000481194 ESDP10768 282 aa14.36□□□□□ -0.11
CCM2-214ENST00000481194 MIFP14174 115 aa14.36□□□□□ -0.11
CCM2-214ENST00000481194 PRO0255Q9UI72 69 aa14.35□□□□□ -0.11
CCM2-214ENST00000481194 PRIMA1Q86XR5 153 aa14.34□□□□□ -0.11
CCM2-214ENST00000481194 CHD8Q9HCK8 2581 aa14.34□□□□□ -0.11
CCM2-214ENST00000481194 CRIP1P50238 77 aa14.34□□□□□ -0.11
CCM2-214ENST00000481194 SLC25A20O43772 301 aa14.34□□□□□ -0.11
CCM2-214ENST00000481194 MRPL35Q9NZE8 188 aaKnown RBP14.34□□□□□ -0.11
CCM2-214ENST00000481194 SPATA25Q9BR10 227 aa14.34□□□□□ -0.11
CCM2-214ENST00000481194 CSPG4Q6UVK1 2322 aa14.33□□□□□ -0.12
CCM2-214ENST00000481194 GDF5OSQ5U4N7 250 aa14.33□□□□□ -0.12
CCM2-214ENST00000481194 SFTA2Q6UW10 78 aa14.33□□□□□ -0.12
CCM2-214ENST00000481194 PKD1L2Q7Z442 2459 aa14.33□□□□□ -0.12
CCM2-214ENST00000481194 IGLV1-51P01701 117 aa14.33□□□□□ -0.12
CCM2-214ENST00000481194 ANGP03950 147 aaKnown RBP14.33□□□□□ -0.12
CCM2-214ENST00000481194 TDRG1Q3Y452 100 aa14.32□□□□□ -0.12
CCM2-214ENST00000481194 TOMM6Q96B49 74 aa14.32□□□□□ -0.12
CCM2-214ENST00000481194 TIMM17AQ99595 171 aa14.32□□□□□ -0.12
CCM2-214ENST00000481194 NOTCH2Q04721 2471 aa14.32□□□□□ -0.12
CCM2-214ENST00000481194 PIK3CD-AS1Q5SR53 167 aa14.32□□□□□ -0.12
CCM2-214ENST00000481194 BOD1L2Q8IYS8 172 aa14.31□□□□□ -0.12
CCM2-214ENST00000481194 TP53TG3Q9ULZ0 132 aa14.31□□□□□ -0.12
CCM2-214ENST00000481194 TRAV12-1A0A0B4J245 112 aa14.31□□□□□ -0.12
CCM2-214ENST00000481194 ZNF561-AS1K7EIQ3 104 aa14.31□□□□□ -0.12
CCM2-214ENST00000481194 CCL18P55774 89 aa14.31□□□□□ -0.12
CCM2-214ENST00000481194 GATD1Q8NB37 220 aa14.31□□□□□ -0.12
CCM2-214ENST00000481194 A0A1B0GV72 72 aa14.3□□□□□ -0.12
CCM2-214ENST00000481194 PRSS29PA6NIE9 313 aa14.3□□□□□ -0.12
CCM2-214ENST00000481194 PCP4P48539 62 aa14.3□□□□□ -0.12
CCM2-214ENST00000481194 KLK9Q2XQG4 91 aa14.3□□□□□ -0.12
CCM2-214ENST00000481194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.3□□□□□ -0.12
CCM2-214ENST00000481194 IGKV2-29A2NJV5 120 aaPredicted RBP14.3□□□□□ -0.12
CCM2-214ENST00000481194 ZNF479Q96JC4 524 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms