RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 F2Z2F3 143 aa12.93□□□□□ -0.34
CCDC171-206ENST00000474193 CT83Q5H943 113 aa12.93□□□□□ -0.34
CCDC171-206ENST00000474193 FRAS1Q86XX4 4008 aa12.92□□□□□ -0.34
CCDC171-206ENST00000474193 A8MWV9 139 aa12.92□□□□□ -0.34
CCDC171-206ENST00000474193 SNAI2O43623 268 aa12.92□□□□□ -0.34
CCDC171-206ENST00000474193 ESRGQ1W209 222 aa12.92□□□□□ -0.34
CCDC171-206ENST00000474193 ZNF575Q86XF7 245 aa12.92□□□□□ -0.34
CCDC171-206ENST00000474193 VSIG2Q96IQ7 327 aa12.92□□□□□ -0.34
CCDC171-206ENST00000474193 SSBP4Q9BWG4 385 aaPredicted RBP12.92□□□□□ -0.34
CCDC171-206ENST00000474193 MUC4Q99102 2169 aa12.91□□□□□ -0.34
CCDC171-206ENST00000474193 CIDEAO60543 219 aa12.91□□□□□ -0.34
CCDC171-206ENST00000474193 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
CCDC171-206ENST00000474193 SSTP61278 116 aa12.91□□□□□ -0.34
CCDC171-206ENST00000474193 CACNG7P62955 275 aa12.91□□□□□ -0.34
CCDC171-206ENST00000474193 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
CCDC171-206ENST00000474193 DMRTA1Q5VZB9 504 aa12.91□□□□□ -0.34
CCDC171-206ENST00000474193 C6orf223Q8N319 242 aa12.91□□□□□ -0.34
CCDC171-206ENST00000474193 SEC11CQ9BY50 192 aa12.91□□□□□ -0.34
CCDC171-206ENST00000474193 MRPS16Q9Y3D3 137 aaKnown RBP12.91□□□□□ -0.34
CCDC171-206ENST00000474193 A0A096LPF7 62 aa12.9□□□□□ -0.34
CCDC171-206ENST00000474193 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
CCDC171-206ENST00000474193 OR10AG1Q8NH19 301 aa12.9□□□□□ -0.34
CCDC171-206ENST00000474193 TSKUQ8WUA8 353 aa12.9□□□□□ -0.34
CCDC171-206ENST00000474193 BORCS7Q96B45 105 aa12.9□□□□□ -0.34
CCDC171-206ENST00000474193 UPK3BQ9BT76 320 aa12.9□□□□□ -0.34
CCDC171-206ENST00000474193 MUC21A0A0G2JKD1 596 aa12.89□□□□□ -0.35
CCDC171-206ENST00000474193 MUC21A0A140T8X8 626 aa12.89□□□□□ -0.35
CCDC171-206ENST00000474193 PPP1R2P9O14990 202 aa12.89□□□□□ -0.35
CCDC171-206ENST00000474193 RS1O15537 224 aa12.89□□□□□ -0.35
CCDC171-206ENST00000474193 CRYBA4P53673 196 aa12.89□□□□□ -0.35
CCDC171-206ENST00000474193 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
CCDC171-206ENST00000474193 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
CCDC171-206ENST00000474193 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
CCDC171-206ENST00000474193 FAM231BA6NCW3 169 aa12.88□□□□□ -0.35
CCDC171-206ENST00000474193 MT-ND4LP03901 98 aa12.88□□□□□ -0.35
CCDC171-206ENST00000474193 FHL2Q14192 279 aa12.88□□□□□ -0.35
CCDC171-206ENST00000474193 V9GYV3 84 aa12.88□□□□□ -0.35
CCDC171-206ENST00000474193 A0A1B0GVY2 172 aa12.87□□□□□ -0.35
CCDC171-206ENST00000474193 RHODO00212 210 aa12.87□□□□□ -0.35
CCDC171-206ENST00000474193 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
CCDC171-206ENST00000474193 WDR73Q6P4I2 378 aa12.87□□□□□ -0.35
CCDC171-206ENST00000474193 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
CCDC171-206ENST00000474193 PGLYRP4Q96LB8 373 aa12.87□□□□□ -0.35
CCDC171-206ENST00000474193 NXPH4O95158 308 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 ADCYAP1P18509 176 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 SRIP30626 198 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 CTRLP40313 264 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 NDUFA5Q16718 116 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 FAM74A4Q5TZK3 123 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 ZFP2Q6ZN57 461 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 GTSF1Q8WW33 167 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 ANAPC16Q96DE5 110 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 AP1S3Q96PC3 154 aa12.86□□□□□ -0.35
CCDC171-206ENST00000474193 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
CCDC171-206ENST00000474193 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
CCDC171-206ENST00000474193 SIVA1O15304 175 aa12.85□□□□□ -0.35
CCDC171-206ENST00000474193 TRGC1P0CF51 173 aa12.85□□□□□ -0.35
CCDC171-206ENST00000474193 BTF3P20290 206 aaKnown RBP12.85□□□□□ -0.35
CCDC171-206ENST00000474193 TWIST1Q15672 202 aa12.85□□□□□ -0.35
CCDC171-206ENST00000474193 SMIM15Q7Z3B0 74 aa12.85□□□□□ -0.35
CCDC171-206ENST00000474193 JPT2Q9H910 190 aa12.85□□□□□ -0.35
CCDC171-206ENST00000474193 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
CCDC171-206ENST00000474193 NTF3P20783 257 aa12.84□□□□□ -0.35
CCDC171-206ENST00000474193 FOXA3P55318 350 aaPredicted RBP12.84□□□□□ -0.35
CCDC171-206ENST00000474193 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
CCDC171-206ENST00000474193 A0A087WWL8 130 aa12.83□□□□□ -0.36
CCDC171-206ENST00000474193 SH2D6Q7Z4S9 175 aa12.83□□□□□ -0.36
CCDC171-206ENST00000474193 A0A1B0GUT8 65 aa12.82□□□□□ -0.36
CCDC171-206ENST00000474193 GYPEP15421 78 aa12.82□□□□□ -0.36
CCDC171-206ENST00000474193 LYPD5Q6UWN5 251 aa12.82□□□□□ -0.36
CCDC171-206ENST00000474193 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
CCDC171-206ENST00000474193 PRADC1Q9BSG0 188 aa12.82□□□□□ -0.36
CCDC171-206ENST00000474193 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
CCDC171-206ENST00000474193 SAMD10Q9BYL1 202 aa12.82□□□□□ -0.36
CCDC171-206ENST00000474193 CARHSP1Q9Y2V2 147 aaKnown RBP12.82□□□□□ -0.36
CCDC171-206ENST00000474193 DNAH2Q9P225 4427 aa12.81□□□□□ -0.36
CCDC171-206ENST00000474193 SMIM27A0A1W2PRY6 76 aa12.81□□□□□ -0.36
CCDC171-206ENST00000474193 F5H697 171 aa12.81□□□□□ -0.36
CCDC171-206ENST00000474193 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
CCDC171-206ENST00000474193 RIGQ13278 110 aa12.81□□□□□ -0.36
CCDC171-206ENST00000474193 C10orf91Q5T1B1 145 aa12.81□□□□□ -0.36
CCDC171-206ENST00000474193 NUP35Q8NFH5 326 aa12.81□□□□□ -0.36
CCDC171-206ENST00000474193 DNAH17Q9UFH2 4485 aa12.81□□□□□ -0.36
CCDC171-206ENST00000474193 TRBV6-4A0A1B0GX49 114 aa12.8□□□□□ -0.36
CCDC171-206ENST00000474193 K7EQD1 137 aa12.8□□□□□ -0.36
CCDC171-206ENST00000474193 CRYGDP07320 174 aa12.8□□□□□ -0.36
CCDC171-206ENST00000474193 TNP2Q05952 138 aa12.8□□□□□ -0.36
CCDC171-206ENST00000474193 ZNF56Q15929 161 aa12.8□□□□□ -0.36
CCDC171-206ENST00000474193 CTDSP1Q9GZU7 261 aa12.8□□□□□ -0.36
CCDC171-206ENST00000474193 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
CCDC171-206ENST00000474193 APOC3P02656 99 aa12.79□□□□□ -0.36
CCDC171-206ENST00000474193 RHOHQ15669 191 aa12.79□□□□□ -0.36
CCDC171-206ENST00000474193 SLC7A5P1Q8MH63 180 aa12.79□□□□□ -0.36
CCDC171-206ENST00000474193 SLC25A29Q8N8R3 303 aa12.79□□□□□ -0.36
CCDC171-206ENST00000474193 MGPP08493 103 aa12.78□□□□□ -0.36
CCDC171-206ENST00000474193 RAB4BP61018 213 aa12.78□□□□□ -0.36
CCDC171-206ENST00000474193 UFSP1Q6NVU6 142 aa12.78□□□□□ -0.36
CCDC171-206ENST00000474193 SVBPQ8N300 66 aa12.78□□□□□ -0.36
CCDC171-206ENST00000474193 DPH3P1Q9H4G8 78 aa12.78□□□□□ -0.36
CCDC171-206ENST00000474193 HECTD4Q9Y4D8 3996 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms