RNA–Protein interactions for RNA: ENST00000472856.1

SOX2-OT-205, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 454 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-205ENST00000472856 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
SOX2-OT-205ENST00000472856 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
SOX2-OT-205ENST00000472856 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
SOX2-OT-205ENST00000472856 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
SOX2-OT-205ENST00000472856 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
SOX2-OT-205ENST00000472856 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.37
SOX2-OT-205ENST00000472856 FOXD1Q16676 465 aa17.16■□□□□ 0.34
SOX2-OT-205ENST00000472856 KCNA4P22459 653 aa16.98■□□□□ 0.31
SOX2-OT-205ENST00000472856 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
SOX2-OT-205ENST00000472856 ADRA2BP18089 450 aa16.84■□□□□ 0.29
SOX2-OT-205ENST00000472856 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
SOX2-OT-205ENST00000472856 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
SOX2-OT-205ENST00000472856 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-205ENST00000472856 SLC24A1O60721 1099 aa16.21■□□□□ 0.19
SOX2-OT-205ENST00000472856 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
SOX2-OT-205ENST00000472856 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
SOX2-OT-205ENST00000472856 RTN4Q9NQC3 1192 aaKnown RBP15.76■□□□□ 0.11
SOX2-OT-205ENST00000472856 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
SOX2-OT-205ENST00000472856 MSH5O43196 834 aa15.64■□□□□ 0.09
SOX2-OT-205ENST00000472856 ZBTB22O15209 634 aa15.63■□□□□ 0.09
SOX2-OT-205ENST00000472856 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
SOX2-OT-205ENST00000472856 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
SOX2-OT-205ENST00000472856 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
SOX2-OT-205ENST00000472856 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
SOX2-OT-205ENST00000472856 MAPK8IP2Q13387 824 aaPredicted RBP15.16■□□□□ 0.02
SOX2-OT-205ENST00000472856 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
SOX2-OT-205ENST00000472856 FKBP8Q14318 412 aa14.91□□□□□ -0.02
SOX2-OT-205ENST00000472856 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
SOX2-OT-205ENST00000472856 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
SOX2-OT-205ENST00000472856 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-205ENST00000472856 ATXN8OSP0DMR3 200 aa14.53□□□□□ -0.08
SOX2-OT-205ENST00000472856 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
SOX2-OT-205ENST00000472856 PLCB2Q00722 1185 aa14.42□□□□□ -0.1
SOX2-OT-205ENST00000472856 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
SOX2-OT-205ENST00000472856 PRKCSHP14314 528 aaPredicted RBP14.35□□□□□ -0.11
SOX2-OT-205ENST00000472856 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-205ENST00000472856 BCANQ96GW7 911 aa14.29□□□□□ -0.12
SOX2-OT-205ENST00000472856 TAOK2Q9UL54 1235 aa14.19□□□□□ -0.14
SOX2-OT-205ENST00000472856 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
SOX2-OT-205ENST00000472856 DCAF8L2P0C7V8 631 aa14.06□□□□□ -0.16
SOX2-OT-205ENST00000472856 VSIG10Q8N0Z9 540 aa14.03□□□□□ -0.16
SOX2-OT-205ENST00000472856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.17
SOX2-OT-205ENST00000472856 TPRNQ4KMQ1 711 aa13.99□□□□□ -0.17
SOX2-OT-205ENST00000472856 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
SOX2-OT-205ENST00000472856 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-205ENST00000472856 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
SOX2-OT-205ENST00000472856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-205ENST00000472856 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-205ENST00000472856 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
SOX2-OT-205ENST00000472856 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
SOX2-OT-205ENST00000472856 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
SOX2-OT-205ENST00000472856 PKD2Q13563 968 aa13.72□□□□□ -0.21
SOX2-OT-205ENST00000472856 FBLN2P98095 1184 aa13.71□□□□□ -0.21
SOX2-OT-205ENST00000472856 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-205ENST00000472856 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
SOX2-OT-205ENST00000472856 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
SOX2-OT-205ENST00000472856 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-205ENST00000472856 BBXQ8WY36 941 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-205ENST00000472856 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
SOX2-OT-205ENST00000472856 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
SOX2-OT-205ENST00000472856 PROM2Q8N271 834 aa13.57□□□□□ -0.24
SOX2-OT-205ENST00000472856 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
SOX2-OT-205ENST00000472856 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
SOX2-OT-205ENST00000472856 APLP2Q06481 763 aa13.56□□□□□ -0.24
SOX2-OT-205ENST00000472856 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-205ENST00000472856 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
SOX2-OT-205ENST00000472856 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
SOX2-OT-205ENST00000472856 ARXQ96QS3 562 aa13.46□□□□□ -0.25
SOX2-OT-205ENST00000472856 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
SOX2-OT-205ENST00000472856 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
SOX2-OT-205ENST00000472856 GTF3C3Q9Y5Q9 886 aa13.44□□□□□ -0.26
SOX2-OT-205ENST00000472856 ECM2O94769 699 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-205ENST00000472856 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-205ENST00000472856 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
SOX2-OT-205ENST00000472856 NBR1Q14596 966 aa13.38□□□□□ -0.27
SOX2-OT-205ENST00000472856 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
SOX2-OT-205ENST00000472856 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
SOX2-OT-205ENST00000472856 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-205ENST00000472856 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-205ENST00000472856 ERICH6Q7L0X2 663 aa13.31□□□□□ -0.28
SOX2-OT-205ENST00000472856 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-205ENST00000472856 RGL2O15211 777 aa13.26□□□□□ -0.29
SOX2-OT-205ENST00000472856 CAPN15O75808 1086 aa13.23□□□□□ -0.29
SOX2-OT-205ENST00000472856 POLA2Q14181 598 aa13.18□□□□□ -0.3
SOX2-OT-205ENST00000472856 HOMEZQ8IX15 550 aa13.17□□□□□ -0.3
SOX2-OT-205ENST00000472856 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
SOX2-OT-205ENST00000472856 CHGAP10645 457 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-205ENST00000472856 TMEM132AQ24JP5 1023 aa13.14□□□□□ -0.31
SOX2-OT-205ENST00000472856 C14orf37Q86TY3 774 aa13.07□□□□□ -0.32
SOX2-OT-205ENST00000472856 ABCB7O75027 752 aa13.03□□□□□ -0.32
SOX2-OT-205ENST00000472856 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
SOX2-OT-205ENST00000472856 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-205ENST00000472856 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
SOX2-OT-205ENST00000472856 DSG3P32926 999 aa12.96□□□□□ -0.33
SOX2-OT-205ENST00000472856 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
SOX2-OT-205ENST00000472856 HS6ST3Q8IZP7 471 aa12.91□□□□□ -0.34
SOX2-OT-205ENST00000472856 MIER1Q8N108 512 aa12.9□□□□□ -0.34
SOX2-OT-205ENST00000472856 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
SOX2-OT-205ENST00000472856 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
SOX2-OT-205ENST00000472856 NKX1-1Q15270 411 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms