RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 MDFIC2A0A1B0GVS7 189 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 FAM24AA6NFZ4 105 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 B4DSR2 109 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 H3BRM9 83 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 CREBL2O60519 120 aaPredicted RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 YPEL1O60688 119 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 TIMM17BO60830 172 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 PROSCO94903 275 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 IGHV3-7P01780 117 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 IGKCP01834 107 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 SHBGP04278 402 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 IGHV3-30-3P0DP02 117 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 CCL4P13236 92 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 FAUP35544 74 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 ASIPP42127 132 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 POLR2JP52435 117 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 HIST1H4AP62805 103 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 BLCAPP62952 87 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 DYNLT1P63172 113 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 RPL18Q07020 188 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 CIRBPQ14011 172 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 CDK5R1Q15078 307 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 TPRXLQ17RH7 258 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 SPATA45Q537H7 98 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 BVES-AS1Q5T3Y7 98 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 DPPA3Q6W0C5 159 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 MIR17HGQ75NE6 70 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 SBSPONQ8IVN8 264 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 OR5AS1Q8N127 324 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 FAM216BQ8N7L0 139 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 SIGLECL1Q8N7X8 197 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 Q8N8P6 123 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 OR10AG1Q8NH19 301 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 VSTM2AQ8TAG5 236 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 TSKUQ8WUA8 353 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 CLEC2BQ92478 149 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 POP5Q969H6 163 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 MCEEQ96PE7 176 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 YPEL2Q96QA6 119 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 NABP2Q9BQ15 211 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 C11orf1Q9H5F2 150 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 ST20Q9HBF5 79 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 SPCS1Q9Y6A9 102 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 C10orf71Q711Q0 1435 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 DIP2AQ14689 1571 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 TENM3Q9P273 2699 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 XRN1Q8IZH2 1706 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 PEAK1Q9H792 1746 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 BAZ2BQ9UIF8 2168 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 CDK13Q14004 1512 aaKnown RBP0.94□□□□□ -2.26
VPS50-213ENST00000477572 DISP1Q96F81 1524 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 LRRC7Q96NW7 1537 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 ARHGEF12Q9NZN5 1544 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 ARFGEF1Q9Y6D6 1849 aa0.94□□□□□ -2.26
VPS50-213ENST00000477572 PTPN23Q9H3S7 1636 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 MAP3K4Q9Y6R4 1608 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 GOLGA3Q08378 1498 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 PXDNQ92626 1479 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 SHANK2Q9UPX8 1470 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 CPAMD8Q8IZJ3 1885 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 PLXNC1O60486 1568 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 TIAM1Q13009 1591 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 CFAP74Q9C0B2 1584 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 DIP2CQ9Y2E4 1556 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 RIC1Q4ADV7 1423 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 ANKARQ7Z5J8 1434 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 TRBV7-7A0A0K0K1E9 115 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 A0A1B0GW54 56 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 A0A1W2PPM0 123 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 A0A1W2PQD3 144 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 C11orf86A6NJI1 115 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 ZNF736B4DX44 427 aaPredicted RBP0.93□□□□□ -2.26
VPS50-213ENST00000477572 H3BUT2 72 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 SDCBPO00560 298 aaPredicted RBP0.93□□□□□ -2.26
VPS50-213ENST00000477572 SSSCA1O60232 199 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 GYPAP02724 150 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 IL5P05113 134 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 DEFA4P12838 97 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 NPPCP23582 126 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 SSR2P43308 183 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 RPL27AP46776 148 aaKnown RBP0.93□□□□□ -2.26
VPS50-213ENST00000477572 KRTAP10-4P60372 401 aaPredicted RBP0.93□□□□□ -2.26
VPS50-213ENST00000477572 SUPT4H1P63272 117 aaKnown RBP0.93□□□□□ -2.26
VPS50-213ENST00000477572 SEC11AP67812 179 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 RBM3P98179 157 aaKnown RBP0.93□□□□□ -2.26
VPS50-213ENST00000477572 WFDC2Q14508 124 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 ADIRFQ15847 76 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 ETDBQ3ZM63 59 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 S100A7L2Q5SY68 101 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 C2orf91Q6ZV80 131 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 CNEP1R1Q8N9A8 125 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 OR2T35Q8NGX2 323 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 PFN4Q8NHR9 129 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 CCL4L1Q8NHW4 92 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 ZNF563Q8TA94 476 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 PPDPFLQ8WWR9 84 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 AQP3Q92482 292 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 SPTSSAQ969W0 71 aa0.93□□□□□ -2.26
VPS50-213ENST00000477572 CHCHD1Q96BP2 118 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms