RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 DOPEY2Q9Y3R5 2298 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 SPTBN2O15020 2390 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 SPINK1P00995 79 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 CD3DP04234 171 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 SNRPD3P62318 126 aaKnown RBP0.26□□□□□ -2.37
CCDC58-204ENST00000479414 ASB16-AS1Q495Z4 193 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 XAF1Q6GPH4 301 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 TMEM229BQ8NBD8 167 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 FAM135BQ49AJ0 1406 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 ANK3Q12955 4377 aaKnown RBP0.26□□□□□ -2.37
CCDC58-204ENST00000479414 GAPVD1Q14C86 1478 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 RALGAPBQ86X10 1494 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 DYNC1H1Q14204 4646 aaKnown RBP0.26□□□□□ -2.37
CCDC58-204ENST00000479414 UNC13BO14795 1591 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 STARD9Q9P2P6 4700 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 USP32Q8NFA0 1604 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 CROCC2H7BZ55 1655 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 SPHKAPQ2M3C7 1700 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 MED13LQ71F56 2210 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 CENPEQ02224 2701 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 PKD1P98161 4303 aa0.26□□□□□ -2.37
CCDC58-204ENST00000479414 PLECQ15149 4684 aaKnown RBP0.25□□□□□ -2.37
CCDC58-204ENST00000479414 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 KIDINS220Q9ULH0 1771 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 RGPD1P0DJD0 1748 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 TJP1Q07157 1748 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 MARF1Q9Y4F3 1742 aaKnown RBP0.25□□□□□ -2.37
CCDC58-204ENST00000479414 SHPRHQ149N8 1683 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 ROBO1Q9Y6N7 1651 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 MAP3K4Q9Y6R4 1608 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 TTC37Q6PGP7 1564 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 EPRSP07814 1512 aaKnown RBP0.25□□□□□ -2.37
CCDC58-204ENST00000479414 FAM135AQ9P2D6 1515 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 DCAF1Q9Y4B6 1507 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 ROCK1Q13464 1354 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 NBDYA0A0U1RRE5 68 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 PFDN1O60925 122 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 RPL7P18124 248 aaKnown RBP0.25□□□□□ -2.37
CCDC58-204ENST00000479414 RPS3P23396 243 aaKnown RBP eCLIP0.25□□□□□ -2.37
CCDC58-204ENST00000479414 CCDC32Q9BV29 185 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 COMMD3Q9UBI1 195 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 TRAPPC2LQ9UL33 140 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 LAMTOR2Q9Y2Q5 125 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 MED31Q9Y3C7 131 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 SRRM2Q9UQ35 2752 aaKnown RBP0.25□□□□□ -2.37
CCDC58-204ENST00000479414 DNAH9Q9NYC9 4486 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 APC2O95996 2303 aa0.25□□□□□ -2.37
CCDC58-204ENST00000479414 FER1L6Q2WGJ9 1857 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.24□□□□□ -2.37
CCDC58-204ENST00000479414 ZC3H13Q5T200 1668 aaKnown RBP0.24□□□□□ -2.37
CCDC58-204ENST00000479414 CEP170BQ9Y4F5 1589 aaPredicted RBP0.24□□□□□ -2.37
CCDC58-204ENST00000479414 LAMC3Q9Y6N6 1575 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 SLIT1O75093 1534 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 KIAA0586Q9BVV6 1533 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 TULP4Q9NRJ4 1543 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 ACANP16112 2415 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 PKHD1L1Q86WI1 4243 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.24□□□□□ -2.37
CCDC58-204ENST00000479414 TRAV13-1A0A0B4J241 112 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 LOC101927531A0A1B0GV80 90 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 SLC25A4P12235 298 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 LSM3P62310 102 aaKnown RBP0.24□□□□□ -2.37
CCDC58-204ENST00000479414 LRP2P98164 4655 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 ZNF56Q15929 161 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 C3orf62Q6ZUJ4 267 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 DEFB123Q8N688 67 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 TCTEX1D1Q8N7M0 179 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 MORN4Q8NDC4 146 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 THEM6Q8WUY1 208 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 PPP1R1CQ8WVI7 109 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 PRO3102Q9H379 93 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 ATG2AQ2TAZ0 1938 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 LRRC37A3O60309 1634 aa0.24□□□□□ -2.37
CCDC58-204ENST00000479414 CPS1P31327 1500 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 CDK13Q14004 1512 aaKnown RBP0.23□□□□□ -2.37
CCDC58-204ENST00000479414 NRXN1Q9ULB1 1477 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 DNAH6Q9C0G6 4158 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 CACNA1HO95180 2353 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 A0A1W2PPB8 328 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 BBIP1A8MTZ0 92 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 KIR3DP1A8MWS1 328 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 H3BMG7 143 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 GYPBP06028 91 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 SAA1P0DJI8 122 aaPredicted RBP0.23□□□□□ -2.37
CCDC58-204ENST00000479414 FXYD3Q14802 87 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 C10orf99Q6UWK7 81 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 FAT2Q9NYQ8 4349 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 CSMD3Q7Z407 3707 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 PKD1L3Q7Z443 1732 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 ZNF142P52746 1687 aaPredicted RBP0.23□□□□□ -2.37
CCDC58-204ENST00000479414 TNRC6CQ9HCJ0 1690 aaKnown RBP0.23□□□□□ -2.37
CCDC58-204ENST00000479414 ADGRB1O14514 1584 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 UGGT1Q9NYU2 1555 aa0.23□□□□□ -2.37
CCDC58-204ENST00000479414 CSPG4Q6UVK1 2322 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 GRIN2AQ12879 1464 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 HRNRQ86YZ3 2850 aaPredicted RBP0.22□□□□□ -2.37
CCDC58-204ENST00000479414 ITSN2Q9NZM3 1697 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 CDC42EP2O14613 210 aa0.22□□□□□ -2.37
CCDC58-204ENST00000479414 POLR2HP52434 150 aaKnown RBP0.22□□□□□ -2.37
CCDC58-204ENST00000479414 FAM213BQ8TBF2 198 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms