RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TRAV8-4A0A0B4J246 113 aa11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 TRAV21A0A0B4J279 112 aa11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 LGALS3P17931 250 aaKnown RBP11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 Q8N6K4 173 aa11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 COL12A1Q99715 3063 aa11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 UBR5O95071 2799 aaPredicted RBP11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 M0R1W7 72 aa11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 PRTN3P24158 256 aa11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 C9orf139Q6ZV77 190 aa11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 OR10J6PQ8NGY7 276 aa11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 SPTAN1Q13813 2472 aaKnown RBP11.55□□□□□ -0.56
CLSTN1-205ENST00000477264 DUSP14O95147 198 aaKnown RBP11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 Q6ZS46 218 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 TMEM263Q8WUH6 116 aaKnown RBP11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 METTL26Q96S19 204 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 PHLDA3Q9Y5J5 127 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 TRAV4A0A0B4J268 109 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 J3QQQ9 107 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 MGPP08493 103 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 S100A4P26447 101 aaKnown RBP11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 EBI3Q14213 229 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 Q8N1Y9 231 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 AMELXQ99217 191 aa11.54□□□□□ -0.56
CLSTN1-205ENST00000477264 KMT2BQ9UMN6 2715 aaPredicted RBP11.53□□□□□ -0.56
CLSTN1-205ENST00000477264 TGFAP01135 160 aa11.53□□□□□ -0.56
CLSTN1-205ENST00000477264 NTN5Q8WTR8 489 aaPredicted RBP11.53□□□□□ -0.56
CLSTN1-205ENST00000477264 LINC00477Q96M19 166 aa11.53□□□□□ -0.56
CLSTN1-205ENST00000477264 TP53TG1Q9Y2A0 90 aa11.53□□□□□ -0.56
CLSTN1-205ENST00000477264 DCHS2Q6V1P9 2916 aa11.53□□□□□ -0.56
CLSTN1-205ENST00000477264 IGHV4OR15-8A0A075B7B6 117 aa11.52□□□□□ -0.56
CLSTN1-205ENST00000477264 A0A087WW49 117 aa11.52□□□□□ -0.56
CLSTN1-205ENST00000477264 TRBV10-2A0A0K0K1G8 114 aa11.52□□□□□ -0.56
CLSTN1-205ENST00000477264 CLPSL1A2RUU4 121 aa11.52□□□□□ -0.56
CLSTN1-205ENST00000477264 NXPH4O95158 308 aa11.52□□□□□ -0.56
CLSTN1-205ENST00000477264 TSPEAR-AS2P59090 65 aa11.52□□□□□ -0.56
CLSTN1-205ENST00000477264 CCL19Q99731 98 aa11.52□□□□□ -0.56
CLSTN1-205ENST00000477264 A4D1N5 150 aa11.52□□□□□ -0.57
CLSTN1-205ENST00000477264 H3BMM0 161 aa11.52□□□□□ -0.57
CLSTN1-205ENST00000477264 LEPROTO15243 131 aa11.52□□□□□ -0.57
CLSTN1-205ENST00000477264 TSHBP01222 138 aa11.52□□□□□ -0.57
CLSTN1-205ENST00000477264 TMEM95Q3KNT9 176 aa11.52□□□□□ -0.57
CLSTN1-205ENST00000477264 C14orf178Q8N769 122 aaPredicted RBP11.52□□□□□ -0.57
CLSTN1-205ENST00000477264 UBE2WQ96B02 151 aa11.52□□□□□ -0.57
CLSTN1-205ENST00000477264 A0A0J9YX75 114 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 CCDC179H3BU77 68 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 C15orf32Q32M92 178 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 ZNF876PQ49A33 203 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 TMEM170BQ5T4T1 132 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 GPHB5Q86YW7 130 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 U3KQE9 123 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 FAM208BQ5VWN6 2430 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 IGHV7-81A0A0B4J1V7 117 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 TRBV30A0A0K0K1B3 111 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 FAM240AA0A1B0GVK7 77 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 ARL3P36405 182 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 PRR9Q5T870 116 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 MDFICQ9P1T7 246 aa11.51□□□□□ -0.57
CLSTN1-205ENST00000477264 IGHV3OR16-8A0A075B7F1 116 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 SDHAF1A6NFY7 115 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 H3BT86 120 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 OVOL1O14753 267 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 MINOS1Q5TGZ0 78 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 TRPT1Q86TN4 253 aaKnown RBP11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 ZFAND2AQ8N6M9 145 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 C15orf53Q8NAA6 179 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 EEF1AKMT3Q96AZ1 226 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 C16orf92Q96LL3 132 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 SPANXDQ9BXN6 97 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 MINOS1-NBL1R4GNA1 71 aa11.5□□□□□ -0.57
CLSTN1-205ENST00000477264 IGHV3-35A0A0C4DH35 117 aa11.49□□□□□ -0.57
CLSTN1-205ENST00000477264 LGALS9O00182 355 aa11.49□□□□□ -0.57
CLSTN1-205ENST00000477264 VCYO14598 125 aa11.49□□□□□ -0.57
CLSTN1-205ENST00000477264 CRLF1O75462 422 aa11.49□□□□□ -0.57
CLSTN1-205ENST00000477264 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
CLSTN1-205ENST00000477264 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
CLSTN1-205ENST00000477264 CHD6Q8TD26 2715 aa11.48□□□□□ -0.57
CLSTN1-205ENST00000477264 TRBV7-1A0A0A6YYK4 115 aa11.48□□□□□ -0.57
CLSTN1-205ENST00000477264 POLR2KP53803 58 aaKnown RBP11.48□□□□□ -0.57
CLSTN1-205ENST00000477264 HERV-K104P63124 156 aa11.48□□□□□ -0.57
CLSTN1-205ENST00000477264 Q1RN00 199 aa11.48□□□□□ -0.57
CLSTN1-205ENST00000477264 SMIM20Q8N5G0 67 aa11.48□□□□□ -0.57
CLSTN1-205ENST00000477264 TMEM126AQ9H061 195 aa11.48□□□□□ -0.57
CLSTN1-205ENST00000477264 TRAV2A0A0B4J234 112 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 M0R2P5 195 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 APRG1Q8IVJ8 170 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 UTP20O75691 2785 aaKnown RBP11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 LRRK2Q5S007 2527 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 AKAP6Q13023 2319 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 IGHV3-66A0A0C4DH42 116 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 FAM159AQ6UWV7 190 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 CCDC140Q96MF4 163 aa11.47□□□□□ -0.57
CLSTN1-205ENST00000477264 J3QKU1 62 aa11.46□□□□□ -0.57
CLSTN1-205ENST00000477264 IGHV4-39P01824 125 aa11.46□□□□□ -0.57
CLSTN1-205ENST00000477264 ANXA2RQ3ZCQ2 193 aa11.46□□□□□ -0.57
CLSTN1-205ENST00000477264 SHISA2Q6UWI4 295 aa11.46□□□□□ -0.57
CLSTN1-205ENST00000477264 Q6ZQT7 251 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms