RNA–Protein interactions for RNA: ENST00000472856.1

SOX2-OT-205, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 454 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-205ENST00000472856 C5orf38Q86SI9 138 aa3.17□□□□□ -1.9
SOX2-OT-205ENST00000472856 C10orf82Q8WW14 230 aa3.17□□□□□ -1.9
SOX2-OT-205ENST00000472856 CC2D2AQ9P2K1 1620 aa3.17□□□□□ -1.9
SOX2-OT-205ENST00000472856 BAHCC1Q9P281 2608 aa3.16□□□□□ -1.9
SOX2-OT-205ENST00000472856 M0R2N4 97 aa3.16□□□□□ -1.9
SOX2-OT-205ENST00000472856 NDUFA11Q86Y39 141 aa3.16□□□□□ -1.9
SOX2-OT-205ENST00000472856 ARFGEF3Q5TH69 2177 aa3.16□□□□□ -1.9
SOX2-OT-205ENST00000472856 CPSF1Q10570 1443 aaKnown RBP3.16□□□□□ -1.9
SOX2-OT-205ENST00000472856 TRAV12-3A0A0B4J271 114 aa3.15□□□□□ -1.91
SOX2-OT-205ENST00000472856 TRBV10-3A0A0K0K1G6 114 aa3.15□□□□□ -1.91
SOX2-OT-205ENST00000472856 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
SOX2-OT-205ENST00000472856 TMEM262E9PQX1 116 aa3.15□□□□□ -1.91
SOX2-OT-205ENST00000472856 CCKP06307 115 aa3.15□□□□□ -1.91
SOX2-OT-205ENST00000472856 ANKRD26Q9UPS8 1709 aa3.15□□□□□ -1.91
SOX2-OT-205ENST00000472856 IFT140Q96RY7 1462 aa3.15□□□□□ -1.91
SOX2-OT-205ENST00000472856 CDK12Q9NYV4 1490 aaPredicted RBP3.15□□□□□ -1.91
SOX2-OT-205ENST00000472856 DPH3P1Q9H4G8 78 aa3.14□□□□□ -1.91
SOX2-OT-205ENST00000472856 ARAP2Q8WZ64 1704 aa3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 INTS1Q8N201 2190 aaKnown RBP3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 LOC110117498A0A087WWA1 95 aa3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 UBE2L5PA0A1B0GUS4 154 aa3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 IL9P15248 144 aa3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 RPL37AP61513 92 aaKnown RBP3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 UBE2L3P68036 154 aaKnown RBP3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 SPATA45Q537H7 98 aa3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 SBSPONQ8IVN8 264 aa3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 NWD2Q9ULI1 1742 aa3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 MYH8P13535 1937 aa3.13□□□□□ -1.91
SOX2-OT-205ENST00000472856 VWDEQ8N2E2 1590 aa3.12□□□□□ -1.91
SOX2-OT-205ENST00000472856 TRBV6-7A0A0A0MS04 114 aa3.12□□□□□ -1.91
SOX2-OT-205ENST00000472856 ATP5EP56381 51 aaPredicted RBP3.12□□□□□ -1.91
SOX2-OT-205ENST00000472856 ADGRB2O60241 1585 aa3.12□□□□□ -1.91
SOX2-OT-205ENST00000472856 RB1CC1Q8TDY2 1594 aa3.12□□□□□ -1.91
SOX2-OT-205ENST00000472856 DOCK1Q14185 1865 aa3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 ZNF142P52746 1687 aaPredicted RBP3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 RAPGEF2Q9Y4G8 1499 aa3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 RBAKDNA6NC62 111 aa3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 HIGD1CA8MV81 97 aa3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 SNCAP37840 140 aa3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 DCDP81605 110 aaKnown RBP3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 PATJQ8NI35 1801 aa3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 ZGRF1Q86YA3 2104 aa3.11□□□□□ -1.91
SOX2-OT-205ENST00000472856 ABCA3Q99758 1704 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 PCNX2A6NKB5 2137 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 TRAV13-2A0A0B4J235 113 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 KRTAP10-10P60014 251 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 GDF5OSQ5U4N7 250 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 CYP2G1PQ6ZSU1 146 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 COMMD6Q7Z4G1 85 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 ZNF563Q8TA94 476 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 PHRF1Q9P1Y6 1649 aaKnown RBP3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 C10orf71Q711Q0 1435 aa3.1□□□□□ -1.91
SOX2-OT-205ENST00000472856 ARHGAP5Q13017 1502 aa3.09□□□□□ -1.91
SOX2-OT-205ENST00000472856 HCG22E2RYF7 251 aa3.09□□□□□ -1.91
SOX2-OT-205ENST00000472856 SSSCA1O60232 199 aa3.09□□□□□ -1.91
SOX2-OT-205ENST00000472856 DLEC1Q9Y238 1755 aa3.09□□□□□ -1.91
SOX2-OT-205ENST00000472856 LOC101927531A0A1B0GV80 90 aa3.08□□□□□ -1.92
SOX2-OT-205ENST00000472856 PVALEFA0A1B0GWK0 134 aa3.08□□□□□ -1.92
SOX2-OT-205ENST00000472856 UBA52P62987 128 aaKnown RBP3.08□□□□□ -1.92
SOX2-OT-205ENST00000472856 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
SOX2-OT-205ENST00000472856 Q9H521 79 aa3.08□□□□□ -1.92
SOX2-OT-205ENST00000472856 CCL8P80075 99 aa3.07□□□□□ -1.92
SOX2-OT-205ENST00000472856 OBSCN-AS1Q96MR7 158 aa3.07□□□□□ -1.92
SOX2-OT-205ENST00000472856 AP4S1Q9Y587 144 aa3.07□□□□□ -1.92
SOX2-OT-205ENST00000472856 COL4A4P53420 1690 aaPredicted RBP3.07□□□□□ -1.92
SOX2-OT-205ENST00000472856 TNS1Q9HBL0 1735 aaKnown RBP3.07□□□□□ -1.92
SOX2-OT-205ENST00000472856 UNQ6190/PRO20217Q6UXQ8 127 aa3.06□□□□□ -1.92
SOX2-OT-205ENST00000472856 C4orf33Q8N1A6 199 aa3.06□□□□□ -1.92
SOX2-OT-205ENST00000472856 RREB1Q92766 1687 aa3.06□□□□□ -1.92
SOX2-OT-205ENST00000472856 AMELYQ99218 206 aa3.06□□□□□ -1.92
SOX2-OT-205ENST00000472856 DPY30Q9C005 99 aa3.06□□□□□ -1.92
SOX2-OT-205ENST00000472856 PHIPQ8WWQ0 1821 aa3.05□□□□□ -1.92
SOX2-OT-205ENST00000472856 KDM6BO15054 1643 aa3.05□□□□□ -1.92
SOX2-OT-205ENST00000472856 SCAPERQ9BY12 1400 aa3.05□□□□□ -1.92
SOX2-OT-205ENST00000472856 IGKV3D-7A0A0C4DH55 119 aa3.05□□□□□ -1.92
SOX2-OT-205ENST00000472856 IGKV3OR2-268A0A0C4DH90 116 aa3.05□□□□□ -1.92
SOX2-OT-205ENST00000472856 FXYD4P59646 89 aa3.05□□□□□ -1.92
SOX2-OT-205ENST00000472856 CASKIN1Q8WXD9 1431 aa3.04□□□□□ -1.92
SOX2-OT-205ENST00000472856 H3BQ15 152 aa3.04□□□□□ -1.92
SOX2-OT-205ENST00000472856 MT-ATP8P03928 68 aa3.04□□□□□ -1.92
SOX2-OT-205ENST00000472856 UBE2D1P51668 147 aa3.04□□□□□ -1.92
SOX2-OT-205ENST00000472856 ZCCHC13Q8WW36 166 aaKnown RBP3.04□□□□□ -1.92
SOX2-OT-205ENST00000472856 SNRNP200O75643 2136 aaKnown RBP3.04□□□□□ -1.92
SOX2-OT-205ENST00000472856 NRXN2Q9P2S2 1712 aa3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 TEX49A0A1B0GTD5 131 aa3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 IGKV2-29A2NJV5 120 aaPredicted RBP3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 SIX6O95475 246 aa3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 LINC00032P0C843 101 aa3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 ZNF818PQ6ZRF7 136 aa3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 MYOZ3Q8TDC0 251 aa3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 LINC00474Q9P2X8 69 aa3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 SHROOM2Q13796 1616 aa3.03□□□□□ -1.92
SOX2-OT-205ENST00000472856 TEX14Q8IWB6 1497 aa3.03□□□□□ -1.93
SOX2-OT-205ENST00000472856 COL5A1P20908 1838 aaPredicted RBP3.03□□□□□ -1.93
SOX2-OT-205ENST00000472856 PARP14Q460N5 1801 aa3.03□□□□□ -1.93
SOX2-OT-205ENST00000472856 TET1Q8NFU7 2136 aa3.02□□□□□ -1.93
SOX2-OT-205ENST00000472856 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
SOX2-OT-205ENST00000472856 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
SOX2-OT-205ENST00000472856 VAMP8Q9BV40 100 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms