RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 BET1LQ9NYM9 111 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 KDM6BO15054 1643 aa0.12□□□□□ -2.39
LTN1-204ENST00000475344 ERCC6Q03468 1493 aa0.11□□□□□ -2.39
LTN1-204ENST00000475344 UNC13AQ9UPW8 1703 aa0.11□□□□□ -2.39
LTN1-204ENST00000475344 TRAV12-2A0A075B6T6 113 aa0.11□□□□□ -2.39
LTN1-204ENST00000475344 TCRBV3S1A0A5B6 114 aa0.11□□□□□ -2.39
LTN1-204ENST00000475344 MCRIP1C9JLW8 97 aa0.11□□□□□ -2.39
LTN1-204ENST00000475344 M0R2P5 195 aa0.11□□□□□ -2.39
LTN1-204ENST00000475344 NPC2P61916 151 aa0.11□□□□□ -2.39
LTN1-204ENST00000475344 PYDC1Q8WXC3 89 aa0.11□□□□□ -2.39
LTN1-204ENST00000475344 MYH9P35579 1960 aaKnown RBP0.1□□□□□ -2.39
LTN1-204ENST00000475344 A0A087WTM6 91 aa0.1□□□□□ -2.39
LTN1-204ENST00000475344 J3QLW9 94 aa0.1□□□□□ -2.39
LTN1-204ENST00000475344 M0R129 80 aa0.1□□□□□ -2.39
LTN1-204ENST00000475344 ARPC5O15511 151 aa0.1□□□□□ -2.39
LTN1-204ENST00000475344 YPEL1O60688 119 aa0.1□□□□□ -2.39
LTN1-204ENST00000475344 CKS1BP61024 79 aa0.1□□□□□ -2.39
LTN1-204ENST00000475344 TRBV20-1A0A075B6N2 111 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 FAM236AA0A1B0GUQ0 79 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 FAM236BA0A1B0GV22 79 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 IGLC6P0CF74 106 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 NCS1P62166 190 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 CYP2G1PQ6ZSU1 146 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 NDUFA11Q86Y39 141 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 PPP1R1CQ8WVI7 109 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 NRXN2Q9P2S2 1712 aa0.09□□□□□ -2.4
LTN1-204ENST00000475344 ARHGEF10O15013 1369 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 F2Z2F3 143 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 LINC00694P0DN24 101 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 CCL3L1P16619 93 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 LINC01545Q5VT33 79 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 MIC13Q5XKP0 118 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 PRR15LQ9BU68 103 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 SMIM3Q9BZL3 60 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 NDUFA12Q9UI09 145 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 ERG28Q9UKR5 140 aa0.08□□□□□ -2.4
LTN1-204ENST00000475344 HIVEP3Q5T1R4 2406 aa0.07□□□□□ -2.4
LTN1-204ENST00000475344 GVQW2A0A096LPI5 108 aaPredicted RBP0.07□□□□□ -2.4
LTN1-204ENST00000475344 RBAKDNA6NC62 111 aa0.07□□□□□ -2.4
LTN1-204ENST00000475344 C20orf197Q8N268 126 aa0.07□□□□□ -2.4
LTN1-204ENST00000475344 MMGT1Q8N4V1 131 aa0.07□□□□□ -2.4
LTN1-204ENST00000475344 BATF3Q9NR55 127 aa0.07□□□□□ -2.4
LTN1-204ENST00000475344 GSKIPQ9P0R6 139 aa0.07□□□□□ -2.4
LTN1-204ENST00000475344 PLCE1Q9P212 2302 aa0.07□□□□□ -2.4
LTN1-204ENST00000475344 LAMB1P07942 1786 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 SPTBN2O15020 2390 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 SOGA1O94964 1423 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 WNK2Q9Y3S1 2297 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 TRAV12-3A0A0B4J271 114 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 CCDC179H3BU77 68 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 PITX3O75364 302 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 SPCS2Q15005 226 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 C4orf33Q8N1A6 199 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 Q96NJ1 140 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 BPESC1Q9GZL8 116 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 CSMD3Q7Z407 3707 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 SSC5DA1L4H1 1573 aa0.06□□□□□ -2.4
LTN1-204ENST00000475344 OVOS2A0A0J9YW53 1432 aa0.05□□□□□ -2.4
LTN1-204ENST00000475344 OVOS2Q6IE36 1432 aa0.05□□□□□ -2.4
LTN1-204ENST00000475344 COX4I1P13073 169 aa0.05□□□□□ -2.4
LTN1-204ENST00000475344 SSBP1Q04837 148 aaKnown RBP0.05□□□□□ -2.4
LTN1-204ENST00000475344 COX7B2Q8TF08 81 aa0.05□□□□□ -2.4
LTN1-204ENST00000475344 MYH8P13535 1937 aa0.05□□□□□ -2.4
LTN1-204ENST00000475344 PTPRQQ9UMZ3 2332 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 NCOR1O75376 2440 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 ABCA2Q9BZC7 2435 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 CDK13Q14004 1512 aaKnown RBP0.04□□□□□ -2.4
LTN1-204ENST00000475344 TRBV7-1A0A0A6YYK4 115 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 LOC105371267A0A1B0GV96 52 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 TSPAN19P0C672 248 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 PIRTP0C851 137 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 VSTM2AQ8TAG5 236 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 SAR1AQ9NR31 198 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 CEP152O94986 1710 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 DISP2A7MBM2 1401 aa0.04□□□□□ -2.4
LTN1-204ENST00000475344 C2CD3Q4AC94 2353 aa0.03□□□□□ -2.4
LTN1-204ENST00000475344 M0R2Z0 102 aa0.03□□□□□ -2.4
LTN1-204ENST00000475344 NMBP08949 121 aa0.03□□□□□ -2.4
LTN1-204ENST00000475344 Q5BKY6 102 aa0.03□□□□□ -2.4
LTN1-204ENST00000475344 CTAGE3PQ8IX95 158 aa0.03□□□□□ -2.4
LTN1-204ENST00000475344 SMIM11BQ8TCY0 68 aa0.03□□□□□ -2.4
LTN1-204ENST00000475344 LZICQ8WZA0 190 aa0.03□□□□□ -2.4
LTN1-204ENST00000475344 V9GYV3 84 aa0.03□□□□□ -2.4
LTN1-204ENST00000475344 LAMC3Q9Y6N6 1575 aa0.02□□□□□ -2.41
LTN1-204ENST00000475344 J3QR89 54 aa0.02□□□□□ -2.41
LTN1-204ENST00000475344 FAM74A4Q5TZK3 123 aa0.02□□□□□ -2.41
LTN1-204ENST00000475344 SLC48A1Q6P1K1 146 aa0.02□□□□□ -2.41
LTN1-204ENST00000475344 C10orf82Q8WW14 230 aa0.02□□□□□ -2.41
LTN1-204ENST00000475344 PRG4Q92954 1404 aaPredicted RBP0.02□□□□□ -2.41
LTN1-204ENST00000475344 AKAP6Q13023 2319 aa0.02□□□□□ -2.41
LTN1-204ENST00000475344 ADGRB1O14514 1584 aa0.02□□□□□ -2.41
LTN1-204ENST00000475344 FAM208BQ5VWN6 2430 aa0.02□□□□□ -2.41
LTN1-204ENST00000475344 TRGV1A0A0A0MS02 117 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 K7ERU9 68 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 SPINK1P00995 79 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 ACYP2P14621 99 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 UBE2G1P62253 170 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 COX6A2Q02221 97 aa0.01□□□□□ -2.41
LTN1-204ENST00000475344 ALX1Q15699 326 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms