RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CEMP1Q6PRD7 247 aaPredicted RBP5.53□□□□□ -1.52
GPNMB-209ENST00000474157 LINC00305Q7Z4B0 112 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 SVILO95425 2214 aa5.53□□□□□ -1.52
GPNMB-209ENST00000474157 IGHV1-58A0A0C4DH39 117 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 LOC101059948A0A1B0GTJ6 334 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 LYRM9A8MSI8 78 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 Q6JHZ5 121 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 SLC25A29Q8N8R3 303 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 UBALD1Q8TB05 177 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 SPTSSAQ969W0 71 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 TMEM243Q9BU79 118 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 TIMM8BQ9Y5J9 83 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-209ENST00000474157 APCP25054 2843 aa5.52□□□□□ -1.53
GPNMB-209ENST00000474157 NIPBLQ6KC79 2804 aaeCLIP5.51□□□□□ -1.53
GPNMB-209ENST00000474157 TRBV7-1A0A0A6YYK4 115 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 SPTY2D1-AS1A0A0U1RR47 76 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 NDUFB3O43676 98 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 TCRAP04437 139 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 S100A7L2Q5SY68 101 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 SERTAD4-AS1Q5TG53 156 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 SCGB1D4Q6XE38 83 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 ZNF329Q86UD4 541 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 TSACCQ96A04 125 aaPredicted RBP5.51□□□□□ -1.53
GPNMB-209ENST00000474157 FOXC2Q99958 501 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 EMC6Q9BV81 110 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 C11orf21Q9P2W6 132 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 COL27A1Q8IZC6 1860 aaPredicted RBP5.51□□□□□ -1.53
GPNMB-209ENST00000474157 UNC13CQ8NB66 2214 aa5.51□□□□□ -1.53
GPNMB-209ENST00000474157 ESPL1Q14674 2120 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 TRAV40A0A0B4J280 105 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 CCL4P13236 92 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 PIK3CD-AS1Q5SR53 167 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 MIR17HGQ75NE6 70 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 MKXQ8IYA7 352 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 SPATA3Q8NHX4 192 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 CSMD2Q7Z408 3487 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 MED13LQ71F56 2210 aa5.5□□□□□ -1.53
GPNMB-209ENST00000474157 HEATR5BQ9P2D3 2071 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 TRAV3A0A0B4J244 114 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 H7C423 109 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 COX7A2P2O60397 106 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 IGKV1D-16P01601 117 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 IGHV3-30P01768 117 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 IGHV3-30-5P0DP03 117 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 LGALS3P17931 250 aaKnown RBP5.49□□□□□ -1.53
GPNMB-209ENST00000474157 DUTP33316 252 aaKnown RBP5.49□□□□□ -1.53
GPNMB-209ENST00000474157 CKS2P33552 79 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 ZNF137PP52743 207 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 RPS21P63220 83 aaKnown RBP5.49□□□□□ -1.53
GPNMB-209ENST00000474157 FAM222AQ5U5X8 452 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 IGFL2Q6UWQ7 119 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 NFAM1Q8NET5 270 aaPredicted RBP5.49□□□□□ -1.53
GPNMB-209ENST00000474157 CCL4L1Q8NHW4 92 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 ZNF714Q96N38 554 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 MSRB1Q9NZV6 116 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 Q9UF83 564 aa5.49□□□□□ -1.53
GPNMB-209ENST00000474157 SPTBP11277 2137 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 IGKV1-6A0A0C4DH72 117 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 TRBV10-3A0A0K0K1G6 114 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 ZNF815PA8K554 130 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 D6R8Y8 96 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 USP17L23D6RBM5 183 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 NDUFS5O43920 106 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 SS18L1O75177 396 aaPredicted RBP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 SUB1P53999 127 aaKnown RBP eCLIP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 DAZ2Q13117 558 aaKnown RBP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 ORMDL2Q53FV1 153 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 ATP1A1-AS1Q5TC04 95 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 C9orf139Q6ZV77 190 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 FP248Q71RG6 208 aaPredicted RBP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 DAZ4Q86SG3 579 aaKnown RBP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 WFDC11Q8NEX6 87 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 NUP37Q8NFH4 326 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 DCANP1Q8TF63 244 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 TMEM263Q8WUH6 116 aaKnown RBP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 SRSF12Q8WXF0 261 aaKnown RBP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 LYZL4Q96KX0 146 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 DAZ3Q9NR90 486 aaKnown RBP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 MRPL35Q9NZE8 188 aaKnown RBP5.48□□□□□ -1.53
GPNMB-209ENST00000474157 HIVEP3Q5T1R4 2406 aa5.48□□□□□ -1.53
GPNMB-209ENST00000474157 AKAP9Q99996 3911 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 PCNX3Q9H6A9 2034 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 TRAV41A0A0B4J266 112 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 IGKV1-8A0A0C4DH67 115 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 A0A0J9YY99 117 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 RBMY1BA6NDE4 496 aaKnown RBP5.47□□□□□ -1.53
GPNMB-209ENST00000474157 RBMY1EA6NEQ0 496 aaKnown RBP5.47□□□□□ -1.53
GPNMB-209ENST00000474157 LST1O00453 97 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 IGF1P05019 195 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 RBMY1DP0C7P1 496 aaKnown RBP5.47□□□□□ -1.53
GPNMB-209ENST00000474157 RBMY1A1P0DJD3 496 aaKnown RBP5.47□□□□□ -1.53
GPNMB-209ENST00000474157 RBMY1CP0DJD4 496 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 COX6B1P14854 86 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 HOXD3P31249 432 aaPredicted RBP5.47□□□□□ -1.53
GPNMB-209ENST00000474157 KLKP1Q107X0 134 aa5.47□□□□□ -1.53
GPNMB-209ENST00000474157 EIF4EBP1Q13541 118 aaPredicted RBP5.47□□□□□ -1.53
GPNMB-209ENST00000474157 RBMY1FQ15415 496 aaKnown RBP5.47□□□□□ -1.53
GPNMB-209ENST00000474157 PATE1Q8WXA2 126 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms