RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 Q6ZR54 194 aa8.29□□□□□ -1.08
CLIP2-204ENST00000474962 OR10G8Q8NGN5 311 aa8.29□□□□□ -1.08
CLIP2-204ENST00000474962 ISOC2Q96AB3 205 aa8.29□□□□□ -1.08
CLIP2-204ENST00000474962 SFRP2Q96HF1 295 aa8.29□□□□□ -1.08
CLIP2-204ENST00000474962 C18orf15Q96N68 181 aa8.29□□□□□ -1.08
CLIP2-204ENST00000474962 MUC4Q99102 2169 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 DYNC1H1Q14204 4646 aaKnown RBP8.28□□□□□ -1.08
CLIP2-204ENST00000474962 TRAV4A0A0B4J268 109 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 TMEM238LA0A1B0GVL6 79 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 A8MWV9 139 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 CIDEAO60543 219 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 OR5AL1P0C617 328 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 SLAQ13239 276 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 CT83Q5H943 113 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 PIK3CD-AS1Q5SR53 167 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 BORCS7Q96B45 105 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 SCRT2Q9NQ03 307 aa8.28□□□□□ -1.08
CLIP2-204ENST00000474962 NACAE9PAV3 2078 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 MUC21A0A0G2JKD1 596 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 MUC21A0A140T8X8 626 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 SNAI2O43623 268 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 CACNG7P62955 275 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 OR10AG1Q8NH19 301 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 ZNF479Q96JC4 524 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 SSBP4Q9BWG4 385 aaPredicted RBP8.27□□□□□ -1.09
CLIP2-204ENST00000474962 SEC11CQ9BY50 192 aa8.27□□□□□ -1.09
CLIP2-204ENST00000474962 PPP1R2P9O14990 202 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 RS1O15537 224 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 NUDT3O95989 172 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 MT-ND4LP03901 98 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 CFAP126Q5VTH2 177 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 LYZL1Q6UWQ5 148 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 TSKUQ8WUA8 353 aa8.26□□□□□ -1.09
CLIP2-204ENST00000474962 DNAH11Q96DT5 4516 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 TRAV26-1A0A087WT03 109 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 IGHV3-73A0A0B4J1V6 119 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 A0A0J9YY99 117 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 PAX4O43316 350 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 FAM74A4Q5TZK3 123 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 C15orf53Q8NAA6 179 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 GFRA4Q9GZZ7 299 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 PRO0255Q9UI72 69 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 HHLA3Q9XRX5 114 aa8.25□□□□□ -1.09
CLIP2-204ENST00000474962 FAM231BA6NCW3 169 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 RHODO00212 210 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 TRGC1P0CF51 173 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 HOXA5P20719 270 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 FHL2Q14192 279 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 TWIST1Q15672 202 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 NDUFA5Q16718 116 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 C1orf134Q5TEV5 83 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 WDR73Q6P4I2 378 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 ZFP2Q6ZN57 461 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 PGLYRP4Q96LB8 373 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 AP1S3Q96PC3 154 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 V9GYV3 84 aa8.24□□□□□ -1.09
CLIP2-204ENST00000474962 A0A087WWL8 130 aa8.23□□□□□ -1.09
CLIP2-204ENST00000474962 HIGD1CA8MV81 97 aa8.23□□□□□ -1.09
CLIP2-204ENST00000474962 F5H697 171 aa8.23□□□□□ -1.09
CLIP2-204ENST00000474962 NTF3P20783 257 aa8.23□□□□□ -1.09
CLIP2-204ENST00000474962 PRADC1Q9BSG0 188 aa8.23□□□□□ -1.09
CLIP2-204ENST00000474962 JPT2Q9H910 190 aa8.23□□□□□ -1.09
CLIP2-204ENST00000474962 NAT8BQ9UHF3 227 aa8.23□□□□□ -1.09
CLIP2-204ENST00000474962 LINC00588Q9Y4M8 146 aa8.23□□□□□ -1.09
CLIP2-204ENST00000474962 A0A1B0GUT8 65 aa8.22□□□□□ -1.09
CLIP2-204ENST00000474962 NXPH4O95158 308 aa8.22□□□□□ -1.09
CLIP2-204ENST00000474962 CTRLP40313 264 aa8.22□□□□□ -1.09
CLIP2-204ENST00000474962 FOXA3P55318 350 aaPredicted RBP8.22□□□□□ -1.09
CLIP2-204ENST00000474962 FAM3BP58499 235 aaPredicted RBP8.22□□□□□ -1.09
CLIP2-204ENST00000474962 ZNF56Q15929 161 aa8.22□□□□□ -1.09
CLIP2-204ENST00000474962 C14orf178Q8N769 122 aaPredicted RBP8.22□□□□□ -1.09
CLIP2-204ENST00000474962 ZNRF2Q8NHG8 242 aa8.22□□□□□ -1.09
CLIP2-204ENST00000474962 GTSF1Q8WW33 167 aa8.22□□□□□ -1.09
CLIP2-204ENST00000474962 TRBV6-4A0A1B0GX49 114 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 H3BNG1 76 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 GATA1P15976 413 aaPredicted RBP8.21□□□□□ -1.1
CLIP2-204ENST00000474962 ADCYAP1P18509 176 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 CRYBA4P53673 196 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 RIGQ13278 110 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 RHOHQ15669 191 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 SAMD10Q9BYL1 202 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
CLIP2-204ENST00000474962 NBDYA0A0U1RRE5 68 aa8.2□□□□□ -1.1
CLIP2-204ENST00000474962 APOC3P02656 99 aa8.2□□□□□ -1.1
CLIP2-204ENST00000474962 CRYGDP07320 174 aa8.2□□□□□ -1.1
CLIP2-204ENST00000474962 MGPP08493 103 aa8.2□□□□□ -1.1
CLIP2-204ENST00000474962 GYPEP15421 78 aa8.2□□□□□ -1.1
CLIP2-204ENST00000474962 CCL18P55774 89 aa8.2□□□□□ -1.1
CLIP2-204ENST00000474962 MRPL23Q16540 153 aaKnown RBP8.2□□□□□ -1.1
CLIP2-204ENST00000474962 CNFNQ9BYD5 112 aa8.2□□□□□ -1.1
CLIP2-204ENST00000474962 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
CLIP2-204ENST00000474962 SMIM27A0A1W2PRY6 76 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 EVI2AP22794 236 aa8.19□□□□□ -1.1
CLIP2-204ENST00000474962 SRIP30626 198 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms