RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 CLLU1Q5K131 121 aa12.3□□□□□ -0.44
SMIM4-202ENST00000476842 NEGR1Q7Z3B1 354 aa12.3□□□□□ -0.44
SMIM4-202ENST00000476842 A0A087WWL8 130 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 MUC21A0A0G2JKD1 596 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 LOC100131303A0A0U1RQF7 123 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 MUC21A0A140T8X8 626 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 GATCO43716 136 aaKnown RBP12.29□□□□□ -0.44
SMIM4-202ENST00000476842 SRIP30626 198 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 LYPD5Q6UWN5 251 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 SH2D6Q7Z4S9 175 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 ZNRF2Q8NHG8 242 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 TPPP3Q9BW30 176 aa12.29□□□□□ -0.44
SMIM4-202ENST00000476842 ERVFC1-1P60608 527 aa12.28□□□□□ -0.44
SMIM4-202ENST00000476842 CACNG7P62955 275 aa12.28□□□□□ -0.44
SMIM4-202ENST00000476842 FAM74A4Q5TZK3 123 aa12.28□□□□□ -0.44
SMIM4-202ENST00000476842 WDR73Q6P4I2 378 aa12.28□□□□□ -0.44
SMIM4-202ENST00000476842 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
SMIM4-202ENST00000476842 UPK3BQ9BT76 320 aa12.28□□□□□ -0.44
SMIM4-202ENST00000476842 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
SMIM4-202ENST00000476842 SSTP61278 116 aa12.27□□□□□ -0.45
SMIM4-202ENST00000476842 SOHLH1Q5JUK2 328 aa12.27□□□□□ -0.45
SMIM4-202ENST00000476842 OSTCQ9NRP0 149 aa12.27□□□□□ -0.45
SMIM4-202ENST00000476842 NAT8Q9UHE5 227 aa12.27□□□□□ -0.45
SMIM4-202ENST00000476842 A8MWL6 223 aa12.26□□□□□ -0.45
SMIM4-202ENST00000476842 RPL23P62829 140 aaKnown RBP12.26□□□□□ -0.45
SMIM4-202ENST00000476842 CT83Q5H943 113 aa12.26□□□□□ -0.45
SMIM4-202ENST00000476842 Q9H8V8 135 aa12.26□□□□□ -0.45
SMIM4-202ENST00000476842 IGLV2-18A0A075B6J9 118 aa12.25□□□□□ -0.45
SMIM4-202ENST00000476842 C14orf178Q8N769 122 aaPredicted RBP12.25□□□□□ -0.45
SMIM4-202ENST00000476842 MSRB1Q9NZV6 116 aa12.25□□□□□ -0.45
SMIM4-202ENST00000476842 KIF25-AS1Q9Y6Z4 181 aa12.25□□□□□ -0.45
SMIM4-202ENST00000476842 NACAE9PAV3 2078 aa12.24□□□□□ -0.45
SMIM4-202ENST00000476842 NTF3P20783 257 aa12.24□□□□□ -0.45
SMIM4-202ENST00000476842 CTRLP40313 264 aa12.24□□□□□ -0.45
SMIM4-202ENST00000476842 FOXA3P55318 350 aaPredicted RBP12.24□□□□□ -0.45
SMIM4-202ENST00000476842 RAB4BP61018 213 aa12.24□□□□□ -0.45
SMIM4-202ENST00000476842 GTSF1Q8WW33 167 aa12.24□□□□□ -0.45
SMIM4-202ENST00000476842 ISOC2Q96AB3 205 aa12.24□□□□□ -0.45
SMIM4-202ENST00000476842 AP1S3Q96PC3 154 aa12.24□□□□□ -0.45
SMIM4-202ENST00000476842 CNFNQ9BYD5 112 aa12.24□□□□□ -0.45
SMIM4-202ENST00000476842 M0R2N4 97 aa12.23□□□□□ -0.45
SMIM4-202ENST00000476842 TIRAPP58753 221 aa12.23□□□□□ -0.45
SMIM4-202ENST00000476842 LINC00315P59091 139 aa12.23□□□□□ -0.45
SMIM4-202ENST00000476842 Q6ZR54 194 aa12.23□□□□□ -0.45
SMIM4-202ENST00000476842 Q9UF83 564 aa12.23□□□□□ -0.45
SMIM4-202ENST00000476842 DNAH10Q8IVF4 4471 aa12.22□□□□□ -0.45
SMIM4-202ENST00000476842 SMIM17P0DL12 118 aa12.22□□□□□ -0.45
SMIM4-202ENST00000476842 ADIRFQ15847 76 aa12.22□□□□□ -0.45
SMIM4-202ENST00000476842 C15orf54Q8N8G6 183 aa12.22□□□□□ -0.45
SMIM4-202ENST00000476842 DNAH2Q9P225 4427 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 TRBV10-1A0A0K0K1A3 114 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 FAM231BA6NCW3 169 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 GAGE12JA6NER3 117 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 TRGC1P0CF51 173 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 LINC00694P0DN24 101 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 GAGE1Q13065 139 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 GAGE4Q13068 117 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 GAGE5Q13069 117 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 GAGE13Q4V321 117 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 ATP6V0E2Q8NHE4 81 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 TSKUQ8WUA8 353 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 V9GYV3 84 aa12.21□□□□□ -0.45
SMIM4-202ENST00000476842 TWIST1Q15672 202 aa12.2□□□□□ -0.46
SMIM4-202ENST00000476842 ZNF56Q15929 161 aa12.2□□□□□ -0.46
SMIM4-202ENST00000476842 OR10G8Q8NGN5 311 aa12.2□□□□□ -0.46
SMIM4-202ENST00000476842 F5H697 171 aa12.19□□□□□ -0.46
SMIM4-202ENST00000476842 SIVA1O15304 175 aa12.19□□□□□ -0.46
SMIM4-202ENST00000476842 EVI2AP22794 236 aa12.19□□□□□ -0.46
SMIM4-202ENST00000476842 PGLYRP4Q96LB8 373 aa12.19□□□□□ -0.46
SMIM4-202ENST00000476842 GTSF1LQ9H1H1 148 aa12.19□□□□□ -0.46
SMIM4-202ENST00000476842 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
SMIM4-202ENST00000476842 RPL36AP83881 106 aaKnown RBP12.17□□□□□ -0.46
SMIM4-202ENST00000476842 UQCC3Q6UW78 93 aa12.17□□□□□ -0.46
SMIM4-202ENST00000476842 RPL36ALQ969Q0 106 aaKnown RBP12.17□□□□□ -0.46
SMIM4-202ENST00000476842 DPH3P1Q9H4G8 78 aa12.17□□□□□ -0.46
SMIM4-202ENST00000476842 TRBV7-3A0A075B6L6 115 aa12.16□□□□□ -0.46
SMIM4-202ENST00000476842 TTC32Q5I0X7 151 aa12.16□□□□□ -0.46
SMIM4-202ENST00000476842 LELP1Q5T871 98 aa12.16□□□□□ -0.46
SMIM4-202ENST00000476842 A0A1B0GUT8 65 aa12.15□□□□□ -0.46
SMIM4-202ENST00000476842 MGPP08493 103 aa12.15□□□□□ -0.46
SMIM4-202ENST00000476842 UBE2D3P61077 147 aa12.15□□□□□ -0.46
SMIM4-202ENST00000476842 UBE2D2P62837 147 aa12.15□□□□□ -0.46
SMIM4-202ENST00000476842 WFDC10BQ8IUB3 73 aa12.15□□□□□ -0.46
SMIM4-202ENST00000476842 NEXN-AS1Q8NBZ9 246 aa12.15□□□□□ -0.46
SMIM4-202ENST00000476842 BORCS7Q96B45 105 aa12.15□□□□□ -0.46
SMIM4-202ENST00000476842 TRAV8-6A0A0B4J262 113 aa12.14□□□□□ -0.47
SMIM4-202ENST00000476842 M0QY20 66 aa12.14□□□□□ -0.47
SMIM4-202ENST00000476842 C1orf134Q5TEV5 83 aa12.14□□□□□ -0.47
SMIM4-202ENST00000476842 SMIM15Q7Z3B0 74 aa12.14□□□□□ -0.47
SMIM4-202ENST00000476842 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
SMIM4-202ENST00000476842 DNAH17Q9UFH2 4485 aa12.13□□□□□ -0.47
SMIM4-202ENST00000476842 A0A087WWC5 75 aa12.13□□□□□ -0.47
SMIM4-202ENST00000476842 SMIM27A0A1W2PRY6 76 aa12.13□□□□□ -0.47
SMIM4-202ENST00000476842 H7C1H1 209 aa12.13□□□□□ -0.47
SMIM4-202ENST00000476842 PNRC1Q12796 327 aaPredicted RBP12.13□□□□□ -0.47
SMIM4-202ENST00000476842 OR10J3Q5JRS4 329 aa12.13□□□□□ -0.47
SMIM4-202ENST00000476842 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
SMIM4-202ENST00000476842 KRTAP1-5Q9BYS1 174 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms